RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 UBE2D2P62837 147 aa4.12□□□□□ -1.75
TRAPPC13-202ENST00000399438 CIRBP-AS1Q8TBR5 109 aa4.12□□□□□ -1.75
TRAPPC13-202ENST00000399438 LECT2O14960 151 aa4.11□□□□□ -1.75
TRAPPC13-202ENST00000399438 RBM3P98179 157 aaKnown RBP4.11□□□□□ -1.75
TRAPPC13-202ENST00000399438 C2orf82Q6UX34 121 aa4.11□□□□□ -1.75
TRAPPC13-202ENST00000399438 Q8NDZ9 215 aa4.11□□□□□ -1.75
TRAPPC13-202ENST00000399438 TENM2Q9NT68 2774 aa4.11□□□□□ -1.75
TRAPPC13-202ENST00000399438 IGLV1-51P01701 117 aa4.11□□□□□ -1.75
TRAPPC13-202ENST00000399438 ANK2Q01484 3957 aa4.11□□□□□ -1.75
TRAPPC13-202ENST00000399438 ASB16-AS1Q495Z4 193 aa4.1□□□□□ -1.75
TRAPPC13-202ENST00000399438 SMCR5Q8TEV8 140 aa4.1□□□□□ -1.75
TRAPPC13-202ENST00000399438 A6NED7 52 aa4.1□□□□□ -1.75
TRAPPC13-202ENST00000399438 RETNLBQ9BQ08 111 aa4.1□□□□□ -1.75
TRAPPC13-202ENST00000399438 ICOSQ9Y6W8 199 aa4.1□□□□□ -1.75
TRAPPC13-202ENST00000399438 STAB2Q8WWQ8 2551 aa4.09□□□□□ -1.75
TRAPPC13-202ENST00000399438 PRB2P02812 416 aaPredicted RBP4.09□□□□□ -1.75
TRAPPC13-202ENST00000399438 LINC00158P58513 81 aa4.09□□□□□ -1.75
TRAPPC13-202ENST00000399438 MIAQ16674 131 aa4.09□□□□□ -1.76
TRAPPC13-202ENST00000399438 C9orf116Q5BN46 136 aaPredicted RBP4.09□□□□□ -1.76
TRAPPC13-202ENST00000399438 CDC42SE2Q9NRR3 84 aa4.09□□□□□ -1.76
TRAPPC13-202ENST00000399438 Q1T7F1 81 aa4.08□□□□□ -1.76
TRAPPC13-202ENST00000399438 MIR7-3HGQ8N6C7 128 aa4.08□□□□□ -1.76
TRAPPC13-202ENST00000399438 SERP2Q8N6R1 65 aa4.08□□□□□ -1.76
TRAPPC13-202ENST00000399438 LINC00308Q8TCZ7 52 aa4.08□□□□□ -1.76
TRAPPC13-202ENST00000399438 A8MTW9 85 aa4.08□□□□□ -1.76
TRAPPC13-202ENST00000399438 K7ERS5 55 aa4.08□□□□□ -1.76
TRAPPC13-202ENST00000399438 KRTAP24-1Q3LI83 254 aa4.08□□□□□ -1.76
TRAPPC13-202ENST00000399438 SLPIP03973 132 aa4.07□□□□□ -1.76
TRAPPC13-202ENST00000399438 S100A7L2Q5SY68 101 aa4.07□□□□□ -1.76
TRAPPC13-202ENST00000399438 Q8N814 137 aa4.07□□□□□ -1.76
TRAPPC13-202ENST00000399438 KRTAP3-1Q9BYR8 98 aa4.07□□□□□ -1.76
TRAPPC13-202ENST00000399438 H7C423 109 aa4.06□□□□□ -1.76
TRAPPC13-202ENST00000399438 RPL28P46779 137 aaKnown RBP4.06□□□□□ -1.76
TRAPPC13-202ENST00000399438 C16orf74Q96GX8 76 aa4.06□□□□□ -1.76
TRAPPC13-202ENST00000399438 LINC01600Q96MT4 127 aa4.06□□□□□ -1.76
TRAPPC13-202ENST00000399438 LYPD5Q6UWN5 251 aa4.06□□□□□ -1.76
TRAPPC13-202ENST00000399438 LINC00269Q8N2A0 174 aa4.06□□□□□ -1.76
TRAPPC13-202ENST00000399438 C1orf64Q8NEQ6 169 aa4.06□□□□□ -1.76
TRAPPC13-202ENST00000399438 UBE2WQ96B02 151 aa4.06□□□□□ -1.76
TRAPPC13-202ENST00000399438 TRBV6-8A0A0A6YYG3 113 aa4.06□□□□□ -1.76
TRAPPC13-202ENST00000399438 A0A0B4J2C4 111 aa4.06□□□□□ -1.76
TRAPPC13-202ENST00000399438 NDUFA1O15239 70 aa4.06□□□□□ -1.76
TRAPPC13-202ENST00000399438 ATXN8Q156A1 80 aa4.06□□□□□ -1.76
TRAPPC13-202ENST00000399438 ANGP03950 147 aaKnown RBP4.05□□□□□ -1.76
TRAPPC13-202ENST00000399438 SYCNQ0VAF6 134 aa4.05□□□□□ -1.76
TRAPPC13-202ENST00000399438 FAM229BQ4G0N7 80 aa4.05□□□□□ -1.76
TRAPPC13-202ENST00000399438 C9orf129Q5T035 196 aaKnown RBP4.05□□□□□ -1.76
TRAPPC13-202ENST00000399438 COX7B2Q8TF08 81 aa4.05□□□□□ -1.76
TRAPPC13-202ENST00000399438 ROMO1P60602 79 aa4.04□□□□□ -1.76
TRAPPC13-202ENST00000399438 SDIM1Q6ZPB5 146 aa4.04□□□□□ -1.76
TRAPPC13-202ENST00000399438 Q8N377 158 aa4.04□□□□□ -1.76
TRAPPC13-202ENST00000399438 A0A087WYN8 130 aa4.03□□□□□ -1.76
TRAPPC13-202ENST00000399438 TRBV10-1A0A0K0K1A3 114 aa4.03□□□□□ -1.76
TRAPPC13-202ENST00000399438 COX6CP09669 75 aa4.03□□□□□ -1.76
TRAPPC13-202ENST00000399438 LINC00959A0A1B0GUT2 108 aa4.03□□□□□ -1.76
TRAPPC13-202ENST00000399438 CCL18P55774 89 aa4.03□□□□□ -1.76
TRAPPC13-202ENST00000399438 IGKV2-28A0A075B6P5 120 aa4.02□□□□□ -1.77
TRAPPC13-202ENST00000399438 IGKV2D-28P01615 120 aa4.02□□□□□ -1.77
TRAPPC13-202ENST00000399438 TRBV30A0A0K0K1B3 111 aa4.02□□□□□ -1.77
TRAPPC13-202ENST00000399438 TRBV10-2A0A0K0K1G8 114 aa4.02□□□□□ -1.77
TRAPPC13-202ENST00000399438 TRBV6-4A0A1B0GX49 114 aa4.02□□□□□ -1.77
TRAPPC13-202ENST00000399438 NCR3O14931 201 aa4.02□□□□□ -1.77
TRAPPC13-202ENST00000399438 KLK12Q9UKR0 248 aa4.02□□□□□ -1.77
TRAPPC13-202ENST00000399438 A8MUU9 505 aa4.02□□□□□ -1.77
TRAPPC13-202ENST00000399438 CRPP02741 224 aa4.02□□□□□ -1.77
TRAPPC13-202ENST00000399438 Q6ZTC4 211 aa4.02□□□□□ -1.77
TRAPPC13-202ENST00000399438 C16orf90A8MZG2 172 aa4.01□□□□□ -1.77
TRAPPC13-202ENST00000399438 MUC7Q8TAX7 377 aa4.01□□□□□ -1.77
TRAPPC13-202ENST00000399438 SMIM11BQ8TCY0 68 aa4.01□□□□□ -1.77
TRAPPC13-202ENST00000399438 HIGD2BQ4VC39 106 aa4.01□□□□□ -1.77
TRAPPC13-202ENST00000399438 C1orf134Q5TEV5 83 aa4.01□□□□□ -1.77
TRAPPC13-202ENST00000399438 IGLV7-46A0A075B6I9 117 aa4□□□□□ -1.77
TRAPPC13-202ENST00000399438 BAALC-AS2P0C853 105 aa4□□□□□ -1.77
TRAPPC13-202ENST00000399438 C14orf132Q9NPU4 83 aa4□□□□□ -1.77
TRAPPC13-202ENST00000399438 H7BZZ5 65 aa4□□□□□ -1.77
TRAPPC13-202ENST00000399438 PRO0255Q9UI72 69 aa4□□□□□ -1.77
TRAPPC13-202ENST00000399438 UNQ6190/PRO20217Q6UXQ8 127 aa4□□□□□ -1.77
TRAPPC13-202ENST00000399438 hDV103S1A0JD37 113 aa3.99□□□□□ -1.77
TRAPPC13-202ENST00000399438 LYSTQ99698 3801 aa3.99□□□□□ -1.77
TRAPPC13-202ENST00000399438 SRRM2Q9UQ35 2752 aaKnown RBP3.99□□□□□ -1.77
TRAPPC13-202ENST00000399438 KRTAP21-3Q3LHN1 58 aa3.99□□□□□ -1.77
TRAPPC13-202ENST00000399438 WFDC10BQ8IUB3 73 aa3.98□□□□□ -1.77
TRAPPC13-202ENST00000399438 CMYA5Q8N3K9 4069 aa3.97□□□□□ -1.77
TRAPPC13-202ENST00000399438 IGKV3D-7A0A0C4DH55 119 aa3.97□□□□□ -1.77
TRAPPC13-202ENST00000399438 DNAL4O96015 105 aa3.97□□□□□ -1.77
TRAPPC13-202ENST00000399438 KRTAP10-11P60412 298 aa3.97□□□□□ -1.77
TRAPPC13-202ENST00000399438 ESRGQ1W209 222 aa3.97□□□□□ -1.77
TRAPPC13-202ENST00000399438 WFDC9Q8NEX5 89 aa3.97□□□□□ -1.77
TRAPPC13-202ENST00000399438 C22orf24Q9Y442 160 aa3.97□□□□□ -1.77
TRAPPC13-202ENST00000399438 COL7A1Q02388 2944 aa3.97□□□□□ -1.77
TRAPPC13-202ENST00000399438 Q6ZQT0 140 aa3.97□□□□□ -1.77
TRAPPC13-202ENST00000399438 DNAH10OSP0CZ25 163 aa3.97□□□□□ -1.77
TRAPPC13-202ENST00000399438 Q8NAQ8 132 aa3.97□□□□□ -1.77
TRAPPC13-202ENST00000399438 TRAV13-2A0A0B4J235 113 aa3.96□□□□□ -1.78
TRAPPC13-202ENST00000399438 SPAG11BQ08648 103 aa3.96□□□□□ -1.78
TRAPPC13-202ENST00000399438 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.95□□□□□ -1.78
TRAPPC13-202ENST00000399438 A0A087WVE0 104 aa3.95□□□□□ -1.78
TRAPPC13-202ENST00000399438 A0A1B0GUV1 79 aa3.95□□□□□ -1.78
TRAPPC13-202ENST00000399438 TRAV7A0A075B6U4 112 aa3.95□□□□□ -1.78
TRAPPC13-202ENST00000399438 NDUFC1O43677 76 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms