RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 MOBPQ13875 183 aa10.26□□□□□ -0.77
LSS-202ENST00000397728 TRBV7-7A0A0K0K1E9 115 aa10.25□□□□□ -0.77
LSS-202ENST00000397728 NBEAL2Q6ZNJ1 2754 aa10.24□□□□□ -0.77
LSS-202ENST00000397728 FAM168BA1KXE4 195 aa10.24□□□□□ -0.77
LSS-202ENST00000397728 RPS28P62857 69 aaKnown RBP10.24□□□□□ -0.77
LSS-202ENST00000397728 DEFB116Q30KQ4 102 aa10.24□□□□□ -0.77
LSS-202ENST00000397728 CRYGAP11844 174 aa10.24□□□□□ -0.77
LSS-202ENST00000397728 EPM2AB3EWF7 344 aa10.23□□□□□ -0.77
LSS-202ENST00000397728 PLA2G1BP04054 148 aaKnown RBP10.23□□□□□ -0.77
LSS-202ENST00000397728 KIAA0087Q14695 138 aa10.23□□□□□ -0.77
LSS-202ENST00000397728 SPACA4Q8TDM5 124 aa10.23□□□□□ -0.77
LSS-202ENST00000397728 LIMD2Q9BT23 127 aa10.23□□□□□ -0.77
LSS-202ENST00000397728 TRAV7A0A075B6U4 112 aa10.23□□□□□ -0.77
LSS-202ENST00000397728 SMR3BP02814 79 aaPredicted RBP10.21□□□□□ -0.77
LSS-202ENST00000397728 RPL37AP61513 92 aaKnown RBP10.21□□□□□ -0.77
LSS-202ENST00000397728 C15orf56Q8N910 161 aa10.21□□□□□ -0.77
LSS-202ENST00000397728 CDIP1Q9H305 208 aa10.21□□□□□ -0.77
LSS-202ENST00000397728 LINC00476Q8WZB0 136 aa10.2□□□□□ -0.78
LSS-202ENST00000397728 Q6ZRX8 168 aa10.19□□□□□ -0.78
LSS-202ENST00000397728 LINC00336Q6ZUF6 198 aa10.19□□□□□ -0.78
LSS-202ENST00000397728 APCP25054 2843 aa10.19□□□□□ -0.78
LSS-202ENST00000397728 J3QL48 77 aa10.18□□□□□ -0.78
LSS-202ENST00000397728 CASC10Q5T4H9 136 aa10.18□□□□□ -0.78
LSS-202ENST00000397728 TYMSOSQ8TAI1 123 aa10.18□□□□□ -0.78
LSS-202ENST00000397728 BCE1O60756 84 aa10.18□□□□□ -0.78
LSS-202ENST00000397728 SERTAD4-AS1Q5TG53 156 aa10.17□□□□□ -0.78
LSS-202ENST00000397728 C9orf163Q8N9P6 203 aa10.17□□□□□ -0.78
LSS-202ENST00000397728 MPLKIPQ8TAP9 179 aa10.17□□□□□ -0.78
LSS-202ENST00000397728 VPREB1P12018 145 aa10.17□□□□□ -0.78
LSS-202ENST00000397728 PRO0628Q9UI54 55 aa10.16□□□□□ -0.78
LSS-202ENST00000397728 A0A0U1RQV1 116 aa10.16□□□□□ -0.78
LSS-202ENST00000397728 ELOF1P60002 83 aaKnown RBP10.16□□□□□ -0.78
LSS-202ENST00000397728 LRBAP50851 2863 aa10.15□□□□□ -0.78
LSS-202ENST00000397728 SPEGQ15772 3267 aa10.15□□□□□ -0.78
LSS-202ENST00000397728 ST20-AS1Q8NBB2 130 aa10.15□□□□□ -0.79
LSS-202ENST00000397728 RETNLBQ9BQ08 111 aa10.15□□□□□ -0.79
LSS-202ENST00000397728 FAM30AQ9NZY2 134 aa10.15□□□□□ -0.79
LSS-202ENST00000397728 TENM4Q6N022 2769 aa10.13□□□□□ -0.79
LSS-202ENST00000397728 LINC01547P58512 204 aaPredicted RBP10.12□□□□□ -0.79
LSS-202ENST00000397728 STAB2Q8WWQ8 2551 aa10.12□□□□□ -0.79
LSS-202ENST00000397728 ZNF575Q86XF7 245 aa10.12□□□□□ -0.79
LSS-202ENST00000397728 TRBV7-6A0A0J9YX20 115 aa10.11□□□□□ -0.79
LSS-202ENST00000397728 SEC61GP60059 68 aa10.11□□□□□ -0.79
LSS-202ENST00000397728 TNP2Q05952 138 aa10.11□□□□□ -0.79
LSS-202ENST00000397728 SPTSSBQ8NFR3 76 aa10.1□□□□□ -0.79
LSS-202ENST00000397728 FAM218AQ96MZ4 157 aa10.1□□□□□ -0.79
LSS-202ENST00000397728 USP34Q70CQ2 3546 aa10.09□□□□□ -0.79
LSS-202ENST00000397728 Q8NBF4 154 aa10.08□□□□□ -0.8
LSS-202ENST00000397728 PRO0461Q9UI25 63 aa10.08□□□□□ -0.8
LSS-202ENST00000397728 LITAFQ99732 161 aa10.08□□□□□ -0.8
LSS-202ENST00000397728 IGLV1-50A0A075B6I6 118 aa10.07□□□□□ -0.8
LSS-202ENST00000397728 Q6ZVQ6 151 aa10.07□□□□□ -0.8
LSS-202ENST00000397728 KMT2BQ9UMN6 2715 aaPredicted RBP10.06□□□□□ -0.8
LSS-202ENST00000397728 IGLV6-57P01721 117 aa10.06□□□□□ -0.8
LSS-202ENST00000397728 C9orf129Q5T035 196 aaKnown RBP10.06□□□□□ -0.8
LSS-202ENST00000397728 PRR15LQ9BU68 103 aa10.06□□□□□ -0.8
LSS-202ENST00000397728 ZANQ9Y493 2812 aa10.06□□□□□ -0.8
LSS-202ENST00000397728 Q8N9L7 120 aa10.06□□□□□ -0.8
LSS-202ENST00000397728 PRR4Q16378 134 aa10.05□□□□□ -0.8
LSS-202ENST00000397728 A0A087WVE0 104 aa10.05□□□□□ -0.8
LSS-202ENST00000397728 CRYBG3Q68DQ2 2970 aa10.04□□□□□ -0.8
LSS-202ENST00000397728 SNURFQ9Y675 71 aa10.04□□□□□ -0.8
LSS-202ENST00000397728 LINC00846Q9NV44 126 aa10.04□□□□□ -0.8
LSS-202ENST00000397728 CFAP47Q6ZTR5 3102 aa10.03□□□□□ -0.8
LSS-202ENST00000397728 EIF4EBP3O60516 100 aaPredicted RBP10.03□□□□□ -0.8
LSS-202ENST00000397728 LINC00208Q96KT6 92 aa10.02□□□□□ -0.8
LSS-202ENST00000397728 KCNQ1DNQ9H478 68 aa10.02□□□□□ -0.81
LSS-202ENST00000397728 CNBPP62633 177 aaKnown RBP10.02□□□□□ -0.81
LSS-202ENST00000397728 A0A1W2PNN7 141 aa10.01□□□□□ -0.81
LSS-202ENST00000397728 ZNF861PO60384 105 aa10.01□□□□□ -0.81
LSS-202ENST00000397728 LOC400499M0QZD8 3231 aa10□□□□□ -0.81
LSS-202ENST00000397728 TLX1NBP0CAT3 122 aa10□□□□□ -0.81
LSS-202ENST00000397728 SMCPP49901 116 aaPredicted RBP9.99□□□□□ -0.81
LSS-202ENST00000397728 A6NED7 52 aa9.98□□□□□ -0.81
LSS-202ENST00000397728 PSORS1C2Q9UIG4 136 aa9.98□□□□□ -0.81
LSS-202ENST00000397728 HCG22E2RYF7 251 aa9.97□□□□□ -0.81
LSS-202ENST00000397728 LINC00528Q8N1L1 170 aa9.97□□□□□ -0.81
LSS-202ENST00000397728 NIPBLQ6KC79 2804 aaeCLIP9.96□□□□□ -0.82
LSS-202ENST00000397728 CXCL6P80162 114 aa9.94□□□□□ -0.82
LSS-202ENST00000397728 PMAIP1Q13794 54 aa9.94□□□□□ -0.82
LSS-202ENST00000397728 ANAPC11Q9NYG5 84 aa9.94□□□□□ -0.82
LSS-202ENST00000397728 IGKV2D-30A0A075B6S6 120 aa9.94□□□□□ -0.82
LSS-202ENST00000397728 IGKV2-30P06310 120 aa9.94□□□□□ -0.82
LSS-202ENST00000397728 IGLV7-43P04211 117 aa9.93□□□□□ -0.82
LSS-202ENST00000397728 CELSR2Q9HCU4 2923 aa9.93□□□□□ -0.82
LSS-202ENST00000397728 PCOTHQ58A44 107 aa9.93□□□□□ -0.82
LSS-202ENST00000397728 LINC00304Q8N9R0 145 aa9.91□□□□□ -0.82
LSS-202ENST00000397728 PLA2G2DQ9UNK4 145 aa9.9□□□□□ -0.82
LSS-202ENST00000397728 TMEM254Q8TBM7 123 aa9.89□□□□□ -0.83
LSS-202ENST00000397728 H0Y9P7 68 aa9.88□□□□□ -0.83
LSS-202ENST00000397728 Q6ZQT0 140 aa9.88□□□□□ -0.83
LSS-202ENST00000397728 hDV103S1A0JD37 113 aa9.87□□□□□ -0.83
LSS-202ENST00000397728 LINC00313P59037 77 aa9.87□□□□□ -0.83
LSS-202ENST00000397728 SSBP3-AS1Q7Z2R9 100 aa9.86□□□□□ -0.83
LSS-202ENST00000397728 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.86□□□□□ -0.83
LSS-202ENST00000397728 K7ERS5 55 aa9.86□□□□□ -0.83
LSS-202ENST00000397728 A0A1B0GW54 56 aa9.86□□□□□ -0.83
LSS-202ENST00000397728 SPINK1P00995 79 aa9.85□□□□□ -0.83
LSS-202ENST00000397728 ASH1LQ9NR48 2969 aaKnown RBP9.85□□□□□ -0.83
LSS-202ENST00000397728 Q96NJ1 140 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms