RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 LINC01561Q8N1V8 128 aa7.48□□□□□ -1.21
CACNA1C-216ENST00000399638 XIRP2A4UGR9 3374 aa7.47□□□□□ -1.21
CACNA1C-216ENST00000399638 KRTAP10-11P60412 298 aa7.47□□□□□ -1.21
CACNA1C-216ENST00000399638 OBSCN-AS1Q96MR7 158 aa7.46□□□□□ -1.21
CACNA1C-216ENST00000399638 LINC00483Q53H64 154 aa7.46□□□□□ -1.22
CACNA1C-216ENST00000399638 A8MUN3 132 aa7.45□□□□□ -1.22
CACNA1C-216ENST00000399638 ST20-AS1Q8NBB2 130 aa7.45□□□□□ -1.22
CACNA1C-216ENST00000399638 PSORS1C2Q9UIG4 136 aa7.45□□□□□ -1.22
CACNA1C-216ENST00000399638 ERC2-IT1O76042 136 aa7.45□□□□□ -1.22
CACNA1C-216ENST00000399638 TP53AIP1Q9HCN2 124 aa7.45□□□□□ -1.22
CACNA1C-216ENST00000399638 LAMA3Q16787 3333 aa7.45□□□□□ -1.22
CACNA1C-216ENST00000399638 KTN1-AS1Q86SY8 53 aa7.43□□□□□ -1.22
CACNA1C-216ENST00000399638 COA5Q86WW8 74 aa7.43□□□□□ -1.22
CACNA1C-216ENST00000399638 CDC42SE1Q9NRR8 79 aa7.43□□□□□ -1.22
CACNA1C-216ENST00000399638 Q6ZSA8 131 aa7.43□□□□□ -1.22
CACNA1C-216ENST00000399638 PLAC4Q8WY50 150 aa7.43□□□□□ -1.22
CACNA1C-216ENST00000399638 Q8NAQ8 132 aa7.42□□□□□ -1.22
CACNA1C-216ENST00000399638 LINC00476Q8WZB0 136 aa7.42□□□□□ -1.22
CACNA1C-216ENST00000399638 CAMK2N1Q7Z7J9 78 aa7.42□□□□□ -1.22
CACNA1C-216ENST00000399638 HECTD1Q9ULT8 2610 aa7.41□□□□□ -1.22
CACNA1C-216ENST00000399638 FAM168BA1KXE4 195 aa7.4□□□□□ -1.22
CACNA1C-216ENST00000399638 A0A087WTM6 91 aa7.4□□□□□ -1.22
CACNA1C-216ENST00000399638 Q8N1X5 172 aa7.4□□□□□ -1.22
CACNA1C-216ENST00000399638 UQCR11O14957 56 aa7.39□□□□□ -1.23
CACNA1C-216ENST00000399638 LITAFQ99732 161 aa7.38□□□□□ -1.23
CACNA1C-216ENST00000399638 IGHV3OR16-9A0A0B4J2B5 98 aa7.37□□□□□ -1.23
CACNA1C-216ENST00000399638 C11orf72Q8NBR9 251 aa7.37□□□□□ -1.23
CACNA1C-216ENST00000399638 IGLV1-50A0A075B6I6 118 aa7.36□□□□□ -1.23
CACNA1C-216ENST00000399638 Q6ZRX8 168 aa7.36□□□□□ -1.23
CACNA1C-216ENST00000399638 CDH23Q9H251 3354 aa7.35□□□□□ -1.23
CACNA1C-216ENST00000399638 SZT2Q5T011 3432 aa7.35□□□□□ -1.23
CACNA1C-216ENST00000399638 ANKRD17O75179 2603 aaKnown RBP7.34□□□□□ -1.23
CACNA1C-216ENST00000399638 A0A1B0GW54 56 aa7.34□□□□□ -1.24
CACNA1C-216ENST00000399638 GVQW2A0A096LPI5 108 aaPredicted RBP7.33□□□□□ -1.24
CACNA1C-216ENST00000399638 A0A0G2JQZ4 141 aa7.33□□□□□ -1.24
CACNA1C-216ENST00000399638 A0A1W2PNN7 141 aa7.33□□□□□ -1.24
CACNA1C-216ENST00000399638 ANAPC11Q9NYG5 84 aa7.32□□□□□ -1.24
CACNA1C-216ENST00000399638 DNAH14Q0VDD8 3507 aa7.32□□□□□ -1.24
CACNA1C-216ENST00000399638 IGLV7-46A0A075B6I9 117 aa7.32□□□□□ -1.24
CACNA1C-216ENST00000399638 ZNF861PO60384 105 aa7.32□□□□□ -1.24
CACNA1C-216ENST00000399638 CASC10Q5T4H9 136 aa7.3□□□□□ -1.24
CACNA1C-216ENST00000399638 ELOF1P60002 83 aaKnown RBP7.3□□□□□ -1.24
CACNA1C-216ENST00000399638 LOC110117498A0A087WWA1 95 aa7.3□□□□□ -1.24
CACNA1C-216ENST00000399638 H3BS24 57 aa7.29□□□□□ -1.24
CACNA1C-216ENST00000399638 IGLV7-43P04211 117 aa7.28□□□□□ -1.24
CACNA1C-216ENST00000399638 MRPL34Q9BQ48 92 aaKnown RBP7.28□□□□□ -1.24
CACNA1C-216ENST00000399638 COL27A1Q8IZC6 1860 aaPredicted RBP7.28□□□□□ -1.24
CACNA1C-216ENST00000399638 C9orf163Q8N9P6 203 aa7.27□□□□□ -1.25
CACNA1C-216ENST00000399638 TRBV7-4A0A0J9YYF1 115 aa7.25□□□□□ -1.25
CACNA1C-216ENST00000399638 LOC101927531A0A1B0GV80 90 aa7.24□□□□□ -1.25
CACNA1C-216ENST00000399638 C19orf73Q9NVV2 129 aa7.24□□□□□ -1.25
CACNA1C-216ENST00000399638 A0A0A0MQY5 61 aa7.24□□□□□ -1.25
CACNA1C-216ENST00000399638 KRTAP10-3P60369 221 aa7.24□□□□□ -1.25
CACNA1C-216ENST00000399638 FAM218AQ96MZ4 157 aa7.24□□□□□ -1.25
CACNA1C-216ENST00000399638 PRRC2CQ9Y520 2896 aaKnown RBP7.24□□□□□ -1.25
CACNA1C-216ENST00000399638 TNP2Q05952 138 aa7.24□□□□□ -1.25
CACNA1C-216ENST00000399638 KLKP1Q107X0 134 aa7.24□□□□□ -1.25
CACNA1C-216ENST00000399638 Q5VSD8 79 aa7.24□□□□□ -1.25
CACNA1C-216ENST00000399638 UNC80Q8N2C7 3258 aa7.23□□□□□ -1.25
CACNA1C-216ENST00000399638 C15orf56Q8N910 161 aa7.23□□□□□ -1.25
CACNA1C-216ENST00000399638 STAB1Q9NY15 2570 aa7.23□□□□□ -1.25
CACNA1C-216ENST00000399638 CD164Q04900 197 aa7.22□□□□□ -1.25
CACNA1C-216ENST00000399638 LCA10Q71F78 164 aa7.22□□□□□ -1.25
CACNA1C-216ENST00000399638 A8MWP4 228 aa7.22□□□□□ -1.25
CACNA1C-216ENST00000399638 PTPRBP23467 1997 aa7.21□□□□□ -1.26
CACNA1C-216ENST00000399638 LAMA2P24043 3122 aaKnown RBP7.21□□□□□ -1.26
CACNA1C-216ENST00000399638 H1FX-AS1Q4G0G2 97 aa7.2□□□□□ -1.26
CACNA1C-216ENST00000399638 PRUNE2Q8WUY3 3088 aa7.2□□□□□ -1.26
CACNA1C-216ENST00000399638 SPINK7P58062 85 aa7.19□□□□□ -1.26
CACNA1C-216ENST00000399638 PCSK5Q92824 1860 aa7.19□□□□□ -1.26
CACNA1C-216ENST00000399638 EIF4EBP3O60516 100 aaPredicted RBP7.18□□□□□ -1.26
CACNA1C-216ENST00000399638 PRR26Q8N8Z3 221 aa7.17□□□□□ -1.26
CACNA1C-216ENST00000399638 BPTFQ12830 3046 aa7.16□□□□□ -1.26
CACNA1C-216ENST00000399638 H3BPC8 53 aa7.15□□□□□ -1.26
CACNA1C-216ENST00000399638 Q1T7F1 81 aa7.15□□□□□ -1.26
CACNA1C-216ENST00000399638 FAM104AQ969W3 186 aa7.15□□□□□ -1.27
CACNA1C-216ENST00000399638 A0A1B0GVX0 72 aa7.13□□□□□ -1.27
CACNA1C-216ENST00000399638 LINC00612Q8N6U2 182 aa7.13□□□□□ -1.27
CACNA1C-216ENST00000399638 CELSR3Q9NYQ7 3312 aa7.13□□□□□ -1.27
CACNA1C-216ENST00000399638 IGFL1Q6UW32 110 aa7.12□□□□□ -1.27
CACNA1C-216ENST00000399638 USP34Q70CQ2 3546 aa7.11□□□□□ -1.27
CACNA1C-216ENST00000399638 SETXQ7Z333 2677 aaKnown RBP7.11□□□□□ -1.27
CACNA1C-216ENST00000399638 PRAC1Q96KF2 57 aa7.11□□□□□ -1.27
CACNA1C-216ENST00000399638 H7BZZ5 65 aa7.1□□□□□ -1.27
CACNA1C-216ENST00000399638 HRES1P13985 223 aa7.1□□□□□ -1.27
CACNA1C-216ENST00000399638 CYP4F30PQ9H0H9 118 aa7.1□□□□□ -1.27
CACNA1C-216ENST00000399638 SEC61BP60468 96 aaKnown RBP7.09□□□□□ -1.27
CACNA1C-216ENST00000399638 RANBP2P49792 3224 aaKnown RBP7.09□□□□□ -1.28
CACNA1C-216ENST00000399638 CENPEQ02224 2701 aa7.08□□□□□ -1.28
CACNA1C-216ENST00000399638 HTTP42858 3142 aa7.07□□□□□ -1.28
CACNA1C-216ENST00000399638 SPRR4Q96PI1 79 aa7.06□□□□□ -1.28
CACNA1C-216ENST00000399638 ITPR3Q14573 2671 aa7.06□□□□□ -1.28
CACNA1C-216ENST00000399638 PRR15Q8IV56 129 aa7.06□□□□□ -1.28
CACNA1C-216ENST00000399638 KCNQ1DNQ9H478 68 aa7.04□□□□□ -1.28
CACNA1C-216ENST00000399638 HELZ2Q9BYK8 2649 aaKnown RBP7.03□□□□□ -1.28
CACNA1C-216ENST00000399638 MYO15AQ9UKN7 3530 aa7.03□□□□□ -1.28
CACNA1C-216ENST00000399638 CSAG1Q6PB30 78 aa7.03□□□□□ -1.28
CACNA1C-216ENST00000399638 SPTBN5Q9NRC6 3674 aaKnown RBP7.02□□□□□ -1.29
CACNA1C-216ENST00000399638 FLNAP21333 2647 aaKnown RBP7.02□□□□□ -1.29
CACNA1C-216ENST00000399638 S4R3F8 94 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms