RNA–Protein interactions for RNA: ENST00000398631.2

PCDHA12-201, Transcript of protocadherin alpha 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA12, Length 5,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-201ENST00000398631 Q96NJ1 140 aa10.71□□□□□ -0.69
PCDHA12-201ENST00000398631 CENPEQ02224 2701 aa10.71□□□□□ -0.7
PCDHA12-201ENST00000398631 A8MWP4 228 aa10.7□□□□□ -0.7
PCDHA12-201ENST00000398631 KRTAP1-3Q8IUG1 177 aa10.7□□□□□ -0.7
PCDHA12-201ENST00000398631 CFAP46Q8IYW2 2715 aa10.69□□□□□ -0.7
PCDHA12-201ENST00000398631 ATP11AUNQ6ZP68 121 aa10.69□□□□□ -0.7
PCDHA12-201ENST00000398631 A0A087WTM6 91 aa10.68□□□□□ -0.7
PCDHA12-201ENST00000398631 C9orf163Q8N9P6 203 aa10.68□□□□□ -0.7
PCDHA12-201ENST00000398631 DNAH12Q6ZR08 3092 aa10.68□□□□□ -0.7
PCDHA12-201ENST00000398631 EIF4EBP3O60516 100 aaPredicted RBP10.67□□□□□ -0.7
PCDHA12-201ENST00000398631 J3QL48 77 aa10.67□□□□□ -0.7
PCDHA12-201ENST00000398631 LOC101927531A0A1B0GV80 90 aa10.66□□□□□ -0.7
PCDHA12-201ENST00000398631 ZNF861PO60384 105 aa10.66□□□□□ -0.7
PCDHA12-201ENST00000398631 MRPL34Q9BQ48 92 aaKnown RBP10.65□□□□□ -0.7
PCDHA12-201ENST00000398631 KRTAP1-1Q07627 177 aa10.65□□□□□ -0.7
PCDHA12-201ENST00000398631 SSBP3-AS1Q7Z2R9 100 aa10.65□□□□□ -0.7
PCDHA12-201ENST00000398631 SPAG11AQ6PDA7 123 aa10.65□□□□□ -0.7
PCDHA12-201ENST00000398631 K7EQZ3 153 aa10.64□□□□□ -0.71
PCDHA12-201ENST00000398631 TLX1NBP0CAT3 122 aa10.64□□□□□ -0.71
PCDHA12-201ENST00000398631 C9orf129Q5T035 196 aaKnown RBP10.64□□□□□ -0.71
PCDHA12-201ENST00000398631 IGFL1Q6UW32 110 aa10.63□□□□□ -0.71
PCDHA12-201ENST00000398631 STAB1Q9NY15 2570 aa10.61□□□□□ -0.71
PCDHA12-201ENST00000398631 PLA2G2DQ9UNK4 145 aa10.6□□□□□ -0.71
PCDHA12-201ENST00000398631 CEP350Q5VT06 3117 aa10.6□□□□□ -0.71
PCDHA12-201ENST00000398631 LINC00304Q8N9R0 145 aa10.59□□□□□ -0.71
PCDHA12-201ENST00000398631 Q8N377 158 aa10.58□□□□□ -0.72
PCDHA12-201ENST00000398631 APLNQ9ULZ1 77 aa10.57□□□□□ -0.72
PCDHA12-201ENST00000398631 KLKP1Q107X0 134 aa10.56□□□□□ -0.72
PCDHA12-201ENST00000398631 CYP4F30PQ9H0H9 118 aa10.56□□□□□ -0.72
PCDHA12-201ENST00000398631 PRR15Q8IV56 129 aa10.55□□□□□ -0.72
PCDHA12-201ENST00000398631 C8orf17Q9NRJ1 99 aa10.54□□□□□ -0.72
PCDHA12-201ENST00000398631 LINC00336Q6ZUF6 198 aa10.54□□□□□ -0.72
PCDHA12-201ENST00000398631 SMR3BP02814 79 aaPredicted RBP10.53□□□□□ -0.72
PCDHA12-201ENST00000398631 CNBPP62633 177 aaKnown RBP10.53□□□□□ -0.72
PCDHA12-201ENST00000398631 ZNF575Q86XF7 245 aa10.52□□□□□ -0.72
PCDHA12-201ENST00000398631 DSCR10P59022 87 aa10.52□□□□□ -0.73
PCDHA12-201ENST00000398631 CASC10Q5T4H9 136 aa10.52□□□□□ -0.73
PCDHA12-201ENST00000398631 SETXQ7Z333 2677 aaKnown RBP10.51□□□□□ -0.73
PCDHA12-201ENST00000398631 A0A1W2PNN7 141 aa10.51□□□□□ -0.73
PCDHA12-201ENST00000398631 IGLV7-43P04211 117 aa10.51□□□□□ -0.73
PCDHA12-201ENST00000398631 A0A1B0GVX0 72 aa10.51□□□□□ -0.73
PCDHA12-201ENST00000398631 PSORS1C2Q9UIG4 136 aa10.5□□□□□ -0.73
PCDHA12-201ENST00000398631 IGLV8-61A0A075B6I0 122 aa10.49□□□□□ -0.73
PCDHA12-201ENST00000398631 COA5Q86WW8 74 aa10.48□□□□□ -0.73
PCDHA12-201ENST00000398631 AKAP13Q12802 2813 aa10.48□□□□□ -0.73
PCDHA12-201ENST00000398631 OBSCN-AS1Q96MR7 158 aa10.48□□□□□ -0.73
PCDHA12-201ENST00000398631 COX6B2Q6YFQ2 88 aa10.47□□□□□ -0.73
PCDHA12-201ENST00000398631 TEP1Q99973 2627 aaKnown RBP10.47□□□□□ -0.73
PCDHA12-201ENST00000398631 ANAPC11Q9NYG5 84 aa10.47□□□□□ -0.73
PCDHA12-201ENST00000398631 A0A0G2JQZ4 141 aa10.47□□□□□ -0.73
PCDHA12-201ENST00000398631 A8MUN3 132 aa10.46□□□□□ -0.73
PCDHA12-201ENST00000398631 SPRR4Q96PI1 79 aa10.46□□□□□ -0.74
PCDHA12-201ENST00000398631 CHD7Q9P2D1 2997 aa10.45□□□□□ -0.74
PCDHA12-201ENST00000398631 LINC01600Q96MT4 127 aa10.43□□□□□ -0.74
PCDHA12-201ENST00000398631 C9orf92A6NGG3 77 aa10.42□□□□□ -0.74
PCDHA12-201ENST00000398631 H7BZZ5 65 aa10.41□□□□□ -0.74
PCDHA12-201ENST00000398631 UQCR11O14957 56 aa10.4□□□□□ -0.74
PCDHA12-201ENST00000398631 IGLV5-37A0A075B6J1 123 aa10.38□□□□□ -0.75
PCDHA12-201ENST00000398631 A0A1W2PNM2 257 aa10.38□□□□□ -0.75
PCDHA12-201ENST00000398631 TEX15Q9BXT5 2789 aa10.37□□□□□ -0.75
PCDHA12-201ENST00000398631 UTRNP46939 3433 aa10.36□□□□□ -0.75
PCDHA12-201ENST00000398631 WIPF1O43516 503 aa10.34□□□□□ -0.75
PCDHA12-201ENST00000398631 CHD6Q8TD26 2715 aa10.34□□□□□ -0.75
PCDHA12-201ENST00000398631 TNP2Q05952 138 aa10.34□□□□□ -0.75
PCDHA12-201ENST00000398631 COL6A5A8TX70 2615 aa10.33□□□□□ -0.76
PCDHA12-201ENST00000398631 ZNF292O60281 2723 aa10.32□□□□□ -0.76
PCDHA12-201ENST00000398631 IGLV5-48A0A075B6I7 105 aa10.32□□□□□ -0.76
PCDHA12-201ENST00000398631 SPANXA2-OT1Q8N9U9 137 aa10.28□□□□□ -0.76
PCDHA12-201ENST00000398631 CHD9Q3L8U1 2897 aa10.28□□□□□ -0.76
PCDHA12-201ENST00000398631 MIR22HGQ0VDD5 57 aa10.27□□□□□ -0.77
PCDHA12-201ENST00000398631 RBM12B-AS1Q9P1G2 102 aa10.26□□□□□ -0.77
PCDHA12-201ENST00000398631 CR1P17927 2039 aa10.26□□□□□ -0.77
PCDHA12-201ENST00000398631 C5orf42Q9H799 3197 aa10.26□□□□□ -0.77
PCDHA12-201ENST00000398631 SPINT4Q6UDR6 99 aa10.25□□□□□ -0.77
PCDHA12-201ENST00000398631 CD164Q04900 197 aa10.24□□□□□ -0.77
PCDHA12-201ENST00000398631 NBEAL1Q6ZS30 2694 aa10.23□□□□□ -0.77
PCDHA12-201ENST00000398631 RANBP2P49792 3224 aaKnown RBP10.23□□□□□ -0.77
PCDHA12-201ENST00000398631 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.22□□□□□ -0.77
PCDHA12-201ENST00000398631 NOTCH1P46531 2555 aa10.22□□□□□ -0.77
PCDHA12-201ENST00000398631 KTN1-AS1Q86SY8 53 aa10.2□□□□□ -0.78
PCDHA12-201ENST00000398631 MGAQ8IWI9 3026 aa10.19□□□□□ -0.78
PCDHA12-201ENST00000398631 UNC79Q9P2D8 2635 aa10.19□□□□□ -0.78
PCDHA12-201ENST00000398631 FAM104AQ969W3 186 aa10.19□□□□□ -0.78
PCDHA12-201ENST00000398631 Q8N1X5 172 aa10.15□□□□□ -0.79
PCDHA12-201ENST00000398631 LCA10Q71F78 164 aa10.14□□□□□ -0.79
PCDHA12-201ENST00000398631 CRIPTQ9P021 101 aa10.14□□□□□ -0.79
PCDHA12-201ENST00000398631 OCR1Q9BZK8 76 aa10.13□□□□□ -0.79
PCDHA12-201ENST00000398631 PRR26Q8N8Z3 221 aa10.13□□□□□ -0.79
PCDHA12-201ENST00000398631 CDC42SE1Q9NRR8 79 aa10.12□□□□□ -0.79
PCDHA12-201ENST00000398631 FAM229BQ4G0N7 80 aa10.11□□□□□ -0.79
PCDHA12-201ENST00000398631 IGLV7-46A0A075B6I9 117 aa10.1□□□□□ -0.79
PCDHA12-201ENST00000398631 PLAC8Q9NZF1 115 aa10.1□□□□□ -0.79
PCDHA12-201ENST00000398631 PCNTO95613 3336 aa10.09□□□□□ -0.79
PCDHA12-201ENST00000398631 Q1T7F1 81 aa10.08□□□□□ -0.8
PCDHA12-201ENST00000398631 Q6ZSA8 131 aa10.08□□□□□ -0.8
PCDHA12-201ENST00000398631 GCN1Q92616 2671 aaKnown RBP10.08□□□□□ -0.8
PCDHA12-201ENST00000398631 FLG2Q5D862 2391 aaPredicted RBP10.08□□□□□ -0.8
PCDHA12-201ENST00000398631 HTTP42858 3142 aa10.07□□□□□ -0.8
PCDHA12-201ENST00000398631 LINC01554Q52M75 96 aa10.06□□□□□ -0.8
PCDHA12-201ENST00000398631 TRANK1O15050 2925 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms