RNA–Protein interactions for RNA: ENST00000409776.6

RGPD1-202, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 6,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-202ENST00000409776 ZNF861PO60384 105 aa2.59□□□□□ -1.99
RGPD1-202ENST00000409776 LRRC37AA6NMS7 1700 aa2.59□□□□□ -1.99
RGPD1-202ENST00000409776 NRXN2Q9P2S2 1712 aa2.59□□□□□ -1.99
RGPD1-202ENST00000409776 CNBPP62633 177 aaKnown RBP2.59□□□□□ -1.99
RGPD1-202ENST00000409776 FAM168BA1KXE4 195 aa2.59□□□□□ -2
RGPD1-202ENST00000409776 ARFGEF1Q9Y6D6 1849 aa2.59□□□□□ -2
RGPD1-202ENST00000409776 ARHGAP21Q5T5U3 1957 aa2.59□□□□□ -2
RGPD1-202ENST00000409776 MAP1BP46821 2468 aaKnown RBP2.59□□□□□ -2
RGPD1-202ENST00000409776 LINC01546A6NGU7 62 aa2.58□□□□□ -2
RGPD1-202ENST00000409776 BTAF1O14981 1849 aa2.58□□□□□ -2
RGPD1-202ENST00000409776 CEP192Q8TEP8 1941 aa2.58□□□□□ -2
RGPD1-202ENST00000409776 COL5A3P25940 1745 aaPredicted RBP2.58□□□□□ -2
RGPD1-202ENST00000409776 NUP210LQ5VU65 1888 aa2.58□□□□□ -2
RGPD1-202ENST00000409776 RLFQ13129 1914 aa2.58□□□□□ -2
RGPD1-202ENST00000409776 STRCP1A6NGW2 1772 aa2.58□□□□□ -2
RGPD1-202ENST00000409776 A0A0G2JMZ2 1700 aa2.58□□□□□ -2
RGPD1-202ENST00000409776 LRRC37A2A6NM11 1700 aa2.58□□□□□ -2
RGPD1-202ENST00000409776 SBF2Q86WG5 1849 aa2.58□□□□□ -2
RGPD1-202ENST00000409776 MALRD1Q5VYJ5 2156 aa2.58□□□□□ -2
RGPD1-202ENST00000409776 FRAS1Q86XX4 4008 aa2.58□□□□□ -2
RGPD1-202ENST00000409776 OXTP01178 125 aa2.57□□□□□ -2
RGPD1-202ENST00000409776 Q6ZSN1 163 aa2.57□□□□□ -2
RGPD1-202ENST00000409776 NAV3Q8IVL0 2385 aa2.57□□□□□ -2
RGPD1-202ENST00000409776 NUP210Q8TEM1 1887 aaPredicted RBP2.57□□□□□ -2
RGPD1-202ENST00000409776 NBASA2RRP1 2371 aa2.57□□□□□ -2
RGPD1-202ENST00000409776 CNOT1A5YKK6 2376 aaKnown RBP2.56□□□□□ -2
RGPD1-202ENST00000409776 ZDBF2Q9HCK1 2354 aa2.56□□□□□ -2
RGPD1-202ENST00000409776 A0A1W2PPR1 153 aa2.56□□□□□ -2
RGPD1-202ENST00000409776 TECTAO75443 2155 aa2.56□□□□□ -2
RGPD1-202ENST00000409776 SIPA1L1O43166 1804 aa2.56□□□□□ -2
RGPD1-202ENST00000409776 J3QKU1 62 aa2.56□□□□□ -2
RGPD1-202ENST00000409776 NOTCH3Q9UM47 2321 aa2.56□□□□□ -2
RGPD1-202ENST00000409776 CACNA1HO95180 2353 aa2.56□□□□□ -2
RGPD1-202ENST00000409776 A8MUU9 505 aa2.56□□□□□ -2
RGPD1-202ENST00000409776 OBSL1O75147 1896 aa2.55□□□□□ -2
RGPD1-202ENST00000409776 NLRC5Q86WI3 1866 aa2.55□□□□□ -2
RGPD1-202ENST00000409776 PTPRDP23468 1912 aa2.55□□□□□ -2
RGPD1-202ENST00000409776 NUP98P52948 1817 aa2.55□□□□□ -2
RGPD1-202ENST00000409776 TANC1Q9C0D5 1861 aa2.55□□□□□ -2
RGPD1-202ENST00000409776 KIF26AQ9ULI4 1882 aaPredicted RBP2.55□□□□□ -2
RGPD1-202ENST00000409776 THSD7BQ9C0I4 1608 aa2.54□□□□□ -2
RGPD1-202ENST00000409776 WDR90Q96KV7 1748 aa2.54□□□□□ -2
RGPD1-202ENST00000409776 TSC2P49815 1807 aa2.54□□□□□ -2
RGPD1-202ENST00000409776 PHIPQ8WWQ0 1821 aa2.54□□□□□ -2
RGPD1-202ENST00000409776 SPRR4Q96PI1 79 aa2.54□□□□□ -2
RGPD1-202ENST00000409776 COL4A4P53420 1690 aaPredicted RBP2.54□□□□□ -2
RGPD1-202ENST00000409776 GPR179Q6PRD1 2367 aa2.54□□□□□ -2
RGPD1-202ENST00000409776 LCTP09848 1927 aa2.54□□□□□ -2
RGPD1-202ENST00000409776 KRTAP23-1A1A580 65 aa2.53□□□□□ -2
RGPD1-202ENST00000409776 TNS1Q9HBL0 1735 aaKnown RBP2.53□□□□□ -2
RGPD1-202ENST00000409776 RP1L1Q8IWN7 2480 aaPredicted RBP2.53□□□□□ -2
RGPD1-202ENST00000409776 TRRAPQ9Y4A5 3859 aa2.52□□□□□ -2.01
RGPD1-202ENST00000409776 PCNX1Q96RV3 2341 aa2.52□□□□□ -2.01
RGPD1-202ENST00000409776 ADAMTS9Q9P2N4 1935 aa2.52□□□□□ -2.01
RGPD1-202ENST00000409776 Q5W150 140 aa2.51□□□□□ -2.01
RGPD1-202ENST00000409776 LOC285556D6RIA3 1793 aa2.51□□□□□ -2.01
RGPD1-202ENST00000409776 COL4A6Q14031 1691 aa2.51□□□□□ -2.01
RGPD1-202ENST00000409776 CYSTM1Q9H1C7 97 aa2.51□□□□□ -2.01
RGPD1-202ENST00000409776 FOCADQ5VW36 1801 aa2.51□□□□□ -2.01
RGPD1-202ENST00000409776 DNAH12Q6ZR08 3092 aa2.51□□□□□ -2.01
RGPD1-202ENST00000409776 CSPG4Q6UVK1 2322 aa2.51□□□□□ -2.01
RGPD1-202ENST00000409776 PTPRFP10586 1907 aa2.5□□□□□ -2.01
RGPD1-202ENST00000409776 FNDC1Q4ZHG4 1894 aaPredicted RBP2.5□□□□□ -2.01
RGPD1-202ENST00000409776 A0A087X002 238 aa2.5□□□□□ -2.01
RGPD1-202ENST00000409776 KRTAP26-1Q6PEX3 210 aa2.5□□□□□ -2.01
RGPD1-202ENST00000409776 LAMA2P24043 3122 aaKnown RBP2.5□□□□□ -2.01
RGPD1-202ENST00000409776 PANO1I0J062 215 aa2.5□□□□□ -2.01
RGPD1-202ENST00000409776 LTBP1Q14766 1721 aa2.5□□□□□ -2.01
RGPD1-202ENST00000409776 ATG2AQ2TAZ0 1938 aa2.5□□□□□ -2.01
RGPD1-202ENST00000409776 LINC00612Q8N6U2 182 aa2.5□□□□□ -2.01
RGPD1-202ENST00000409776 TNP1P09430 55 aa2.49□□□□□ -2.01
RGPD1-202ENST00000409776 PLXNA3P51805 1871 aa2.49□□□□□ -2.01
RGPD1-202ENST00000409776 EP300Q09472 2414 aaPredicted RBP2.49□□□□□ -2.01
RGPD1-202ENST00000409776 ADAMTSL1Q8N6G6 1762 aa2.49□□□□□ -2.01
RGPD1-202ENST00000409776 KIAA1549LQ6ZVL6 1849 aa2.49□□□□□ -2.01
RGPD1-202ENST00000409776 KIAA1671Q9BY89 1806 aa2.49□□□□□ -2.01
RGPD1-202ENST00000409776 ACACAQ13085 2346 aa2.49□□□□□ -2.01
RGPD1-202ENST00000409776 NOTCH2NLQ7Z3S9 236 aa2.49□□□□□ -2.01
RGPD1-202ENST00000409776 ANAPC11Q9NYG5 84 aa2.49□□□□□ -2.01
RGPD1-202ENST00000409776 CEP290O15078 2479 aa2.48□□□□□ -2.01
RGPD1-202ENST00000409776 KRTAP4-16G5E9R7 235 aaPredicted RBP2.48□□□□□ -2.01
RGPD1-202ENST00000409776 PTPRSQ13332 1948 aa2.47□□□□□ -2.01
RGPD1-202ENST00000409776 A8MU10 97 aa2.47□□□□□ -2.01
RGPD1-202ENST00000409776 HTTP42858 3142 aa2.47□□□□□ -2.01
RGPD1-202ENST00000409776 SPRR1BP22528 89 aa2.47□□□□□ -2.01
RGPD1-202ENST00000409776 SBF1O95248 1867 aa2.47□□□□□ -2.01
RGPD1-202ENST00000409776 ARID2Q68CP9 1835 aa2.47□□□□□ -2.01
RGPD1-202ENST00000409776 KRTAP11-1Q8IUC1 163 aa2.47□□□□□ -2.01
RGPD1-202ENST00000409776 MMP24-AS1A0A0U1RRL7 71 aa2.46□□□□□ -2.02
RGPD1-202ENST00000409776 TNRC18O15417 2968 aaPredicted RBP2.46□□□□□ -2.02
RGPD1-202ENST00000409776 BRWD3Q6RI45 1802 aa2.46□□□□□ -2.02
RGPD1-202ENST00000409776 FAM186AA6NE01 2351 aa2.46□□□□□ -2.02
RGPD1-202ENST00000409776 VPS13AQ96RL7 3174 aa2.46□□□□□ -2.02
RGPD1-202ENST00000409776 PLXNA1Q9UIW2 1896 aa2.46□□□□□ -2.02
RGPD1-202ENST00000409776 NBDYA0A0U1RRE5 68 aa2.45□□□□□ -2.02
RGPD1-202ENST00000409776 COL11A2P13942 1736 aaPredicted RBP2.45□□□□□ -2.02
RGPD1-202ENST00000409776 WDFY4Q6ZS81 3184 aa2.45□□□□□ -2.02
RGPD1-202ENST00000409776 CMYA5Q8N3K9 4069 aa2.45□□□□□ -2.02
RGPD1-202ENST00000409776 F8P00451 2351 aa2.44□□□□□ -2.02
RGPD1-202ENST00000409776 BOD1L1Q8NFC6 3051 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms