RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 ACACBO00763 2458 aa8.15□□□□□ -1.11
CCBE1-201ENST00000398179 A8MUU9 505 aa8.14□□□□□ -1.11
CCBE1-201ENST00000398179 CSPG4Q6UVK1 2322 aa8.14□□□□□ -1.11
CCBE1-201ENST00000398179 CPAMD8Q8IZJ3 1885 aa8.13□□□□□ -1.11
CCBE1-201ENST00000398179 SMR3AQ99954 134 aa8.13□□□□□ -1.11
CCBE1-201ENST00000398179 A0A1W2PNN7 141 aa8.12□□□□□ -1.11
CCBE1-201ENST00000398179 PLAC4Q8WY50 150 aa8.12□□□□□ -1.11
CCBE1-201ENST00000398179 LINC00304Q8N9R0 145 aa8.12□□□□□ -1.11
CCBE1-201ENST00000398179 PTPRBP23467 1997 aa8.12□□□□□ -1.11
CCBE1-201ENST00000398179 C2CD3Q4AC94 2353 aa8.11□□□□□ -1.11
CCBE1-201ENST00000398179 IGLV5-48A0A075B6I7 105 aa8.11□□□□□ -1.11
CCBE1-201ENST00000398179 DSCR10P59022 87 aa8.11□□□□□ -1.11
CCBE1-201ENST00000398179 HIVEP2P31629 2446 aa8.1□□□□□ -1.11
CCBE1-201ENST00000398179 SONP18583 2426 aaKnown RBP8.09□□□□□ -1.11
CCBE1-201ENST00000398179 CACNA1AO00555 2505 aa8.09□□□□□ -1.11
CCBE1-201ENST00000398179 CNBPP62633 177 aaKnown RBP8.08□□□□□ -1.12
CCBE1-201ENST00000398179 Q96NJ1 140 aa8.08□□□□□ -1.12
CCBE1-201ENST00000398179 Q8N377 158 aa8.08□□□□□ -1.12
CCBE1-201ENST00000398179 SPG11Q96JI7 2443 aa8.08□□□□□ -1.12
CCBE1-201ENST00000398179 PRR34Q9NV39 138 aa8.07□□□□□ -1.12
CCBE1-201ENST00000398179 PP632Q6XCG6 107 aa8.07□□□□□ -1.12
CCBE1-201ENST00000398179 ANKHD1Q8IWZ3 2542 aaKnown RBP8.06□□□□□ -1.12
CCBE1-201ENST00000398179 H1FX-AS1Q4G0G2 97 aa8.06□□□□□ -1.12
CCBE1-201ENST00000398179 FAM168BA1KXE4 195 aa8.06□□□□□ -1.12
CCBE1-201ENST00000398179 ZCCHC13Q8WW36 166 aaKnown RBP8.06□□□□□ -1.12
CCBE1-201ENST00000398179 SPRR4Q96PI1 79 aa8.06□□□□□ -1.12
CCBE1-201ENST00000398179 MUC4Q99102 2169 aa8.05□□□□□ -1.12
CCBE1-201ENST00000398179 PTPN13Q12923 2485 aa8.05□□□□□ -1.12
CCBE1-201ENST00000398179 ADAMTS20P59510 1910 aa8.04□□□□□ -1.12
CCBE1-201ENST00000398179 A0A1W2PPR1 153 aa8.04□□□□□ -1.12
CCBE1-201ENST00000398179 RTL8CO15255 209 aa8.04□□□□□ -1.12
CCBE1-201ENST00000398179 KRTAP10-9P60411 292 aa8.04□□□□□ -1.12
CCBE1-201ENST00000398179 Q8NDZ9 215 aa8.03□□□□□ -1.12
CCBE1-201ENST00000398179 OTOGLQ3ZCN5 2332 aa8.03□□□□□ -1.12
CCBE1-201ENST00000398179 MYO18BQ8IUG5 2567 aa8.03□□□□□ -1.12
CCBE1-201ENST00000398179 A0A0G2JQZ4 141 aa8.02□□□□□ -1.13
CCBE1-201ENST00000398179 ZNF861PO60384 105 aa8.01□□□□□ -1.13
CCBE1-201ENST00000398179 KRTAP23-1A1A580 65 aa8□□□□□ -1.13
CCBE1-201ENST00000398179 COX6B2Q6YFQ2 88 aa7.99□□□□□ -1.13
CCBE1-201ENST00000398179 A8MU10 97 aa7.95□□□□□ -1.14
CCBE1-201ENST00000398179 PSORS1C2Q9UIG4 136 aa7.95□□□□□ -1.14
CCBE1-201ENST00000398179 Q5W150 140 aa7.95□□□□□ -1.14
CCBE1-201ENST00000398179 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.94□□□□□ -1.14
CCBE1-201ENST00000398179 PIEZO1Q92508 2521 aa7.93□□□□□ -1.14
CCBE1-201ENST00000398179 ZNF575Q86XF7 245 aa7.92□□□□□ -1.14
CCBE1-201ENST00000398179 LCE6AA0A183 80 aa7.92□□□□□ -1.14
CCBE1-201ENST00000398179 Q8N1X5 172 aa7.91□□□□□ -1.14
CCBE1-201ENST00000398179 DOPEY1Q5JWR5 2465 aa7.91□□□□□ -1.14
CCBE1-201ENST00000398179 PANO1I0J062 215 aa7.9□□□□□ -1.15
CCBE1-201ENST00000398179 H3BNG1 76 aa7.89□□□□□ -1.15
CCBE1-201ENST00000398179 MMP24-AS1A0A0U1RRL7 71 aa7.89□□□□□ -1.15
CCBE1-201ENST00000398179 HIVEP3Q5T1R4 2406 aa7.89□□□□□ -1.15
CCBE1-201ENST00000398179 COL4A2P08572 1712 aa7.87□□□□□ -1.15
CCBE1-201ENST00000398179 CCDC168Q8NDH2 2452 aa7.87□□□□□ -1.15
CCBE1-201ENST00000398179 KRTAP11-1Q8IUC1 163 aa7.86□□□□□ -1.15
CCBE1-201ENST00000398179 NCOR2Q9Y618 2525 aa7.86□□□□□ -1.15
CCBE1-201ENST00000398179 ABCA2Q9BZC7 2435 aa7.84□□□□□ -1.16
CCBE1-201ENST00000398179 C9orf92A6NGG3 77 aa7.83□□□□□ -1.16
CCBE1-201ENST00000398179 R4GN34 69 aa7.82□□□□□ -1.16
CCBE1-201ENST00000398179 COL27A1Q8IZC6 1860 aaPredicted RBP7.81□□□□□ -1.16
CCBE1-201ENST00000398179 NBDYA0A0U1RRE5 68 aa7.8□□□□□ -1.16
CCBE1-201ENST00000398179 ANAPC11Q9NYG5 84 aa7.79□□□□□ -1.16
CCBE1-201ENST00000398179 NAV2Q8IVL1 2488 aa7.78□□□□□ -1.16
CCBE1-201ENST00000398179 KLK9Q2XQG4 91 aa7.74□□□□□ -1.17
CCBE1-201ENST00000398179 KRTAP4-16G5E9R7 235 aaPredicted RBP7.74□□□□□ -1.17
CCBE1-201ENST00000398179 PCSK5Q92824 1860 aa7.73□□□□□ -1.17
CCBE1-201ENST00000398179 IGF2RP11717 2491 aa7.72□□□□□ -1.17
CCBE1-201ENST00000398179 LINC00612Q8N6U2 182 aa7.7□□□□□ -1.18
CCBE1-201ENST00000398179 CHD8Q9HCK8 2581 aa7.7□□□□□ -1.18
CCBE1-201ENST00000398179 A0A096LNT2 108 aa7.69□□□□□ -1.18
CCBE1-201ENST00000398179 JMJD1CQ15652 2540 aa7.67□□□□□ -1.18
CCBE1-201ENST00000398179 SRCAPQ6ZRS2 3230 aa7.67□□□□□ -1.18
CCBE1-201ENST00000398179 ZNF462Q96JM2 2506 aa7.66□□□□□ -1.18
CCBE1-201ENST00000398179 PIEZO2Q9H5I5 2752 aa7.64□□□□□ -1.19
CCBE1-201ENST00000398179 FN1P02751 2386 aaKnown RBP7.64□□□□□ -1.19
CCBE1-201ENST00000398179 P0C880 135 aa7.62□□□□□ -1.19
CCBE1-201ENST00000398179 GIG44P09565 113 aaPredicted RBP7.62□□□□□ -1.19
CCBE1-201ENST00000398179 MYO9AB2RTY4 2548 aa7.62□□□□□ -1.19
CCBE1-201ENST00000398179 KRTAP29-1A8MX34 341 aaPredicted RBP7.61□□□□□ -1.19
CCBE1-201ENST00000398179 ZFYVE26Q68DK2 2539 aa7.61□□□□□ -1.19
CCBE1-201ENST00000398179 LINC00472Q9H8W2 130 aa7.59□□□□□ -1.19
CCBE1-201ENST00000398179 S4R3F8 94 aa7.59□□□□□ -1.19
CCBE1-201ENST00000398179 C10orf95Q9H7T3 257 aa7.58□□□□□ -1.2
CCBE1-201ENST00000398179 KRTAP26-1Q6PEX3 210 aa7.58□□□□□ -1.2
CCBE1-201ENST00000398179 PLAC8Q9NZF1 115 aa7.54□□□□□ -1.2
CCBE1-201ENST00000398179 LRRK2Q5S007 2527 aa7.54□□□□□ -1.2
CCBE1-201ENST00000398179 A0A087WTM6 91 aa7.53□□□□□ -1.2
CCBE1-201ENST00000398179 KRTAP24-1Q3LI83 254 aa7.53□□□□□ -1.2
CCBE1-201ENST00000398179 INE1O15225 51 aa7.52□□□□□ -1.21
CCBE1-201ENST00000398179 TLN1Q9Y490 2541 aaKnown RBP7.52□□□□□ -1.21
CCBE1-201ENST00000398179 KRTAP10-11P60412 298 aa7.52□□□□□ -1.21
CCBE1-201ENST00000398179 SMR3BP02814 79 aaPredicted RBP7.5□□□□□ -1.21
CCBE1-201ENST00000398179 TLN2Q9Y4G6 2542 aa7.49□□□□□ -1.21
CCBE1-201ENST00000398179 ABCA12Q86UK0 2595 aa7.48□□□□□ -1.21
CCBE1-201ENST00000398179 FASNP49327 2511 aaKnown RBP7.47□□□□□ -1.21
CCBE1-201ENST00000398179 PRO2289Q9P1D8 64 aa7.45□□□□□ -1.22
CCBE1-201ENST00000398179 CR1P17927 2039 aa7.44□□□□□ -1.22
CCBE1-201ENST00000398179 WDR87Q6ZQQ6 2873 aa7.43□□□□□ -1.22
CCBE1-201ENST00000398179 CEP295Q9C0D2 2601 aa7.43□□□□□ -1.22
CCBE1-201ENST00000398179 SETD2Q9BYW2 2564 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms