RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 SPRR1AP35321 89 aa11.58□□□□□ -0.56
CDC42-204ENST00000411827 HAMPP81172 84 aa11.58□□□□□ -0.56
CDC42-204ENST00000411827 LINC00528Q8N1L1 170 aa11.58□□□□□ -0.56
CDC42-204ENST00000411827 ZNF73O43830 326 aaPredicted RBP11.57□□□□□ -0.56
CDC42-204ENST00000411827 BCE1O60756 84 aa11.57□□□□□ -0.56
CDC42-204ENST00000411827 PSORS1C2Q9UIG4 136 aa11.57□□□□□ -0.56
CDC42-204ENST00000411827 VAMP3Q15836 100 aa11.56□□□□□ -0.56
CDC42-204ENST00000411827 DIRC1Q969H9 104 aa11.56□□□□□ -0.56
CDC42-204ENST00000411827 DNAH8Q96JB1 4490 aa11.56□□□□□ -0.56
CDC42-204ENST00000411827 PCP4L1A6NKN8 68 aa11.55□□□□□ -0.56
CDC42-204ENST00000411827 H0Y9J4 135 aa11.55□□□□□ -0.56
CDC42-204ENST00000411827 PLA2G1BP04054 148 aaKnown RBP11.55□□□□□ -0.56
CDC42-204ENST00000411827 RPL28P46779 137 aaKnown RBP11.55□□□□□ -0.56
CDC42-204ENST00000411827 ETDCA0A1B0GVM5 59 aa11.54□□□□□ -0.56
CDC42-204ENST00000411827 RPL37AP61513 92 aaKnown RBP11.54□□□□□ -0.56
CDC42-204ENST00000411827 SMIM11BQ8TCY0 68 aa11.54□□□□□ -0.56
CDC42-204ENST00000411827 C1orf137Q5JT78 98 aa11.53□□□□□ -0.56
CDC42-204ENST00000411827 BATFQ16520 125 aa11.52□□□□□ -0.57
CDC42-204ENST00000411827 Q1RN00 199 aa11.52□□□□□ -0.57
CDC42-204ENST00000411827 KRTAP11-1Q8IUC1 163 aa11.52□□□□□ -0.57
CDC42-204ENST00000411827 KRTAP4-16G5E9R7 235 aaPredicted RBP11.51□□□□□ -0.57
CDC42-204ENST00000411827 SMR3BP02814 79 aaPredicted RBP11.51□□□□□ -0.57
CDC42-204ENST00000411827 C6orf99Q4VX62 202 aa11.51□□□□□ -0.57
CDC42-204ENST00000411827 COX6CP09669 75 aa11.5□□□□□ -0.57
CDC42-204ENST00000411827 H0YGX0 51 aa11.49□□□□□ -0.57
CDC42-204ENST00000411827 H7C2G1 150 aa11.49□□□□□ -0.57
CDC42-204ENST00000411827 K7ERJ3 54 aa11.49□□□□□ -0.57
CDC42-204ENST00000411827 IGLV7-43P04211 117 aa11.49□□□□□ -0.57
CDC42-204ENST00000411827 UBE2AP49459 152 aa11.49□□□□□ -0.57
CDC42-204ENST00000411827 FAM19A1Q7Z5A9 133 aa11.49□□□□□ -0.57
CDC42-204ENST00000411827 Q8N1X5 172 aa11.49□□□□□ -0.57
CDC42-204ENST00000411827 SNCGO76070 127 aa11.48□□□□□ -0.57
CDC42-204ENST00000411827 INAFM2P0DMQ5 153 aa11.48□□□□□ -0.57
CDC42-204ENST00000411827 Q6ZRX8 168 aa11.48□□□□□ -0.57
CDC42-204ENST00000411827 SNHG12Q9BXW3 62 aa11.48□□□□□ -0.57
CDC42-204ENST00000411827 B5MCH6 92 aa11.47□□□□□ -0.57
CDC42-204ENST00000411827 ZNF861PO60384 105 aa11.47□□□□□ -0.57
CDC42-204ENST00000411827 COX7BP24311 80 aa11.47□□□□□ -0.57
CDC42-204ENST00000411827 ELOF1P60002 83 aaKnown RBP11.47□□□□□ -0.57
CDC42-204ENST00000411827 COL5A1-AS1Q5SY13 56 aa11.47□□□□□ -0.57
CDC42-204ENST00000411827 KRTAP4-5Q9BYR2 181 aa11.47□□□□□ -0.57
CDC42-204ENST00000411827 DHRS4-AS1Q9P1J3 65 aa11.47□□□□□ -0.57
CDC42-204ENST00000411827 TSPAN13O95857 204 aa11.45□□□□□ -0.58
CDC42-204ENST00000411827 PSMB2P49721 201 aa11.45□□□□□ -0.58
CDC42-204ENST00000411827 FAT1Q14517 4588 aa11.45□□□□□ -0.58
CDC42-204ENST00000411827 SLC25A20O43772 301 aa11.44□□□□□ -0.58
CDC42-204ENST00000411827 KRTAP13-1Q8IUC0 172 aa11.44□□□□□ -0.58
CDC42-204ENST00000411827 LYRM7Q5U5X0 104 aa11.43□□□□□ -0.58
CDC42-204ENST00000411827 Q5VSD8 79 aa11.43□□□□□ -0.58
CDC42-204ENST00000411827 SPINK6Q6UWN8 80 aa11.42□□□□□ -0.58
CDC42-204ENST00000411827 A0A1B0GX51 115 aa11.4□□□□□ -0.58
CDC42-204ENST00000411827 TRIAP1O43715 76 aa11.4□□□□□ -0.58
CDC42-204ENST00000411827 PRLHP81277 87 aa11.4□□□□□ -0.58
CDC42-204ENST00000411827 KRTAP10-4P60372 401 aaPredicted RBP11.39□□□□□ -0.59
CDC42-204ENST00000411827 C9orf118A6NHY6 69 aa11.38□□□□□ -0.59
CDC42-204ENST00000411827 SCGB1C2P0DMR2 95 aa11.38□□□□□ -0.59
CDC42-204ENST00000411827 LINC00575Q6W349 94 aa11.38□□□□□ -0.59
CDC42-204ENST00000411827 HIGD2AQ9BW72 106 aa11.38□□□□□ -0.59
CDC42-204ENST00000411827 ZNF706Q9Y5V0 76 aaPredicted RBP11.37□□□□□ -0.59
CDC42-204ENST00000411827 TAX1BP3O14907 124 aa11.36□□□□□ -0.59
CDC42-204ENST00000411827 GHRHP01286 108 aa11.36□□□□□ -0.59
CDC42-204ENST00000411827 hADV29S1A0JD25 119 aa11.35□□□□□ -0.59
CDC42-204ENST00000411827 SMCR5Q8TEV8 140 aa11.35□□□□□ -0.59
CDC42-204ENST00000411827 Q9BRP9 147 aa11.35□□□□□ -0.59
CDC42-204ENST00000411827 TRBV20-1A0A075B6N2 111 aa11.33□□□□□ -0.6
CDC42-204ENST00000411827 H3BUT2 72 aa11.33□□□□□ -0.6
CDC42-204ENST00000411827 H3BQ85 93 aa11.31□□□□□ -0.6
CDC42-204ENST00000411827 OCIAD2Q56VL3 154 aa11.31□□□□□ -0.6
CDC42-204ENST00000411827 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.31□□□□□ -0.6
CDC42-204ENST00000411827 HERC1Q15751 4861 aa11.31□□□□□ -0.6
CDC42-204ENST00000411827 A0A1W2PPM0 123 aa11.3□□□□□ -0.6
CDC42-204ENST00000411827 FABP2P12104 132 aa11.3□□□□□ -0.6
CDC42-204ENST00000411827 TRACP01848 142 aa11.29□□□□□ -0.6
CDC42-204ENST00000411827 DNAL4O96015 105 aa11.28□□□□□ -0.6
CDC42-204ENST00000411827 ATXN8Q156A1 80 aa11.28□□□□□ -0.6
CDC42-204ENST00000411827 PPDPFLQ8WWR9 84 aa11.28□□□□□ -0.6
CDC42-204ENST00000411827 LST1O00453 97 aa11.27□□□□□ -0.61
CDC42-204ENST00000411827 ERC2-IT1O76042 136 aa11.26□□□□□ -0.61
CDC42-204ENST00000411827 CLEC2BQ92478 149 aa11.26□□□□□ -0.61
CDC42-204ENST00000411827 SPRR4Q96PI1 79 aa11.26□□□□□ -0.61
CDC42-204ENST00000411827 NAA38Q9BRA0 125 aaKnown RBP11.26□□□□□ -0.61
CDC42-204ENST00000411827 FAM218AQ96MZ4 157 aa11.25□□□□□ -0.61
CDC42-204ENST00000411827 VPS13BQ7Z7G8 4022 aa11.25□□□□□ -0.61
CDC42-204ENST00000411827 IGLV5-48A0A075B6I7 105 aa11.24□□□□□ -0.61
CDC42-204ENST00000411827 TEX49A0A1B0GTD5 131 aa11.24□□□□□ -0.61
CDC42-204ENST00000411827 FAM229BQ4G0N7 80 aa11.24□□□□□ -0.61
CDC42-204ENST00000411827 Q6ZQY7 126 aa11.24□□□□□ -0.61
CDC42-204ENST00000411827 SRRM2Q9UQ35 2752 aaKnown RBP11.24□□□□□ -0.61
CDC42-204ENST00000411827 SPRR1BP22528 89 aa11.23□□□□□ -0.61
CDC42-204ENST00000411827 LINC00483Q53H64 154 aa11.23□□□□□ -0.61
CDC42-204ENST00000411827 TCL1BO95988 128 aa11.21□□□□□ -0.61
CDC42-204ENST00000411827 ORMDL1Q9P0S3 153 aa11.2□□□□□ -0.62
CDC42-204ENST00000411827 GAGE2AQ6NT46 116 aa11.19□□□□□ -0.62
CDC42-204ENST00000411827 J3QL48 77 aa11.18□□□□□ -0.62
CDC42-204ENST00000411827 ST20-AS1Q8NBB2 130 aa11.18□□□□□ -0.62
CDC42-204ENST00000411827 SPCS1Q9Y6A9 102 aa11.18□□□□□ -0.62
CDC42-204ENST00000411827 TMEM256-PLSCR3K7ERE1 68 aa11.17□□□□□ -0.62
CDC42-204ENST00000411827 CRYGAP11844 174 aa11.17□□□□□ -0.62
CDC42-204ENST00000411827 C4orf48Q5BLP8 95 aa11.17□□□□□ -0.62
CDC42-204ENST00000411827 GTF2H5Q6ZYL4 71 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms