RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 IGKV2-28A0A075B6P5 120 aa12.78□□□□□ -0.36
PTPRU-203ENST00000415600 TRAV13-2A0A0B4J235 113 aa12.78□□□□□ -0.36
PTPRU-203ENST00000415600 IGKV2D-28P01615 120 aa12.78□□□□□ -0.36
PTPRU-203ENST00000415600 RNF151Q2KHN1 245 aa12.77□□□□□ -0.36
PTPRU-203ENST00000415600 TRBV20-1A0A075B6N2 111 aa12.77□□□□□ -0.37
PTPRU-203ENST00000415600 TRIAP1O43715 76 aa12.77□□□□□ -0.37
PTPRU-203ENST00000415600 SCGB1C2P0DMR2 95 aa12.77□□□□□ -0.37
PTPRU-203ENST00000415600 REG3GQ6UW15 175 aa12.77□□□□□ -0.37
PTPRU-203ENST00000415600 SPINK6Q6UWN8 80 aa12.77□□□□□ -0.37
PTPRU-203ENST00000415600 MT1HL1P0DM35 61 aa12.76□□□□□ -0.37
PTPRU-203ENST00000415600 RPL18AQ02543 176 aaKnown RBP12.76□□□□□ -0.37
PTPRU-203ENST00000415600 NDUFC2O95298 119 aa12.75□□□□□ -0.37
PTPRU-203ENST00000415600 LINC00337Q8N6G1 96 aa12.75□□□□□ -0.37
PTPRU-203ENST00000415600 H3BMG7 143 aa12.74□□□□□ -0.37
PTPRU-203ENST00000415600 TCL1BO95988 128 aa12.74□□□□□ -0.37
PTPRU-203ENST00000415600 COX6CP09669 75 aa12.73□□□□□ -0.37
PTPRU-203ENST00000415600 LINC01600Q96MT4 127 aa12.72□□□□□ -0.37
PTPRU-203ENST00000415600 F8W1H4 67 aa12.69□□□□□ -0.38
PTPRU-203ENST00000415600 RPL28P46779 137 aaKnown RBP12.69□□□□□ -0.38
PTPRU-203ENST00000415600 ATXN8Q156A1 80 aa12.68□□□□□ -0.38
PTPRU-203ENST00000415600 PRO0461Q9UI25 63 aa12.68□□□□□ -0.38
PTPRU-203ENST00000415600 HMCN2Q8NDA2 5059 aa12.67□□□□□ -0.38
PTPRU-203ENST00000415600 A0A1W2PNN7 141 aa12.67□□□□□ -0.38
PTPRU-203ENST00000415600 NDUFC2-KCTD14E9PQ53 114 aa12.67□□□□□ -0.38
PTPRU-203ENST00000415600 Q8NDZ9 215 aa12.65□□□□□ -0.38
PTPRU-203ENST00000415600 TLX1NBP0CAT3 122 aa12.64□□□□□ -0.39
PTPRU-203ENST00000415600 OR13C6PQ8NH95 151 aa12.64□□□□□ -0.39
PTPRU-203ENST00000415600 SMIM11BQ8TCY0 68 aa12.64□□□□□ -0.39
PTPRU-203ENST00000415600 LST1O00453 97 aa12.63□□□□□ -0.39
PTPRU-203ENST00000415600 XAGE1AQ9HD64 81 aa12.63□□□□□ -0.39
PTPRU-203ENST00000415600 CLEC2BQ92478 149 aa12.62□□□□□ -0.39
PTPRU-203ENST00000415600 TMEM126AQ9H061 195 aa12.62□□□□□ -0.39
PTPRU-203ENST00000415600 TRBV10-2A0A0K0K1G8 114 aa12.61□□□□□ -0.39
PTPRU-203ENST00000415600 MTURNQ8N3F0 131 aa12.61□□□□□ -0.39
PTPRU-203ENST00000415600 PSORS1C2Q9UIG4 136 aa12.61□□□□□ -0.39
PTPRU-203ENST00000415600 NCR3O14931 201 aa12.6□□□□□ -0.39
PTPRU-203ENST00000415600 C1orf137Q5JT78 98 aa12.6□□□□□ -0.39
PTPRU-203ENST00000415600 SMCPP49901 116 aaPredicted RBP12.6□□□□□ -0.39
PTPRU-203ENST00000415600 GAGE2EQ4V326 116 aa12.6□□□□□ -0.39
PTPRU-203ENST00000415600 PHF5AQ7RTV0 110 aaKnown RBP12.6□□□□□ -0.39
PTPRU-203ENST00000415600 GAGE2DQ9UEU5 116 aa12.6□□□□□ -0.39
PTPRU-203ENST00000415600 C9JAW5 83 aa12.58□□□□□ -0.4
PTPRU-203ENST00000415600 VPREB1P12018 145 aa12.57□□□□□ -0.4
PTPRU-203ENST00000415600 H0YGX0 51 aa12.56□□□□□ -0.4
PTPRU-203ENST00000415600 S100A7L2Q5SY68 101 aa12.56□□□□□ -0.4
PTPRU-203ENST00000415600 FAM19A5Q7Z5A7 132 aaPredicted RBP12.56□□□□□ -0.4
PTPRU-203ENST00000415600 M0QXV9 152 aa12.56□□□□□ -0.4
PTPRU-203ENST00000415600 SLC25A20O43772 301 aa12.56□□□□□ -0.4
PTPRU-203ENST00000415600 DIRC1Q969H9 104 aa12.56□□□□□ -0.4
PTPRU-203ENST00000415600 TNXBP22105 4242 aa12.55□□□□□ -0.4
PTPRU-203ENST00000415600 IGLV6-57P01721 117 aa12.55□□□□□ -0.4
PTPRU-203ENST00000415600 KRTAP10-8P60410 259 aa12.55□□□□□ -0.4
PTPRU-203ENST00000415600 TRACP01848 142 aa12.54□□□□□ -0.4
PTPRU-203ENST00000415600 UBE2BP63146 152 aa12.54□□□□□ -0.4
PTPRU-203ENST00000415600 C9orf129Q5T035 196 aaKnown RBP12.54□□□□□ -0.4
PTPRU-203ENST00000415600 FAM218AQ96MZ4 157 aa12.53□□□□□ -0.4
PTPRU-203ENST00000415600 FAM168BA1KXE4 195 aa12.52□□□□□ -0.4
PTPRU-203ENST00000415600 IGLV7-43P04211 117 aa12.52□□□□□ -0.4
PTPRU-203ENST00000415600 ETDBQ3ZM63 59 aa12.52□□□□□ -0.4
PTPRU-203ENST00000415600 OCIAD2Q56VL3 154 aa12.52□□□□□ -0.41
PTPRU-203ENST00000415600 M0R378 163 aa12.51□□□□□ -0.41
PTPRU-203ENST00000415600 ANKRD29Q8N6D5 301 aa12.51□□□□□ -0.41
PTPRU-203ENST00000415600 H3BT86 120 aa12.5□□□□□ -0.41
PTPRU-203ENST00000415600 TRBV10-3A0A0K0K1G6 114 aa12.49□□□□□ -0.41
PTPRU-203ENST00000415600 TEN1Q86WV5 123 aa12.47□□□□□ -0.41
PTPRU-203ENST00000415600 C6orf99Q4VX62 202 aa12.47□□□□□ -0.41
PTPRU-203ENST00000415600 UBR4Q5T4S7 5183 aa12.46□□□□□ -0.41
PTPRU-203ENST00000415600 K7ERU9 68 aa12.46□□□□□ -0.42
PTPRU-203ENST00000415600 IGLV5-37A0A075B6J1 123 aa12.45□□□□□ -0.42
PTPRU-203ENST00000415600 TRAV23DV6A0A075B6W5 121 aa12.45□□□□□ -0.42
PTPRU-203ENST00000415600 H0Y9J4 135 aa12.45□□□□□ -0.42
PTPRU-203ENST00000415600 CBY1Q9Y3M2 126 aa12.45□□□□□ -0.42
PTPRU-203ENST00000415600 A0A1B0GX51 115 aa12.44□□□□□ -0.42
PTPRU-203ENST00000415600 NKAPP1Q8N9T2 125 aa12.43□□□□□ -0.42
PTPRU-203ENST00000415600 DNAL4O96015 105 aa12.42□□□□□ -0.42
PTPRU-203ENST00000415600 IGLV1-50A0A075B6I6 118 aa12.4□□□□□ -0.42
PTPRU-203ENST00000415600 PPDPFLQ8WWR9 84 aa12.4□□□□□ -0.42
PTPRU-203ENST00000415600 TRBV7-6A0A0J9YX20 115 aa12.39□□□□□ -0.43
PTPRU-203ENST00000415600 ZNF73O43830 326 aaPredicted RBP12.39□□□□□ -0.43
PTPRU-203ENST00000415600 KRTAP11-1Q8IUC1 163 aa12.39□□□□□ -0.43
PTPRU-203ENST00000415600 KRTAP7-1Q8IUC3 87 aa12.39□□□□□ -0.43
PTPRU-203ENST00000415600 LINC00167Q96N53 147 aa12.39□□□□□ -0.43
PTPRU-203ENST00000415600 J3QR89 54 aa12.39□□□□□ -0.43
PTPRU-203ENST00000415600 BAALC-AS2P0C853 105 aa12.39□□□□□ -0.43
PTPRU-203ENST00000415600 LINC00575Q6W349 94 aa12.38□□□□□ -0.43
PTPRU-203ENST00000415600 C22orf24Q9Y442 160 aa12.38□□□□□ -0.43
PTPRU-203ENST00000415600 PRR26Q8N8Z3 221 aa12.37□□□□□ -0.43
PTPRU-203ENST00000415600 SNCGO76070 127 aa12.36□□□□□ -0.43
PTPRU-203ENST00000415600 KCNQ1DNQ9H478 68 aa12.35□□□□□ -0.43
PTPRU-203ENST00000415600 ZNF861PO60384 105 aa12.35□□□□□ -0.43
PTPRU-203ENST00000415600 ELOF1P60002 83 aaKnown RBP12.35□□□□□ -0.43
PTPRU-203ENST00000415600 COX7BP24311 80 aa12.34□□□□□ -0.43
PTPRU-203ENST00000415600 MRPL55Q7Z7F7 128 aaKnown RBP12.34□□□□□ -0.43
PTPRU-203ENST00000415600 ORMDL1Q9P0S3 153 aa12.33□□□□□ -0.44
PTPRU-203ENST00000415600 LRP2P98164 4655 aa12.33□□□□□ -0.44
PTPRU-203ENST00000415600 hADV29S1A0JD25 119 aa12.32□□□□□ -0.44
PTPRU-203ENST00000415600 TEX49A0A1B0GTD5 131 aa12.31□□□□□ -0.44
PTPRU-203ENST00000415600 PRYO14603 147 aa12.31□□□□□ -0.44
PTPRU-203ENST00000415600 KRTAP1-4P0C5Y4 121 aa12.28□□□□□ -0.44
PTPRU-203ENST00000415600 RPL37AP8A6NKH3 93 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms