RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 MYO15AQ9UKN7 3530 aa7.37□□□□□ -1.23
HPS4-202ENST00000398145 K7EQZ3 153 aa7.37□□□□□ -1.23
HPS4-202ENST00000398145 TP53AIP1Q9HCN2 124 aa7.37□□□□□ -1.23
HPS4-202ENST00000398145 FLNBO75369 2602 aaKnown RBP7.36□□□□□ -1.23
HPS4-202ENST00000398145 TRAV22A0A0B4J277 110 aa7.36□□□□□ -1.23
HPS4-202ENST00000398145 CHD6Q8TD26 2715 aa7.35□□□□□ -1.23
HPS4-202ENST00000398145 MUC3AQ02505 3323 aa7.35□□□□□ -1.23
HPS4-202ENST00000398145 K7ERS5 55 aa7.35□□□□□ -1.23
HPS4-202ENST00000398145 SPEGQ15772 3267 aa7.35□□□□□ -1.23
HPS4-202ENST00000398145 ITPR3Q14573 2671 aa7.35□□□□□ -1.23
HPS4-202ENST00000398145 ATRQ13535 2644 aa7.35□□□□□ -1.23
HPS4-202ENST00000398145 CIRBP-AS1Q8TBR5 109 aa7.35□□□□□ -1.23
HPS4-202ENST00000398145 HECTD1Q9ULT8 2610 aa7.34□□□□□ -1.23
HPS4-202ENST00000398145 SERTAD4-AS1Q5TG53 156 aa7.34□□□□□ -1.23
HPS4-202ENST00000398145 Q8N377 158 aa7.34□□□□□ -1.23
HPS4-202ENST00000398145 MGAM2Q2M2H8 2515 aa7.33□□□□□ -1.24
HPS4-202ENST00000398145 A8MUN3 132 aa7.33□□□□□ -1.24
HPS4-202ENST00000398145 RPL37AP61513 92 aaKnown RBP7.33□□□□□ -1.24
HPS4-202ENST00000398145 SPAG11AQ6PDA7 123 aa7.32□□□□□ -1.24
HPS4-202ENST00000398145 IGLV1-50A0A075B6I6 118 aa7.31□□□□□ -1.24
HPS4-202ENST00000398145 WIPF1O43516 503 aa7.31□□□□□ -1.24
HPS4-202ENST00000398145 FAM168BA1KXE4 195 aa7.3□□□□□ -1.24
HPS4-202ENST00000398145 C15orf56Q8N910 161 aa7.3□□□□□ -1.24
HPS4-202ENST00000398145 DNAH10OSP0CZ25 163 aa7.29□□□□□ -1.24
HPS4-202ENST00000398145 EPM2AB3EWF7 344 aa7.29□□□□□ -1.24
HPS4-202ENST00000398145 REV3LO60673 3130 aa7.28□□□□□ -1.24
HPS4-202ENST00000398145 C16orf90A8MZG2 172 aa7.28□□□□□ -1.24
HPS4-202ENST00000398145 CYSTM1Q9H1C7 97 aa7.28□□□□□ -1.24
HPS4-202ENST00000398145 A8MWP4 228 aa7.28□□□□□ -1.24
HPS4-202ENST00000398145 LINC00588Q9Y4M8 146 aa7.28□□□□□ -1.24
HPS4-202ENST00000398145 NUPR2A6NF83 97 aa7.27□□□□□ -1.25
HPS4-202ENST00000398145 PHF5AQ7RTV0 110 aaKnown RBP7.27□□□□□ -1.25
HPS4-202ENST00000398145 SPTBN5Q9NRC6 3674 aaKnown RBP7.26□□□□□ -1.25
HPS4-202ENST00000398145 IGFL1Q6UW32 110 aa7.26□□□□□ -1.25
HPS4-202ENST00000398145 CYP4F30PQ9H0H9 118 aa7.26□□□□□ -1.25
HPS4-202ENST00000398145 COL6A3P12111 3177 aa7.26□□□□□ -1.25
HPS4-202ENST00000398145 CFAP46Q8IYW2 2715 aa7.26□□□□□ -1.25
HPS4-202ENST00000398145 GCN1Q92616 2671 aaKnown RBP7.26□□□□□ -1.25
HPS4-202ENST00000398145 KALRNO60229 2985 aa7.26□□□□□ -1.25
HPS4-202ENST00000398145 A0A1W2PNM2 257 aa7.26□□□□□ -1.25
HPS4-202ENST00000398145 RETNLBQ9BQ08 111 aa7.26□□□□□ -1.25
HPS4-202ENST00000398145 FRYLO94915 3013 aa7.26□□□□□ -1.25
HPS4-202ENST00000398145 ACYP2P14621 99 aa7.25□□□□□ -1.25
HPS4-202ENST00000398145 MOBPQ13875 183 aa7.25□□□□□ -1.25
HPS4-202ENST00000398145 OCR1Q9BZK8 76 aa7.25□□□□□ -1.25
HPS4-202ENST00000398145 IGLV5-48A0A075B6I7 105 aa7.24□□□□□ -1.25
HPS4-202ENST00000398145 PRR15Q8IV56 129 aa7.24□□□□□ -1.25
HPS4-202ENST00000398145 A0A1B0GU69 56 aa7.23□□□□□ -1.25
HPS4-202ENST00000398145 COA5Q86WW8 74 aa7.23□□□□□ -1.25
HPS4-202ENST00000398145 IGLV5-52A0A0A0MRZ9 124 aa7.23□□□□□ -1.25
HPS4-202ENST00000398145 Q5XG85 94 aa7.22□□□□□ -1.25
HPS4-202ENST00000398145 ADGRG4Q8IZF6 3080 aa7.22□□□□□ -1.25
HPS4-202ENST00000398145 SPINK1P00995 79 aa7.22□□□□□ -1.25
HPS4-202ENST00000398145 TLX1NBP0CAT3 122 aa7.21□□□□□ -1.25
HPS4-202ENST00000398145 CHTF8P0CG12 524 aa7.21□□□□□ -1.26
HPS4-202ENST00000398145 PLA2G2DQ9UNK4 145 aa7.21□□□□□ -1.26
HPS4-202ENST00000398145 LY6G6CO95867 125 aa7.21□□□□□ -1.26
HPS4-202ENST00000398145 UNC79Q9P2D8 2635 aa7.2□□□□□ -1.26
HPS4-202ENST00000398145 A0A0G2JQZ4 141 aa7.2□□□□□ -1.26
HPS4-202ENST00000398145 A0A1W2PNN7 141 aa7.2□□□□□ -1.26
HPS4-202ENST00000398145 CR1P17927 2039 aa7.2□□□□□ -1.26
HPS4-202ENST00000398145 MAST4O15021 2626 aa7.2□□□□□ -1.26
HPS4-202ENST00000398145 IGKV2D-30A0A075B6S6 120 aa7.19□□□□□ -1.26
HPS4-202ENST00000398145 IGKV2-30P06310 120 aa7.19□□□□□ -1.26
HPS4-202ENST00000398145 LOC101927531A0A1B0GV80 90 aa7.19□□□□□ -1.26
HPS4-202ENST00000398145 NBEAL2Q6ZNJ1 2754 aa7.17□□□□□ -1.26
HPS4-202ENST00000398145 Q8NDZ9 215 aa7.17□□□□□ -1.26
HPS4-202ENST00000398145 BOD1L1Q8NFC6 3051 aa7.17□□□□□ -1.26
HPS4-202ENST00000398145 KRTAP10-3P60369 221 aa7.17□□□□□ -1.26
HPS4-202ENST00000398145 MRPL34Q9BQ48 92 aaKnown RBP7.16□□□□□ -1.26
HPS4-202ENST00000398145 ATP11AUNQ6ZP68 121 aa7.16□□□□□ -1.26
HPS4-202ENST00000398145 FP248Q71RG6 208 aaPredicted RBP7.16□□□□□ -1.26
HPS4-202ENST00000398145 SPANXA2-OT1Q8N9U9 137 aa7.15□□□□□ -1.26
HPS4-202ENST00000398145 MDFIQ99750 246 aa7.15□□□□□ -1.27
HPS4-202ENST00000398145 CD164Q04900 197 aa7.14□□□□□ -1.27
HPS4-202ENST00000398145 Q1T7F1 81 aa7.13□□□□□ -1.27
HPS4-202ENST00000398145 HELZ2Q9BYK8 2649 aaKnown RBP7.13□□□□□ -1.27
HPS4-202ENST00000398145 OXTP01178 125 aa7.13□□□□□ -1.27
HPS4-202ENST00000398145 C1orf134Q5TEV5 83 aa7.13□□□□□ -1.27
HPS4-202ENST00000398145 C8orf17Q9NRJ1 99 aa7.13□□□□□ -1.27
HPS4-202ENST00000398145 DSCR10P59022 87 aa7.13□□□□□ -1.27
HPS4-202ENST00000398145 KRTAP1-3Q8IUG1 177 aa7.13□□□□□ -1.27
HPS4-202ENST00000398145 SPRR4Q96PI1 79 aa7.13□□□□□ -1.27
HPS4-202ENST00000398145 C7orf65Q6ZTY9 151 aa7.12□□□□□ -1.27
HPS4-202ENST00000398145 DMDP11532 3685 aa7.12□□□□□ -1.27
HPS4-202ENST00000398145 KRTAP24-1Q3LI83 254 aa7.11□□□□□ -1.27
HPS4-202ENST00000398145 NBDYA0A0U1RRE5 68 aa7.11□□□□□ -1.27
HPS4-202ENST00000398145 C8orf87E5RJ46 101 aa7.11□□□□□ -1.27
HPS4-202ENST00000398145 TACC2O95359 2948 aa7.11□□□□□ -1.27
HPS4-202ENST00000398145 LINC00313P59037 77 aa7.11□□□□□ -1.27
HPS4-202ENST00000398145 IGLV5-37A0A075B6J1 123 aa7.1□□□□□ -1.27
HPS4-202ENST00000398145 KTN1-AS1Q86SY8 53 aa7.09□□□□□ -1.27
HPS4-202ENST00000398145 FAM229AH3BQW9 127 aa7.09□□□□□ -1.27
HPS4-202ENST00000398145 CASC10Q5T4H9 136 aa7.09□□□□□ -1.27
HPS4-202ENST00000398145 A0A1B0GVX0 72 aa7.09□□□□□ -1.28
HPS4-202ENST00000398145 SPACA4Q8TDM5 124 aa7.09□□□□□ -1.28
HPS4-202ENST00000398145 KRTAP10-11P60412 298 aa7.08□□□□□ -1.28
HPS4-202ENST00000398145 FAM229BQ4G0N7 80 aa7.08□□□□□ -1.28
HPS4-202ENST00000398145 ATMQ13315 3056 aa7.08□□□□□ -1.28
HPS4-202ENST00000398145 TEX15Q9BXT5 2789 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms