RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 PLA2G2DQ9UNK4 145 aa9.06□□□□□ -0.96
SMARCA4-202ENST00000413806 Q5XG85 94 aa9.05□□□□□ -0.96
SMARCA4-202ENST00000413806 TLX1NBP0CAT3 122 aa9.04□□□□□ -0.96
SMARCA4-202ENST00000413806 FAM229AH3BQW9 127 aa9.04□□□□□ -0.96
SMARCA4-202ENST00000413806 TYMSOSQ8TAI1 123 aa9.04□□□□□ -0.96
SMARCA4-202ENST00000413806 C9orf129Q5T035 196 aaKnown RBP9.03□□□□□ -0.96
SMARCA4-202ENST00000413806 KRTAP10-11P60412 298 aa9.02□□□□□ -0.96
SMARCA4-202ENST00000413806 IGFL1Q6UW32 110 aa9.02□□□□□ -0.97
SMARCA4-202ENST00000413806 SPANXA2-OT1Q8N9U9 137 aa9.02□□□□□ -0.97
SMARCA4-202ENST00000413806 FASNP49327 2511 aaKnown RBP9.02□□□□□ -0.97
SMARCA4-202ENST00000413806 KRTAP10-3P60369 221 aa9□□□□□ -0.97
SMARCA4-202ENST00000413806 Q8N377 158 aa9□□□□□ -0.97
SMARCA4-202ENST00000413806 APLNQ9ULZ1 77 aa9□□□□□ -0.97
SMARCA4-202ENST00000413806 C8orf17Q9NRJ1 99 aa8.99□□□□□ -0.97
SMARCA4-202ENST00000413806 ANKRD17O75179 2603 aaKnown RBP8.99□□□□□ -0.97
SMARCA4-202ENST00000413806 CENPFP49454 3210 aa8.99□□□□□ -0.97
SMARCA4-202ENST00000413806 K7EIL1 84 aa8.96□□□□□ -0.97
SMARCA4-202ENST00000413806 SETD2Q9BYW2 2564 aaPredicted RBP8.96□□□□□ -0.97
SMARCA4-202ENST00000413806 Q96NJ1 140 aa8.96□□□□□ -0.98
SMARCA4-202ENST00000413806 WWC2-AS2Q96NR7 200 aa8.94□□□□□ -0.98
SMARCA4-202ENST00000413806 LINC01554Q52M75 96 aa8.94□□□□□ -0.98
SMARCA4-202ENST00000413806 PKD1L2Q7Z442 2459 aa8.94□□□□□ -0.98
SMARCA4-202ENST00000413806 OBSCN-AS1Q96MR7 158 aa8.92□□□□□ -0.98
SMARCA4-202ENST00000413806 ZNF575Q86XF7 245 aa8.92□□□□□ -0.98
SMARCA4-202ENST00000413806 SPTBN4Q9H254 2564 aa8.91□□□□□ -0.98
SMARCA4-202ENST00000413806 A0A1B0GVX0 72 aa8.91□□□□□ -0.98
SMARCA4-202ENST00000413806 ZNF861PO60384 105 aa8.91□□□□□ -0.98
SMARCA4-202ENST00000413806 Q75L30 129 aa8.91□□□□□ -0.98
SMARCA4-202ENST00000413806 KRTAP1-3Q8IUG1 177 aa8.91□□□□□ -0.98
SMARCA4-202ENST00000413806 C9orf163Q8N9P6 203 aa8.9□□□□□ -0.98
SMARCA4-202ENST00000413806 FAM229BQ4G0N7 80 aa8.9□□□□□ -0.99
SMARCA4-202ENST00000413806 DSCR10P59022 87 aa8.89□□□□□ -0.99
SMARCA4-202ENST00000413806 OCR1Q9BZK8 76 aa8.89□□□□□ -0.99
SMARCA4-202ENST00000413806 FP248Q71RG6 208 aaPredicted RBP8.88□□□□□ -0.99
SMARCA4-202ENST00000413806 MTORP42345 2549 aa8.88□□□□□ -0.99
SMARCA4-202ENST00000413806 IGLV5-37A0A075B6J1 123 aa8.88□□□□□ -0.99
SMARCA4-202ENST00000413806 CNBPP62633 177 aaKnown RBP8.88□□□□□ -0.99
SMARCA4-202ENST00000413806 A0A087WTM6 91 aa8.86□□□□□ -0.99
SMARCA4-202ENST00000413806 A0A0G2JQZ4 141 aa8.86□□□□□ -0.99
SMARCA4-202ENST00000413806 A0A1W2PNN7 141 aa8.86□□□□□ -0.99
SMARCA4-202ENST00000413806 POLQO75417 2590 aa8.85□□□□□ -0.99
SMARCA4-202ENST00000413806 FAM104AQ969W3 186 aa8.84□□□□□ -0.99
SMARCA4-202ENST00000413806 CYSTM1Q9H1C7 97 aa8.84□□□□□ -0.99
SMARCA4-202ENST00000413806 KRTAP1-1Q07627 177 aa8.84□□□□□ -0.99
SMARCA4-202ENST00000413806 PRAC1Q96KF2 57 aa8.84□□□□□ -0.99
SMARCA4-202ENST00000413806 A0A1W2PNM2 257 aa8.84□□□□□ -0.99
SMARCA4-202ENST00000413806 IGLV5-48A0A075B6I7 105 aa8.83□□□□□ -1
SMARCA4-202ENST00000413806 SPRR4Q96PI1 79 aa8.81□□□□□ -1
SMARCA4-202ENST00000413806 LINC00304Q8N9R0 145 aa8.81□□□□□ -1
SMARCA4-202ENST00000413806 LUZP6Q538Z0 58 aa8.79□□□□□ -1
SMARCA4-202ENST00000413806 IGLV7-43P04211 117 aa8.79□□□□□ -1
SMARCA4-202ENST00000413806 CASC10Q5T4H9 136 aa8.79□□□□□ -1
SMARCA4-202ENST00000413806 PRR26Q8N8Z3 221 aa8.78□□□□□ -1
SMARCA4-202ENST00000413806 ACANP16112 2415 aa8.77□□□□□ -1.01
SMARCA4-202ENST00000413806 A0A0D9SG42 100 aa8.76□□□□□ -1.01
SMARCA4-202ENST00000413806 Q8N9P0 234 aaPredicted RBP8.76□□□□□ -1.01
SMARCA4-202ENST00000413806 PSORS1C2Q9UIG4 136 aa8.76□□□□□ -1.01
SMARCA4-202ENST00000413806 IGLV7-46A0A075B6I9 117 aa8.76□□□□□ -1.01
SMARCA4-202ENST00000413806 LINC01558Q9Y6Z2 57 aa8.75□□□□□ -1.01
SMARCA4-202ENST00000413806 Q5VV11 94 aa8.75□□□□□ -1.01
SMARCA4-202ENST00000413806 EPG5Q9HCE0 2579 aa8.74□□□□□ -1.01
SMARCA4-202ENST00000413806 OXTP01178 125 aa8.73□□□□□ -1.01
SMARCA4-202ENST00000413806 CSAG1Q6PB30 78 aa8.7□□□□□ -1.02
SMARCA4-202ENST00000413806 FLNBO75369 2602 aaKnown RBP8.7□□□□□ -1.02
SMARCA4-202ENST00000413806 ANAPC11Q9NYG5 84 aa8.7□□□□□ -1.02
SMARCA4-202ENST00000413806 GOLGB1Q14789 3259 aaKnown RBP8.7□□□□□ -1.02
SMARCA4-202ENST00000413806 Q8N1X5 172 aa8.69□□□□□ -1.02
SMARCA4-202ENST00000413806 C9orf92A6NGG3 77 aa8.65□□□□□ -1.03
SMARCA4-202ENST00000413806 SPINK7P58062 85 aa8.62□□□□□ -1.03
SMARCA4-202ENST00000413806 A0A1B0GU33 70 aa8.62□□□□□ -1.03
SMARCA4-202ENST00000413806 A0A0A0MQY5 61 aa8.61□□□□□ -1.03
SMARCA4-202ENST00000413806 F8P00451 2351 aa8.61□□□□□ -1.03
SMARCA4-202ENST00000413806 DMAC1Q96GE9 116 aa8.6□□□□□ -1.03
SMARCA4-202ENST00000413806 DNAH12Q6ZR08 3092 aa8.59□□□□□ -1.03
SMARCA4-202ENST00000413806 J3QL48 77 aa8.59□□□□□ -1.03
SMARCA4-202ENST00000413806 HRES1P13985 223 aa8.58□□□□□ -1.04
SMARCA4-202ENST00000413806 SPRR1AP35321 89 aa8.56□□□□□ -1.04
SMARCA4-202ENST00000413806 SMR3BP02814 79 aaPredicted RBP8.56□□□□□ -1.04
SMARCA4-202ENST00000413806 Q8NDZ9 215 aa8.53□□□□□ -1.04
SMARCA4-202ENST00000413806 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.52□□□□□ -1.05
SMARCA4-202ENST00000413806 COX6B2Q6YFQ2 88 aa8.51□□□□□ -1.05
SMARCA4-202ENST00000413806 TNP2Q05952 138 aa8.49□□□□□ -1.05
SMARCA4-202ENST00000413806 MMP24-AS1A0A0U1RRL7 71 aa8.49□□□□□ -1.05
SMARCA4-202ENST00000413806 PLAC8Q9NZF1 115 aa8.48□□□□□ -1.05
SMARCA4-202ENST00000413806 SPRR1BP22528 89 aa8.48□□□□□ -1.05
SMARCA4-202ENST00000413806 LINC00483Q53H64 154 aa8.47□□□□□ -1.05
SMARCA4-202ENST00000413806 PRRC2CQ9Y520 2896 aaKnown RBP8.46□□□□□ -1.05
SMARCA4-202ENST00000413806 CR1P17927 2039 aa8.44□□□□□ -1.06
SMARCA4-202ENST00000413806 ASB16-AS1Q495Z4 193 aa8.43□□□□□ -1.06
SMARCA4-202ENST00000413806 BPTFQ12830 3046 aa8.41□□□□□ -1.06
SMARCA4-202ENST00000413806 KRTAP26-1Q6PEX3 210 aa8.4□□□□□ -1.06
SMARCA4-202ENST00000413806 HECTD1Q9ULT8 2610 aa8.4□□□□□ -1.06
SMARCA4-202ENST00000413806 LINC00472Q9H8W2 130 aa8.4□□□□□ -1.06
SMARCA4-202ENST00000413806 CHD7Q9P2D1 2997 aa8.38□□□□□ -1.07
SMARCA4-202ENST00000413806 FLNAP21333 2647 aaKnown RBP8.38□□□□□ -1.07
SMARCA4-202ENST00000413806 KRTAP16-1A8MUX0 517 aa8.37□□□□□ -1.07
SMARCA4-202ENST00000413806 ROMO1P60602 79 aa8.36□□□□□ -1.07
SMARCA4-202ENST00000413806 ZCCHC13Q8WW36 166 aaKnown RBP8.36□□□□□ -1.07
SMARCA4-202ENST00000413806 Q5W150 140 aa8.33□□□□□ -1.08
SMARCA4-202ENST00000413806 A6NN06 94 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms