RNA–Protein interactions for RNA: ENST00000409189.7

CCL20-202, Transcript of C-C motif chemokine ligand 20, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCL20, Length 839 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-202ENST00000409189 Q1RN00 199 aa4.31□□□□□ -1.72
CCL20-202ENST00000409189 DAND5Q8N907 189 aa4.31□□□□□ -1.72
CCL20-202ENST00000409189 LINC00588Q9Y4M8 146 aa4.31□□□□□ -1.72
CCL20-202ENST00000409189 TRAV13-2A0A0B4J235 113 aa4.3□□□□□ -1.72
CCL20-202ENST00000409189 LOC107984156A0A0G2JMH3 177 aa4.3□□□□□ -1.72
CCL20-202ENST00000409189 TRBV30A0A0K0K1B3 111 aa4.3□□□□□ -1.72
CCL20-202ENST00000409189 RPL13AP40429 203 aaKnown RBP4.3□□□□□ -1.72
CCL20-202ENST00000409189 LINC00158P58513 81 aa4.3□□□□□ -1.72
CCL20-202ENST00000409189 KRTAP26-1Q6PEX3 210 aa4.3□□□□□ -1.72
CCL20-202ENST00000409189 SOSTDC1Q6X4U4 206 aa4.3□□□□□ -1.72
CCL20-202ENST00000409189 Q6ZR54 194 aa4.3□□□□□ -1.72
CCL20-202ENST00000409189 ARL17AQ8IVW1 177 aa4.3□□□□□ -1.72
CCL20-202ENST00000409189 C2orf48Q96LS8 159 aa4.3□□□□□ -1.72
CCL20-202ENST00000409189 NAA38Q9BRA0 125 aaKnown RBP4.3□□□□□ -1.72
CCL20-202ENST00000409189 NDUFC2O95298 119 aa4.29□□□□□ -1.72
CCL20-202ENST00000409189 NPC2P61916 151 aa4.29□□□□□ -1.72
CCL20-202ENST00000409189 Q5VSD8 79 aa4.29□□□□□ -1.72
CCL20-202ENST00000409189 C2orf82Q6UX34 121 aa4.29□□□□□ -1.72
CCL20-202ENST00000409189 SND1-IT1Q9HBX3 110 aa4.29□□□□□ -1.72
CCL20-202ENST00000409189 IGKV2D-24A0A075B6R9 120 aa4.28□□□□□ -1.72
CCL20-202ENST00000409189 A0A0U1RRA0 63 aa4.28□□□□□ -1.72
CCL20-202ENST00000409189 COX6CP09669 75 aa4.28□□□□□ -1.72
CCL20-202ENST00000409189 PFN2P35080 140 aa4.28□□□□□ -1.72
CCL20-202ENST00000409189 PSMB2P49721 201 aa4.28□□□□□ -1.72
CCL20-202ENST00000409189 TTC32Q5I0X7 151 aa4.28□□□□□ -1.72
CCL20-202ENST00000409189 UBE2DNLQ8IWF7 75 aa4.28□□□□□ -1.72
CCL20-202ENST00000409189 C15orf56Q8N910 161 aa4.28□□□□□ -1.72
CCL20-202ENST00000409189 FAT3Q8TDW7 4589 aa4.28□□□□□ -1.72
CCL20-202ENST00000409189 FAT4Q6V0I7 4981 aa4.28□□□□□ -1.72
CCL20-202ENST00000409189 F8W1H4 67 aa4.27□□□□□ -1.73
CCL20-202ENST00000409189 ATXN8Q156A1 80 aa4.27□□□□□ -1.73
CCL20-202ENST00000409189 CAMK2N2Q96S95 79 aa4.27□□□□□ -1.73
CCL20-202ENST00000409189 M0QXV9 152 aa4.26□□□□□ -1.73
CCL20-202ENST00000409189 TCL1BO95988 128 aa4.26□□□□□ -1.73
CCL20-202ENST00000409189 SCGB1C2P0DMR2 95 aa4.26□□□□□ -1.73
CCL20-202ENST00000409189 Q75L30 129 aa4.26□□□□□ -1.73
CCL20-202ENST00000409189 Q9HAA7 133 aa4.26□□□□□ -1.73
CCL20-202ENST00000409189 C6orf48Q9UBA6 75 aa4.26□□□□□ -1.73
CCL20-202ENST00000409189 PKHD1L1Q86WI1 4243 aa4.26□□□□□ -1.73
CCL20-202ENST00000409189 IGKV2-28A0A075B6P5 120 aa4.25□□□□□ -1.73
CCL20-202ENST00000409189 TRBV10-2A0A0K0K1G8 114 aa4.25□□□□□ -1.73
CCL20-202ENST00000409189 H3BMG7 143 aa4.25□□□□□ -1.73
CCL20-202ENST00000409189 H7C2G1 150 aa4.25□□□□□ -1.73
CCL20-202ENST00000409189 LST1O00453 97 aa4.25□□□□□ -1.73
CCL20-202ENST00000409189 IGKV2D-28P01615 120 aa4.25□□□□□ -1.73
CCL20-202ENST00000409189 RPL28P46779 137 aaKnown RBP4.25□□□□□ -1.73
CCL20-202ENST00000409189 XGP55808 180 aa4.25□□□□□ -1.73
CCL20-202ENST00000409189 HIGD2BQ4VC39 106 aa4.25□□□□□ -1.73
CCL20-202ENST00000409189 UNQ6190/PRO20217Q6UXQ8 127 aa4.25□□□□□ -1.73
CCL20-202ENST00000409189 LINC00337Q8N6G1 96 aa4.25□□□□□ -1.73
CCL20-202ENST00000409189 MUC2Q02817 5179 aa4.25□□□□□ -1.73
CCL20-202ENST00000409189 NDUFC2-KCTD14E9PQ53 114 aa4.24□□□□□ -1.73
CCL20-202ENST00000409189 TLX1NBP0CAT3 122 aa4.24□□□□□ -1.73
CCL20-202ENST00000409189 SYCNQ0VAF6 134 aa4.24□□□□□ -1.73
CCL20-202ENST00000409189 C1orf134Q5TEV5 83 aa4.24□□□□□ -1.73
CCL20-202ENST00000409189 C6orf223Q8N319 242 aa4.24□□□□□ -1.73
CCL20-202ENST00000409189 CARD19Q96LW7 228 aa4.24□□□□□ -1.73
CCL20-202ENST00000409189 PRO0461Q9UI25 63 aa4.24□□□□□ -1.73
CCL20-202ENST00000409189 H3BT86 120 aa4.23□□□□□ -1.73
CCL20-202ENST00000409189 TRACP01848 142 aa4.23□□□□□ -1.73
CCL20-202ENST00000409189 C14orf177Q52M58 125 aa4.23□□□□□ -1.73
CCL20-202ENST00000409189 Q6ZRU5 148 aa4.23□□□□□ -1.73
CCL20-202ENST00000409189 LINC01600Q96MT4 127 aa4.23□□□□□ -1.73
CCL20-202ENST00000409189 TMEM126AQ9H061 195 aa4.23□□□□□ -1.73
CCL20-202ENST00000409189 PKIGQ9Y2B9 76 aa4.23□□□□□ -1.73
CCL20-202ENST00000409189 CBY1Q9Y3M2 126 aa4.23□□□□□ -1.73
CCL20-202ENST00000409189 K7ERU9 68 aa4.22□□□□□ -1.73
CCL20-202ENST00000409189 LINC01620Q4KN68 170 aa4.22□□□□□ -1.73
CCL20-202ENST00000409189 C9orf116Q5BN46 136 aaPredicted RBP4.22□□□□□ -1.73
CCL20-202ENST00000409189 LINC00526Q96FQ7 95 aa4.22□□□□□ -1.73
CCL20-202ENST00000409189 NBDYA0A0U1RRE5 68 aa4.21□□□□□ -1.74
CCL20-202ENST00000409189 A0A1B0GX51 115 aa4.21□□□□□ -1.74
CCL20-202ENST00000409189 H0YGX0 51 aa4.21□□□□□ -1.74
CCL20-202ENST00000409189 SLC25A20O43772 301 aa4.21□□□□□ -1.74
CCL20-202ENST00000409189 SMR3BP02814 79 aaPredicted RBP4.21□□□□□ -1.74
CCL20-202ENST00000409189 CNBPP62633 177 aaKnown RBP4.21□□□□□ -1.74
CCL20-202ENST00000409189 TEN1Q86WV5 123 aa4.21□□□□□ -1.74
CCL20-202ENST00000409189 SMIM11BQ8TCY0 68 aa4.21□□□□□ -1.74
CCL20-202ENST00000409189 C9JAW5 83 aa4.2□□□□□ -1.74
CCL20-202ENST00000409189 J3QR89 54 aa4.2□□□□□ -1.74
CCL20-202ENST00000409189 NCR3O14931 201 aa4.2□□□□□ -1.74
CCL20-202ENST00000409189 PSCAO43653 123 aa4.2□□□□□ -1.74
CCL20-202ENST00000409189 IGLV6-57P01721 117 aa4.2□□□□□ -1.74
CCL20-202ENST00000409189 VPREB1P12018 145 aa4.2□□□□□ -1.74
CCL20-202ENST00000409189 FUSP35637 526 aaKnown RBP eCLIP4.2□□□□□ -1.74
CCL20-202ENST00000409189 OCIAD2Q56VL3 154 aa4.2□□□□□ -1.74
CCL20-202ENST00000409189 S100A7L2Q5SY68 101 aa4.2□□□□□ -1.74
CCL20-202ENST00000409189 OR13C6PQ8NH95 151 aa4.2□□□□□ -1.74
CCL20-202ENST00000409189 CLEC2BQ92478 149 aa4.2□□□□□ -1.74
CCL20-202ENST00000409189 DNAL4O96015 105 aa4.19□□□□□ -1.74
CCL20-202ENST00000409189 RPL18AQ02543 176 aaKnown RBP4.19□□□□□ -1.74
CCL20-202ENST00000409189 MTURNQ8N3F0 131 aa4.19□□□□□ -1.74
CCL20-202ENST00000409189 ANKRD29Q8N6D5 301 aa4.19□□□□□ -1.74
CCL20-202ENST00000409189 TRAV23DV6A0A075B6W5 121 aa4.18□□□□□ -1.74
CCL20-202ENST00000409189 LOC107984640A0A0U1RRK4 108 aa4.18□□□□□ -1.74
CCL20-202ENST00000409189 M0R378 163 aa4.18□□□□□ -1.74
CCL20-202ENST00000409189 WFDC2Q14508 124 aa4.18□□□□□ -1.74
CCL20-202ENST00000409189 ETDBQ3ZM63 59 aa4.18□□□□□ -1.74
CCL20-202ENST00000409189 Q6ZRP5 223 aa4.18□□□□□ -1.74
CCL20-202ENST00000409189 Q8NDZ9 215 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms