RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 SMCR5Q8TEV8 140 aa7.09□□□□□ -1.27
NEDD1-202ENST00000411739 B5MCH6 92 aa7.09□□□□□ -1.27
NEDD1-202ENST00000411739 S100A12P80511 92 aa7.09□□□□□ -1.27
NEDD1-202ENST00000411739 ERC2-IT1O76042 136 aa7.08□□□□□ -1.28
NEDD1-202ENST00000411739 PPDPFQ9H3Y8 114 aa7.08□□□□□ -1.28
NEDD1-202ENST00000411739 KRTAP13-2Q52LG2 175 aa7.07□□□□□ -1.28
NEDD1-202ENST00000411739 PAM16Q9Y3D7 125 aa7.07□□□□□ -1.28
NEDD1-202ENST00000411739 ZNF73O43830 326 aaPredicted RBP7.07□□□□□ -1.28
NEDD1-202ENST00000411739 CRYGAP11844 174 aa7.07□□□□□ -1.28
NEDD1-202ENST00000411739 C14orf144Q96I85 54 aa7.07□□□□□ -1.28
NEDD1-202ENST00000411739 Q9BRP9 147 aa7.07□□□□□ -1.28
NEDD1-202ENST00000411739 IFITM1P13164 125 aa7.05□□□□□ -1.28
NEDD1-202ENST00000411739 RPL13AP40429 203 aaKnown RBP7.05□□□□□ -1.28
NEDD1-202ENST00000411739 JOSD1Q15040 202 aaPredicted RBP7.05□□□□□ -1.28
NEDD1-202ENST00000411739 TYMSOSQ8TAI1 123 aa7.05□□□□□ -1.28
NEDD1-202ENST00000411739 SPRR4Q96PI1 79 aa7.05□□□□□ -1.28
NEDD1-202ENST00000411739 A6NDN8 102 aa7.05□□□□□ -1.28
NEDD1-202ENST00000411739 SPATA45Q537H7 98 aa7.05□□□□□ -1.28
NEDD1-202ENST00000411739 Q6ZRX8 168 aa7.05□□□□□ -1.28
NEDD1-202ENST00000411739 TSPAN13O95857 204 aa7.04□□□□□ -1.28
NEDD1-202ENST00000411739 COX8AP10176 69 aa7.04□□□□□ -1.28
NEDD1-202ENST00000411739 LINC00518Q8N0U6 118 aa7.04□□□□□ -1.28
NEDD1-202ENST00000411739 C3orf22Q8N5N4 141 aa7.04□□□□□ -1.28
NEDD1-202ENST00000411739 Q6ZVH6 145 aa7.04□□□□□ -1.28
NEDD1-202ENST00000411739 GAGE2AQ6NT46 116 aa7.03□□□□□ -1.28
NEDD1-202ENST00000411739 VAMP8Q9BV40 100 aa7.03□□□□□ -1.28
NEDD1-202ENST00000411739 C6orf99Q4VX62 202 aa7.02□□□□□ -1.29
NEDD1-202ENST00000411739 PYY3Q5JQD4 70 aa7.02□□□□□ -1.29
NEDD1-202ENST00000411739 COPS9Q8WXC6 57 aa7.02□□□□□ -1.29
NEDD1-202ENST00000411739 FAM229BQ4G0N7 80 aa7.02□□□□□ -1.29
NEDD1-202ENST00000411739 ST20-AS1Q8NBB2 130 aa7.02□□□□□ -1.29
NEDD1-202ENST00000411739 A4D1N5 150 aa7.01□□□□□ -1.29
NEDD1-202ENST00000411739 C12orf57Q99622 126 aa7.01□□□□□ -1.29
NEDD1-202ENST00000411739 HIST1H4GQ99525 98 aa7.01□□□□□ -1.29
NEDD1-202ENST00000411739 HINT1P49773 126 aaPredicted RBP7□□□□□ -1.29
NEDD1-202ENST00000411739 ZNF706Q9Y5V0 76 aaPredicted RBP7□□□□□ -1.29
NEDD1-202ENST00000411739 COX7BP24311 80 aa6.99□□□□□ -1.29
NEDD1-202ENST00000411739 DLEU1O43261 78 aa6.98□□□□□ -1.29
NEDD1-202ENST00000411739 CBY1Q9Y3M2 126 aa6.98□□□□□ -1.29
NEDD1-202ENST00000411739 SLC25A34Q6PIV7 304 aa6.98□□□□□ -1.29
NEDD1-202ENST00000411739 SMIM11BQ8TCY0 68 aa6.98□□□□□ -1.29
NEDD1-202ENST00000411739 IGLV9-49A0A0B4J1Y8 123 aa6.97□□□□□ -1.29
NEDD1-202ENST00000411739 TRAV13-2A0A0B4J235 113 aa6.97□□□□□ -1.29
NEDD1-202ENST00000411739 C2orf91Q6ZV80 131 aa6.97□□□□□ -1.29
NEDD1-202ENST00000411739 LRP2P98164 4655 aa6.97□□□□□ -1.29
NEDD1-202ENST00000411739 ELOF1P60002 83 aaKnown RBP6.96□□□□□ -1.29
NEDD1-202ENST00000411739 LINC00304Q8N9R0 145 aa6.96□□□□□ -1.29
NEDD1-202ENST00000411739 LINC00483Q53H64 154 aa6.96□□□□□ -1.3
NEDD1-202ENST00000411739 UBR4Q5T4S7 5183 aa6.96□□□□□ -1.3
NEDD1-202ENST00000411739 LPAP08519 4548 aa6.95□□□□□ -1.3
NEDD1-202ENST00000411739 DEFB105AQ8NG35 78 aa6.94□□□□□ -1.3
NEDD1-202ENST00000411739 MOBPQ13875 183 aa6.94□□□□□ -1.3
NEDD1-202ENST00000411739 Q8NBF4 154 aa6.94□□□□□ -1.3
NEDD1-202ENST00000411739 RETNLBQ9BQ08 111 aa6.94□□□□□ -1.3
NEDD1-202ENST00000411739 DHRS4-AS1Q9P1J3 65 aa6.94□□□□□ -1.3
NEDD1-202ENST00000411739 H7C2G1 150 aa6.93□□□□□ -1.3
NEDD1-202ENST00000411739 PRR4Q16378 134 aa6.93□□□□□ -1.3
NEDD1-202ENST00000411739 HIGD1BQ9P298 99 aa6.93□□□□□ -1.3
NEDD1-202ENST00000411739 A0A1B0GWB2 263 aa6.91□□□□□ -1.3
NEDD1-202ENST00000411739 CFC1BP0CG36 223 aa6.91□□□□□ -1.3
NEDD1-202ENST00000411739 CFC1P0CG37 223 aa6.91□□□□□ -1.3
NEDD1-202ENST00000411739 C9orf153Q5TBE3 101 aa6.91□□□□□ -1.3
NEDD1-202ENST00000411739 TRBV7-6A0A0J9YX20 115 aa6.9□□□□□ -1.3
NEDD1-202ENST00000411739 TAL2Q16559 108 aa6.9□□□□□ -1.3
NEDD1-202ENST00000411739 Q1RN00 199 aa6.89□□□□□ -1.31
NEDD1-202ENST00000411739 CEND1Q8N111 149 aa6.89□□□□□ -1.31
NEDD1-202ENST00000411739 FXYD2P54710 66 aa6.89□□□□□ -1.31
NEDD1-202ENST00000411739 RAB37Q96AX2 223 aa6.89□□□□□ -1.31
NEDD1-202ENST00000411739 C4orf48Q5BLP8 95 aa6.88□□□□□ -1.31
NEDD1-202ENST00000411739 SPRR1BP22528 89 aa6.87□□□□□ -1.31
NEDD1-202ENST00000411739 LINC01547P58512 204 aaPredicted RBP6.87□□□□□ -1.31
NEDD1-202ENST00000411739 VAMP3Q15836 100 aa6.87□□□□□ -1.31
NEDD1-202ENST00000411739 LINC00575Q6W349 94 aa6.86□□□□□ -1.31
NEDD1-202ENST00000411739 SSBP3-AS1Q7Z2R9 100 aa6.86□□□□□ -1.31
NEDD1-202ENST00000411739 PRO1933Q9H354 126 aa6.86□□□□□ -1.31
NEDD1-202ENST00000411739 TEX49A0A1B0GTD5 131 aa6.85□□□□□ -1.31
NEDD1-202ENST00000411739 HRCT1Q6UXD1 115 aa6.85□□□□□ -1.31
NEDD1-202ENST00000411739 LAMTOR3Q9UHA4 124 aa6.85□□□□□ -1.31
NEDD1-202ENST00000411739 A0A0G2JQZ4 141 aa6.85□□□□□ -1.31
NEDD1-202ENST00000411739 SPAG11AQ6PDA7 123 aa6.85□□□□□ -1.31
NEDD1-202ENST00000411739 UQCR10Q9UDW1 63 aa6.85□□□□□ -1.31
NEDD1-202ENST00000411739 A0A0B4J2C4 111 aa6.84□□□□□ -1.31
NEDD1-202ENST00000411739 SLC25A20O43772 301 aa6.84□□□□□ -1.31
NEDD1-202ENST00000411739 SMIM29Q86T20 159 aa6.84□□□□□ -1.31
NEDD1-202ENST00000411739 hADV29S1A0JD25 119 aa6.84□□□□□ -1.32
NEDD1-202ENST00000411739 Q8N377 158 aa6.84□□□□□ -1.32
NEDD1-202ENST00000411739 K7ERJ3 54 aa6.83□□□□□ -1.32
NEDD1-202ENST00000411739 NHP2Q9NX24 153 aaKnown RBP6.83□□□□□ -1.32
NEDD1-202ENST00000411739 IGLV5-48A0A075B6I7 105 aa6.83□□□□□ -1.32
NEDD1-202ENST00000411739 HSD52Q0P140 79 aa6.83□□□□□ -1.32
NEDD1-202ENST00000411739 Q6ZQY7 126 aa6.83□□□□□ -1.32
NEDD1-202ENST00000411739 PRO1854Q9UHT4 67 aa6.82□□□□□ -1.32
NEDD1-202ENST00000411739 SPINK1P00995 79 aa6.82□□□□□ -1.32
NEDD1-202ENST00000411739 BVES-AS1Q5T3Y7 98 aa6.82□□□□□ -1.32
NEDD1-202ENST00000411739 TMEM238LA0A1B0GVL6 79 aa6.81□□□□□ -1.32
NEDD1-202ENST00000411739 A6NJY4 79 aa6.81□□□□□ -1.32
NEDD1-202ENST00000411739 FAM218AQ96MZ4 157 aa6.81□□□□□ -1.32
NEDD1-202ENST00000411739 IGLV7-46A0A075B6I9 117 aa6.79□□□□□ -1.32
NEDD1-202ENST00000411739 TRIAP1O43715 76 aa6.77□□□□□ -1.32
NEDD1-202ENST00000411739 RNF213Q63HN8 5207 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms