RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 DIRC1Q969H9 104 aa15.39■□□□□ 0.05
TMEM55B-202ENST00000398020 IFITM1P13164 125 aa15.38■□□□□ 0.05
TMEM55B-202ENST00000398020 FAM19A1Q7Z5A9 133 aa15.38■□□□□ 0.05
TMEM55B-202ENST00000398020 A0A1B0GV90 55 aa15.38■□□□□ 0.05
TMEM55B-202ENST00000398020 PRLHP81277 87 aa15.38■□□□□ 0.05
TMEM55B-202ENST00000398020 KCNQ1DNQ9H478 68 aa15.38■□□□□ 0.05
TMEM55B-202ENST00000398020 H0Y9J4 135 aa15.37■□□□□ 0.05
TMEM55B-202ENST00000398020 PRYO14603 147 aa15.37■□□□□ 0.05
TMEM55B-202ENST00000398020 RPL28P46779 137 aaKnown RBP15.37■□□□□ 0.05
TMEM55B-202ENST00000398020 KRTAP29-1A8MX34 341 aaPredicted RBP15.36■□□□□ 0.05
TMEM55B-202ENST00000398020 IGLV6-57P01721 117 aa15.36■□□□□ 0.05
TMEM55B-202ENST00000398020 COPS9Q8WXC6 57 aa15.36■□□□□ 0.05
TMEM55B-202ENST00000398020 KRTAP13-1Q8IUC0 172 aa15.35■□□□□ 0.05
TMEM55B-202ENST00000398020 CEND1Q8N111 149 aa15.35■□□□□ 0.05
TMEM55B-202ENST00000398020 OXTP01178 125 aa15.34■□□□□ 0.05
TMEM55B-202ENST00000398020 OR13C6PQ8NH95 151 aa15.34■□□□□ 0.05
TMEM55B-202ENST00000398020 HIST1H4GQ99525 98 aa15.34■□□□□ 0.05
TMEM55B-202ENST00000398020 DMBT1Q9UGM3 2413 aaPredicted RBP15.34■□□□□ 0.05
TMEM55B-202ENST00000398020 J3QL48 77 aa15.32■□□□□ 0.04
TMEM55B-202ENST00000398020 LINC00337Q8N6G1 96 aa15.32■□□□□ 0.04
TMEM55B-202ENST00000398020 FXYD2P54710 66 aa15.32■□□□□ 0.04
TMEM55B-202ENST00000398020 SPRR1AP35321 89 aa15.31■□□□□ 0.04
TMEM55B-202ENST00000398020 PPDPFQ9H3Y8 114 aa15.31■□□□□ 0.04
TMEM55B-202ENST00000398020 A6NDN8 102 aa15.3■□□□□ 0.04
TMEM55B-202ENST00000398020 TRAV23DV6A0A075B6W5 121 aa15.29■□□□□ 0.04
TMEM55B-202ENST00000398020 ETDCA0A1B0GVM5 59 aa15.28■□□□□ 0.04
TMEM55B-202ENST00000398020 TAX1BP3O14907 124 aa15.28■□□□□ 0.04
TMEM55B-202ENST00000398020 KRTAP4-16G5E9R7 235 aaPredicted RBP15.28■□□□□ 0.04
TMEM55B-202ENST00000398020 LINC01600Q96MT4 127 aa15.27■□□□□ 0.03
TMEM55B-202ENST00000398020 HIGD2AQ9BW72 106 aa15.25■□□□□ 0.03
TMEM55B-202ENST00000398020 A4D1N5 150 aa15.23■□□□□ 0.03
TMEM55B-202ENST00000398020 ZNF73O43830 326 aaPredicted RBP15.23■□□□□ 0.03
TMEM55B-202ENST00000398020 KRTAP1-4P0C5Y4 121 aa15.23■□□□□ 0.03
TMEM55B-202ENST00000398020 MT1HL1P0DM35 61 aa15.22■□□□□ 0.03
TMEM55B-202ENST00000398020 B5MCH6 92 aa15.22■□□□□ 0.03
TMEM55B-202ENST00000398020 NHP2Q9NX24 153 aaKnown RBP15.2■□□□□ 0.02
TMEM55B-202ENST00000398020 HERC1Q15751 4861 aa15.2■□□□□ 0.02
TMEM55B-202ENST00000398020 A0A1B0GWB2 263 aa15.19■□□□□ 0.02
TMEM55B-202ENST00000398020 CBY1Q9Y3M2 126 aa15.19■□□□□ 0.02
TMEM55B-202ENST00000398020 PRR26Q8N8Z3 221 aa15.17■□□□□ 0.02
TMEM55B-202ENST00000398020 ANAPC11Q9NYG5 84 aa15.17■□□□□ 0.02
TMEM55B-202ENST00000398020 TNXBP22105 4242 aa15.17■□□□□ 0.02
TMEM55B-202ENST00000398020 TRAV13-2A0A0B4J235 113 aa15.16■□□□□ 0.02
TMEM55B-202ENST00000398020 TMEM238LA0A1B0GVL6 79 aa15.16■□□□□ 0.02
TMEM55B-202ENST00000398020 A6NJY4 79 aa15.16■□□□□ 0.02
TMEM55B-202ENST00000398020 Q6ZRX8 168 aa15.16■□□□□ 0.02
TMEM55B-202ENST00000398020 SMCR5Q8TEV8 140 aa15.16■□□□□ 0.02
TMEM55B-202ENST00000398020 K7ERJ3 54 aa15.16■□□□□ 0.02
TMEM55B-202ENST00000398020 C9orf118A6NHY6 69 aa15.14■□□□□ 0.01
TMEM55B-202ENST00000398020 C6orf99Q4VX62 202 aa15.14■□□□□ 0.01
TMEM55B-202ENST00000398020 RAB37Q96AX2 223 aa15.14■□□□□ 0.01
TMEM55B-202ENST00000398020 Q9BRP9 147 aa15.14■□□□□ 0.01
TMEM55B-202ENST00000398020 KRTAP10-8P60410 259 aa15.13■□□□□ 0.01
TMEM55B-202ENST00000398020 ERC2-IT1O76042 136 aa15.11■□□□□ 0.01
TMEM55B-202ENST00000398020 A0A087X002 238 aa15.09■□□□□ 0.01
TMEM55B-202ENST00000398020 SMIM11BQ8TCY0 68 aa15.09■□□□□ 0.01
TMEM55B-202ENST00000398020 H3BUT2 72 aa15.07■□□□□ 0
TMEM55B-202ENST00000398020 CFC1BP0CG36 223 aa15.07■□□□□ 0
TMEM55B-202ENST00000398020 CFC1P0CG37 223 aa15.07■□□□□ 0
TMEM55B-202ENST00000398020 COX7BP24311 80 aa15.06■□□□□ 0
TMEM55B-202ENST00000398020 RPL13AP40429 203 aaKnown RBP15.06■□□□□ 0
TMEM55B-202ENST00000398020 SPRR4Q96PI1 79 aa15.06■□□□□ 0
TMEM55B-202ENST00000398020 ELOF1P60002 83 aaKnown RBP15.06■□□□□ 0
TMEM55B-202ENST00000398020 VAMP3Q15836 100 aa15.05■□□□□ -0
TMEM55B-202ENST00000398020 NAA38Q9BRA0 125 aaKnown RBP15.05■□□□□ -0
TMEM55B-202ENST00000398020 CRYGAP11844 174 aa15.03■□□□□ -0
TMEM55B-202ENST00000398020 ZNF706Q9Y5V0 76 aaPredicted RBP15.03■□□□□ -0
TMEM55B-202ENST00000398020 A0A0B4J2C4 111 aa15.02□□□□□ -0.01
TMEM55B-202ENST00000398020 A0A1W2PPM0 123 aa15.02□□□□□ -0.01
TMEM55B-202ENST00000398020 FAM229BQ4G0N7 80 aa15□□□□□ -0.01
TMEM55B-202ENST00000398020 TRBV7-6A0A0J9YX20 115 aa15□□□□□ -0.01
TMEM55B-202ENST00000398020 H7C2G1 150 aa15□□□□□ -0.01
TMEM55B-202ENST00000398020 UBE2V1Q13404 147 aa15□□□□□ -0.01
TMEM55B-202ENST00000398020 KRTAP13-2Q52LG2 175 aa15□□□□□ -0.01
TMEM55B-202ENST00000398020 GAGE2AQ6NT46 116 aa15□□□□□ -0.01
TMEM55B-202ENST00000398020 PRO1854Q9UHT4 67 aa15□□□□□ -0.01
TMEM55B-202ENST00000398020 ST20-AS1Q8NBB2 130 aa14.99□□□□□ -0.01
TMEM55B-202ENST00000398020 DHRS4-AS1Q9P1J3 65 aa14.99□□□□□ -0.01
TMEM55B-202ENST00000398020 TSPAN13O95857 204 aa14.97□□□□□ -0.01
TMEM55B-202ENST00000398020 FABP2P12104 132 aa14.97□□□□□ -0.01
TMEM55B-202ENST00000398020 TYMSOSQ8TAI1 123 aa14.96□□□□□ -0.01
TMEM55B-202ENST00000398020 C3orf22Q8N5N4 141 aa14.93□□□□□ -0.02
TMEM55B-202ENST00000398020 K7EP34 96 aa14.93□□□□□ -0.02
TMEM55B-202ENST00000398020 LINC00483Q53H64 154 aa14.93□□□□□ -0.02
TMEM55B-202ENST00000398020 SPCS1Q9Y6A9 102 aa14.92□□□□□ -0.02
TMEM55B-202ENST00000398020 GTF2H5Q6ZYL4 71 aa14.91□□□□□ -0.02
TMEM55B-202ENST00000398020 Q1RN00 199 aa14.88□□□□□ -0.03
TMEM55B-202ENST00000398020 DEFB105AQ8NG35 78 aa14.86□□□□□ -0.03
TMEM55B-202ENST00000398020 IGLV9-49A0A0B4J1Y8 123 aa14.84□□□□□ -0.03
TMEM55B-202ENST00000398020 LINC00575Q6W349 94 aa14.84□□□□□ -0.03
TMEM55B-202ENST00000398020 SLC25A20O43772 301 aa14.83□□□□□ -0.04
TMEM55B-202ENST00000398020 LYRM7Q5U5X0 104 aa14.82□□□□□ -0.04
TMEM55B-202ENST00000398020 hADV29S1A0JD25 119 aa14.79□□□□□ -0.04
TMEM55B-202ENST00000398020 SPRR1BP22528 89 aa14.79□□□□□ -0.04
TMEM55B-202ENST00000398020 PSMB2P49721 201 aa14.79□□□□□ -0.04
TMEM55B-202ENST00000398020 MOBPQ13875 183 aa14.79□□□□□ -0.04
TMEM55B-202ENST00000398020 LINC00304Q8N9R0 145 aa14.77□□□□□ -0.04
TMEM55B-202ENST00000398020 LINC01547P58512 204 aaPredicted RBP14.77□□□□□ -0.05
TMEM55B-202ENST00000398020 TEX49A0A1B0GTD5 131 aa14.76□□□□□ -0.05
TMEM55B-202ENST00000398020 TRIAP1O43715 76 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms