RNA–Protein interactions for RNA: ENST00000406451.8

HDAC9-204, Transcript of histone deacetylase 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HDAC9, Length 9,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-204ENST00000406451 KMT2BQ9UMN6 2715 aaPredicted RBP3.31□□□□□ -1.88
HDAC9-204ENST00000406451 A0A087WVE0 104 aa3.31□□□□□ -1.88
HDAC9-204ENST00000406451 APLNQ9ULZ1 77 aa3.31□□□□□ -1.88
HDAC9-204ENST00000406451 LAMA3Q16787 3333 aa3.31□□□□□ -1.88
HDAC9-204ENST00000406451 hDV103S1A0JD37 113 aa3.31□□□□□ -1.88
HDAC9-204ENST00000406451 CFAP54Q96N23 3096 aa3.31□□□□□ -1.88
HDAC9-204ENST00000406451 PRUNE2Q8WUY3 3088 aa3.31□□□□□ -1.88
HDAC9-204ENST00000406451 C15orf56Q8N910 161 aa3.31□□□□□ -1.88
HDAC9-204ENST00000406451 A0A0U1RQV1 116 aa3.31□□□□□ -1.88
HDAC9-204ENST00000406451 VPREB1P12018 145 aa3.31□□□□□ -1.88
HDAC9-204ENST00000406451 LINC00846Q9NV44 126 aa3.3□□□□□ -1.88
HDAC9-204ENST00000406451 ST20-AS1Q8NBB2 130 aa3.3□□□□□ -1.88
HDAC9-204ENST00000406451 TP53AIP1Q9HCN2 124 aa3.3□□□□□ -1.88
HDAC9-204ENST00000406451 A6NED7 52 aa3.3□□□□□ -1.88
HDAC9-204ENST00000406451 SMR3BP02814 79 aaPredicted RBP3.3□□□□□ -1.88
HDAC9-204ENST00000406451 LINC00313P59037 77 aa3.3□□□□□ -1.88
HDAC9-204ENST00000406451 SERTAD4-AS1Q5TG53 156 aa3.3□□□□□ -1.88
HDAC9-204ENST00000406451 IGLV6-57P01721 117 aa3.3□□□□□ -1.88
HDAC9-204ENST00000406451 ATP11AUNQ6ZP68 121 aa3.3□□□□□ -1.88
HDAC9-204ENST00000406451 LINC00304Q8N9R0 145 aa3.3□□□□□ -1.88
HDAC9-204ENST00000406451 C1orf64Q8NEQ6 169 aa3.29□□□□□ -1.88
HDAC9-204ENST00000406451 FAM218AQ96MZ4 157 aa3.29□□□□□ -1.88
HDAC9-204ENST00000406451 C7orf65Q6ZTY9 151 aa3.29□□□□□ -1.88
HDAC9-204ENST00000406451 C9orf163Q8N9P6 203 aa3.29□□□□□ -1.88
HDAC9-204ENST00000406451 TRIOO75962 3097 aa3.29□□□□□ -1.88
HDAC9-204ENST00000406451 MKI67P46013 3256 aaKnown RBP3.29□□□□□ -1.88
HDAC9-204ENST00000406451 WDFY4Q6ZS81 3184 aa3.29□□□□□ -1.88
HDAC9-204ENST00000406451 TRBV7-7A0A0K0K1E9 115 aa3.28□□□□□ -1.88
HDAC9-204ENST00000406451 ZNF861PO60384 105 aa3.28□□□□□ -1.88
HDAC9-204ENST00000406451 KCNQ1DNQ9H478 68 aa3.28□□□□□ -1.88
HDAC9-204ENST00000406451 IGLV1-50A0A075B6I6 118 aa3.28□□□□□ -1.88
HDAC9-204ENST00000406451 STAB2Q8WWQ8 2551 aa3.28□□□□□ -1.88
HDAC9-204ENST00000406451 Q96NJ1 140 aa3.28□□□□□ -1.88
HDAC9-204ENST00000406451 CASC10Q5T4H9 136 aa3.28□□□□□ -1.89
HDAC9-204ENST00000406451 ZNF575Q86XF7 245 aa3.28□□□□□ -1.89
HDAC9-204ENST00000406451 LOC110117498A0A087WWA1 95 aa3.27□□□□□ -1.89
HDAC9-204ENST00000406451 CCDC179H3BU77 68 aa3.27□□□□□ -1.89
HDAC9-204ENST00000406451 LAMA2P24043 3122 aaKnown RBP3.27□□□□□ -1.89
HDAC9-204ENST00000406451 NSD1Q96L73 2696 aaPredicted RBP3.27□□□□□ -1.89
HDAC9-204ENST00000406451 TMEM254Q8TBM7 123 aa3.27□□□□□ -1.89
HDAC9-204ENST00000406451 DMBT1Q9UGM3 2413 aaPredicted RBP3.27□□□□□ -1.89
HDAC9-204ENST00000406451 SMIM29Q86T20 159 aa3.27□□□□□ -1.89
HDAC9-204ENST00000406451 APCP25054 2843 aa3.27□□□□□ -1.89
HDAC9-204ENST00000406451 FRYLO94915 3013 aa3.27□□□□□ -1.89
HDAC9-204ENST00000406451 SPAG11AQ6PDA7 123 aa3.27□□□□□ -1.89
HDAC9-204ENST00000406451 Q6ZQT0 140 aa3.27□□□□□ -1.89
HDAC9-204ENST00000406451 WIPF1O43516 503 aa3.27□□□□□ -1.89
HDAC9-204ENST00000406451 TLX1NBP0CAT3 122 aa3.27□□□□□ -1.89
HDAC9-204ENST00000406451 COX6B2Q6YFQ2 88 aa3.27□□□□□ -1.89
HDAC9-204ENST00000406451 TRBV7-4A0A0J9YYF1 115 aa3.26□□□□□ -1.89
HDAC9-204ENST00000406451 CNBPP62633 177 aaKnown RBP3.26□□□□□ -1.89
HDAC9-204ENST00000406451 LINC00528Q8N1L1 170 aa3.26□□□□□ -1.89
HDAC9-204ENST00000406451 CDIP1Q9H305 208 aa3.26□□□□□ -1.89
HDAC9-204ENST00000406451 C9orf129Q5T035 196 aaKnown RBP3.26□□□□□ -1.89
HDAC9-204ENST00000406451 ITPR1Q14643 2758 aa3.26□□□□□ -1.89
HDAC9-204ENST00000406451 BRCA2P51587 3418 aa3.26□□□□□ -1.89
HDAC9-204ENST00000406451 LITAFQ99732 161 aa3.26□□□□□ -1.89
HDAC9-204ENST00000406451 C8orf87E5RJ46 101 aa3.25□□□□□ -1.89
HDAC9-204ENST00000406451 PLA2G2DQ9UNK4 145 aa3.25□□□□□ -1.89
HDAC9-204ENST00000406451 IGLV7-43P04211 117 aa3.25□□□□□ -1.89
HDAC9-204ENST00000406451 RPS28P62857 69 aaKnown RBP3.25□□□□□ -1.89
HDAC9-204ENST00000406451 SSBP3-AS1Q7Z2R9 100 aa3.25□□□□□ -1.89
HDAC9-204ENST00000406451 PSORS1C2Q9UIG4 136 aa3.24□□□□□ -1.89
HDAC9-204ENST00000406451 NBEAL2Q6ZNJ1 2754 aa3.24□□□□□ -1.89
HDAC9-204ENST00000406451 SMIM26A0A096LP01 95 aa3.24□□□□□ -1.89
HDAC9-204ENST00000406451 A8MWP4 228 aa3.24□□□□□ -1.89
HDAC9-204ENST00000406451 TNP2Q05952 138 aa3.24□□□□□ -1.89
HDAC9-204ENST00000406451 ACYP2P14621 99 aa3.23□□□□□ -1.89
HDAC9-204ENST00000406451 VPS13AQ96RL7 3174 aa3.23□□□□□ -1.89
HDAC9-204ENST00000406451 TRAV22A0A0B4J277 110 aa3.23□□□□□ -1.89
HDAC9-204ENST00000406451 A0A1W2PNN7 141 aa3.23□□□□□ -1.89
HDAC9-204ENST00000406451 IGFL1Q6UW32 110 aa3.22□□□□□ -1.89
HDAC9-204ENST00000406451 C9orf92A6NGG3 77 aa3.22□□□□□ -1.89
HDAC9-204ENST00000406451 H3BPC8 53 aa3.22□□□□□ -1.89
HDAC9-204ENST00000406451 OBSCN-AS1Q96MR7 158 aa3.22□□□□□ -1.89
HDAC9-204ENST00000406451 PRO0461Q9UI25 63 aa3.22□□□□□ -1.89
HDAC9-204ENST00000406451 ANAPC11Q9NYG5 84 aa3.21□□□□□ -1.89
HDAC9-204ENST00000406451 C1orf195Q5TG92 126 aa3.21□□□□□ -1.9
HDAC9-204ENST00000406451 SPRR4Q96PI1 79 aa3.21□□□□□ -1.9
HDAC9-204ENST00000406451 SMCPP49901 116 aaPredicted RBP3.21□□□□□ -1.9
HDAC9-204ENST00000406451 DSCR10P59022 87 aa3.21□□□□□ -1.9
HDAC9-204ENST00000406451 LOC101927531A0A1B0GV80 90 aa3.2□□□□□ -1.9
HDAC9-204ENST00000406451 MRPL34Q9BQ48 92 aaKnown RBP3.2□□□□□ -1.9
HDAC9-204ENST00000406451 HIVEP1P15822 2718 aa3.2□□□□□ -1.9
HDAC9-204ENST00000406451 PSPHP1O15172 72 aa3.19□□□□□ -1.9
HDAC9-204ENST00000406451 Q8N377 158 aa3.19□□□□□ -1.9
HDAC9-204ENST00000406451 A0A1B0GU69 56 aa3.19□□□□□ -1.9
HDAC9-204ENST00000406451 A0A1B0GVX0 72 aa3.19□□□□□ -1.9
HDAC9-204ENST00000406451 K7EQZ3 153 aa3.19□□□□□ -1.9
HDAC9-204ENST00000406451 FRYQ5TBA9 3013 aa3.18□□□□□ -1.9
HDAC9-204ENST00000406451 EIF4EBP3O60516 100 aaPredicted RBP3.18□□□□□ -1.9
HDAC9-204ENST00000406451 C8orf17Q9NRJ1 99 aa3.18□□□□□ -1.9
HDAC9-204ENST00000406451 IGLV5-37A0A075B6J1 123 aa3.18□□□□□ -1.9
HDAC9-204ENST00000406451 PRR15Q8IV56 129 aa3.18□□□□□ -1.9
HDAC9-204ENST00000406451 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.17□□□□□ -1.9
HDAC9-204ENST00000406451 ERC2-IT1O76042 136 aa3.17□□□□□ -1.9
HDAC9-204ENST00000406451 XIRP2A4UGR9 3374 aa3.17□□□□□ -1.9
HDAC9-204ENST00000406451 A0A0G2JQZ4 141 aa3.17□□□□□ -1.9
HDAC9-204ENST00000406451 RBM12B-AS1Q9P1G2 102 aa3.17□□□□□ -1.9
HDAC9-204ENST00000406451 LCE6AA0A183 80 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms