RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 PRR4Q16378 134 aa10.84□□□□□ -0.67
COL4A3BP-204ENST00000405807 C10orf25Q5T742 122 aa10.84□□□□□ -0.67
COL4A3BP-204ENST00000405807 Q8N9L7 120 aa10.84□□□□□ -0.67
COL4A3BP-204ENST00000405807 A0A0J9YWU9 116 aa10.83□□□□□ -0.68
COL4A3BP-204ENST00000405807 IGHV4-30-4P0DP06 118 aa10.83□□□□□ -0.68
COL4A3BP-204ENST00000405807 OXLD1Q5BKU9 147 aa10.82□□□□□ -0.68
COL4A3BP-204ENST00000405807 CYSRT1A8MQ03 144 aa10.81□□□□□ -0.68
COL4A3BP-204ENST00000405807 A6NED7 52 aa10.8□□□□□ -0.68
COL4A3BP-204ENST00000405807 PRR15LQ9BU68 103 aa10.8□□□□□ -0.68
COL4A3BP-204ENST00000405807 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.78□□□□□ -0.68
COL4A3BP-204ENST00000405807 FN1P02751 2386 aaKnown RBP10.78□□□□□ -0.68
COL4A3BP-204ENST00000405807 LIMD2Q9BT23 127 aa10.78□□□□□ -0.68
COL4A3BP-204ENST00000405807 CYP4F30PQ9H0H9 118 aa10.78□□□□□ -0.68
COL4A3BP-204ENST00000405807 GVQW2A0A096LPI5 108 aaPredicted RBP10.76□□□□□ -0.69
COL4A3BP-204ENST00000405807 SERTAD4-AS1Q5TG53 156 aa10.76□□□□□ -0.69
COL4A3BP-204ENST00000405807 IGKV4-1P06312 121 aa10.76□□□□□ -0.69
COL4A3BP-204ENST00000405807 LINC01554Q52M75 96 aa10.76□□□□□ -0.69
COL4A3BP-204ENST00000405807 NOTCH2Q04721 2471 aa10.75□□□□□ -0.69
COL4A3BP-204ENST00000405807 Q8N9P0 234 aaPredicted RBP10.75□□□□□ -0.69
COL4A3BP-204ENST00000405807 ZNF462Q96JM2 2506 aa10.75□□□□□ -0.69
COL4A3BP-204ENST00000405807 COX7BP24311 80 aa10.75□□□□□ -0.69
COL4A3BP-204ENST00000405807 FAM30AQ9NZY2 134 aa10.75□□□□□ -0.69
COL4A3BP-204ENST00000405807 ACANP16112 2415 aa10.74□□□□□ -0.69
COL4A3BP-204ENST00000405807 DEFB4AO15263 64 aa10.74□□□□□ -0.69
COL4A3BP-204ENST00000405807 CELA1Q9UNI1 258 aa10.74□□□□□ -0.69
COL4A3BP-204ENST00000405807 MTORP42345 2549 aa10.74□□□□□ -0.69
COL4A3BP-204ENST00000405807 LELP1Q5T871 98 aa10.73□□□□□ -0.69
COL4A3BP-204ENST00000405807 LINC00313P59037 77 aa10.73□□□□□ -0.69
COL4A3BP-204ENST00000405807 ITPR3Q14573 2671 aa10.73□□□□□ -0.69
COL4A3BP-204ENST00000405807 MOBPQ13875 183 aa10.72□□□□□ -0.69
COL4A3BP-204ENST00000405807 CDC42SE1Q9NRR8 79 aa10.72□□□□□ -0.69
COL4A3BP-204ENST00000405807 PRR34Q9NV39 138 aa10.72□□□□□ -0.69
COL4A3BP-204ENST00000405807 KLK12Q9UKR0 248 aa10.72□□□□□ -0.69
COL4A3BP-204ENST00000405807 ELOF1P60002 83 aaKnown RBP10.71□□□□□ -0.69
COL4A3BP-204ENST00000405807 XAGE1AQ9HD64 81 aa10.71□□□□□ -0.69
COL4A3BP-204ENST00000405807 C6orf48Q9UBA6 75 aa10.71□□□□□ -0.69
COL4A3BP-204ENST00000405807 DEFB135Q30KP9 77 aa10.7□□□□□ -0.7
COL4A3BP-204ENST00000405807 Q75L30 129 aa10.7□□□□□ -0.7
COL4A3BP-204ENST00000405807 ZCCHC13Q8WW36 166 aaKnown RBP10.7□□□□□ -0.7
COL4A3BP-204ENST00000405807 PRAC1Q96KF2 57 aa10.7□□□□□ -0.7
COL4A3BP-204ENST00000405807 LCE6AA0A183 80 aa10.69□□□□□ -0.7
COL4A3BP-204ENST00000405807 UBR5O95071 2799 aaPredicted RBP10.67□□□□□ -0.7
COL4A3BP-204ENST00000405807 APCP25054 2843 aa10.67□□□□□ -0.7
COL4A3BP-204ENST00000405807 NBEAL2Q6ZNJ1 2754 aa10.66□□□□□ -0.7
COL4A3BP-204ENST00000405807 GCN1Q92616 2671 aaKnown RBP10.66□□□□□ -0.7
COL4A3BP-204ENST00000405807 KRTAP1-1Q07627 177 aa10.66□□□□□ -0.7
COL4A3BP-204ENST00000405807 SMIM29Q86T20 159 aa10.66□□□□□ -0.7
COL4A3BP-204ENST00000405807 HTN3P15516 51 aa10.65□□□□□ -0.7
COL4A3BP-204ENST00000405807 FLNAP21333 2647 aaKnown RBP10.64□□□□□ -0.71
COL4A3BP-204ENST00000405807 SPART-AS1P0CW21 52 aa10.63□□□□□ -0.71
COL4A3BP-204ENST00000405807 KRTAP10-3P60369 221 aa10.63□□□□□ -0.71
COL4A3BP-204ENST00000405807 CAMK2N2Q96S95 79 aa10.62□□□□□ -0.71
COL4A3BP-204ENST00000405807 Q8NAQ8 132 aa10.62□□□□□ -0.71
COL4A3BP-204ENST00000405807 LINC00528Q8N1L1 170 aa10.62□□□□□ -0.71
COL4A3BP-204ENST00000405807 B9D2Q9BPU9 175 aa10.62□□□□□ -0.71
COL4A3BP-204ENST00000405807 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.61□□□□□ -0.71
COL4A3BP-204ENST00000405807 EGFEM1PQ0D2K5 195 aa10.61□□□□□ -0.71
COL4A3BP-204ENST00000405807 MP68P56378 58 aa10.59□□□□□ -0.71
COL4A3BP-204ENST00000405807 HIGD2BQ4VC39 106 aa10.59□□□□□ -0.71
COL4A3BP-204ENST00000405807 LOC101927531A0A1B0GV80 90 aa10.59□□□□□ -0.71
COL4A3BP-204ENST00000405807 LINC00208Q96KT6 92 aa10.57□□□□□ -0.72
COL4A3BP-204ENST00000405807 NDUFB1O75438 58 aa10.55□□□□□ -0.72
COL4A3BP-204ENST00000405807 ADM2Q7Z4H4 148 aa10.54□□□□□ -0.72
COL4A3BP-204ENST00000405807 ST20-AS1Q8NBB2 130 aa10.54□□□□□ -0.72
COL4A3BP-204ENST00000405807 ANK3Q12955 4377 aaKnown RBP10.53□□□□□ -0.72
COL4A3BP-204ENST00000405807 ETDCA0A1B0GVM5 59 aa10.53□□□□□ -0.72
COL4A3BP-204ENST00000405807 USP24Q9UPU5 2620 aa10.53□□□□□ -0.72
COL4A3BP-204ENST00000405807 KRTAP26-1Q6PEX3 210 aa10.52□□□□□ -0.73
COL4A3BP-204ENST00000405807 ITPR2Q14571 2701 aa10.51□□□□□ -0.73
COL4A3BP-204ENST00000405807 C3orf84H3BNL1 204 aa10.51□□□□□ -0.73
COL4A3BP-204ENST00000405807 WFDC10BQ8IUB3 73 aa10.5□□□□□ -0.73
COL4A3BP-204ENST00000405807 C15orf56Q8N910 161 aa10.5□□□□□ -0.73
COL4A3BP-204ENST00000405807 HIVEP2P31629 2446 aa10.49□□□□□ -0.73
COL4A3BP-204ENST00000405807 DEFB105AQ8NG35 78 aa10.49□□□□□ -0.73
COL4A3BP-204ENST00000405807 KCNQ1DNQ9H478 68 aa10.48□□□□□ -0.73
COL4A3BP-204ENST00000405807 Q9BRP9 147 aa10.48□□□□□ -0.73
COL4A3BP-204ENST00000405807 IGLV5-48A0A075B6I7 105 aa10.48□□□□□ -0.73
COL4A3BP-204ENST00000405807 A0A1B0GW54 56 aa10.48□□□□□ -0.73
COL4A3BP-204ENST00000405807 KPRPQ5T749 579 aaPredicted RBP10.47□□□□□ -0.73
COL4A3BP-204ENST00000405807 Q8N377 158 aa10.47□□□□□ -0.73
COL4A3BP-204ENST00000405807 CASC2Q6XLA1 102 aa10.47□□□□□ -0.73
COL4A3BP-204ENST00000405807 ZNF706Q9Y5V0 76 aaPredicted RBP10.46□□□□□ -0.73
COL4A3BP-204ENST00000405807 H3BNG1 76 aa10.45□□□□□ -0.74
COL4A3BP-204ENST00000405807 DHRS4-AS1Q9P1J3 65 aa10.43□□□□□ -0.74
COL4A3BP-204ENST00000405807 HECTD1Q9ULT8 2610 aa10.43□□□□□ -0.74
COL4A3BP-204ENST00000405807 PLA2G1BP04054 148 aaKnown RBP10.42□□□□□ -0.74
COL4A3BP-204ENST00000405807 SPINK7P58062 85 aa10.42□□□□□ -0.74
COL4A3BP-204ENST00000405807 C7orf33Q8WU49 177 aa10.42□□□□□ -0.74
COL4A3BP-204ENST00000405807 SMR3AQ99954 134 aa10.41□□□□□ -0.74
COL4A3BP-204ENST00000405807 VWFP04275 2813 aa10.41□□□□□ -0.74
COL4A3BP-204ENST00000405807 PDZD2O15018 2839 aa10.4□□□□□ -0.74
COL4A3BP-204ENST00000405807 H0Y9J4 135 aa10.4□□□□□ -0.74
COL4A3BP-204ENST00000405807 RETNLBQ9BQ08 111 aa10.4□□□□□ -0.74
COL4A3BP-204ENST00000405807 IGKV2D-24A0A075B6R9 120 aa10.39□□□□□ -0.75
COL4A3BP-204ENST00000405807 A0A1W2PNM2 257 aa10.39□□□□□ -0.75
COL4A3BP-204ENST00000405807 SPANXA2-OT1Q8N9U9 137 aa10.39□□□□□ -0.75
COL4A3BP-204ENST00000405807 TENM4Q6N022 2769 aa10.38□□□□□ -0.75
COL4A3BP-204ENST00000405807 C1orf137Q5JT78 98 aa10.38□□□□□ -0.75
COL4A3BP-204ENST00000405807 Q6ZRX8 168 aa10.38□□□□□ -0.75
COL4A3BP-204ENST00000405807 LINC00476Q8WZB0 136 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 154.8 ms