RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 Q6ZTC4 211 aa3.42□□□□□ -1.86
SSR1-202ENST00000397511 COL6A5A8TX70 2615 aa3.41□□□□□ -1.86
SSR1-202ENST00000397511 IGHV4-28A0A0C4DH34 117 aa3.41□□□□□ -1.86
SSR1-202ENST00000397511 Q1T7F1 81 aa3.41□□□□□ -1.86
SSR1-202ENST00000397511 XP32Q5T750 250 aa3.41□□□□□ -1.86
SSR1-202ENST00000397511 CHCHD10Q8WYQ3 142 aaPredicted RBP3.41□□□□□ -1.86
SSR1-202ENST00000397511 KMT2BQ9UMN6 2715 aaPredicted RBP3.41□□□□□ -1.86
SSR1-202ENST00000397511 H3BQ85 93 aa3.41□□□□□ -1.86
SSR1-202ENST00000397511 CMC4P56277 68 aaPredicted RBP3.41□□□□□ -1.86
SSR1-202ENST00000397511 TNP2Q05952 138 aa3.41□□□□□ -1.86
SSR1-202ENST00000397511 REG3AQ06141 175 aa3.41□□□□□ -1.86
SSR1-202ENST00000397511 C9orf66Q5T8R8 295 aa3.41□□□□□ -1.86
SSR1-202ENST00000397511 SCXQ7RTU7 201 aa3.41□□□□□ -1.86
SSR1-202ENST00000397511 KLK12Q9UKR0 248 aa3.41□□□□□ -1.86
SSR1-202ENST00000397511 M0R2N4 97 aa3.4□□□□□ -1.86
SSR1-202ENST00000397511 C10orf25Q5T742 122 aa3.4□□□□□ -1.86
SSR1-202ENST00000397511 LINC00575Q6W349 94 aa3.4□□□□□ -1.86
SSR1-202ENST00000397511 LYSTQ99698 3801 aa3.4□□□□□ -1.86
SSR1-202ENST00000397511 hDV103S1A0JD37 113 aa3.4□□□□□ -1.87
SSR1-202ENST00000397511 NANOS2P60321 138 aaKnown RBP3.4□□□□□ -1.87
SSR1-202ENST00000397511 Q8NDZ9 215 aa3.4□□□□□ -1.87
SSR1-202ENST00000397511 A0A0A0MQY5 61 aa3.4□□□□□ -1.87
SSR1-202ENST00000397511 C6orf99Q4VX62 202 aa3.4□□□□□ -1.87
SSR1-202ENST00000397511 UNQ6190/PRO20217Q6UXQ8 127 aa3.4□□□□□ -1.87
SSR1-202ENST00000397511 XAGE1AQ9HD64 81 aa3.4□□□□□ -1.87
SSR1-202ENST00000397511 MUC7Q8TAX7 377 aa3.39□□□□□ -1.87
SSR1-202ENST00000397511 Q6ZRP5 223 aa3.39□□□□□ -1.87
SSR1-202ENST00000397511 HIGD2AQ9BW72 106 aa3.39□□□□□ -1.87
SSR1-202ENST00000397511 PSPHP1O15172 72 aa3.38□□□□□ -1.87
SSR1-202ENST00000397511 LORP23490 312 aaPredicted RBP3.38□□□□□ -1.87
SSR1-202ENST00000397511 C11orf45Q8TAV5 145 aa3.38□□□□□ -1.87
SSR1-202ENST00000397511 OCR1Q9BZK8 76 aa3.38□□□□□ -1.87
SSR1-202ENST00000397511 LRCOL1A6NCL2 159 aa3.38□□□□□ -1.87
SSR1-202ENST00000397511 LYRM9A8MSI8 78 aa3.38□□□□□ -1.87
SSR1-202ENST00000397511 HIGD2BQ4VC39 106 aa3.38□□□□□ -1.87
SSR1-202ENST00000397511 Q8IZM0 81 aa3.38□□□□□ -1.87
SSR1-202ENST00000397511 A0A1B0GUV1 79 aa3.37□□□□□ -1.87
SSR1-202ENST00000397511 CYSRT1A8MQ03 144 aa3.37□□□□□ -1.87
SSR1-202ENST00000397511 IGHV4-30-4P0DP06 118 aa3.37□□□□□ -1.87
SSR1-202ENST00000397511 UBE2BP63146 152 aa3.37□□□□□ -1.87
SSR1-202ENST00000397511 KIAA0087Q14695 138 aa3.37□□□□□ -1.87
SSR1-202ENST00000397511 TRAV22A0A0B4J277 110 aa3.37□□□□□ -1.87
SSR1-202ENST00000397511 SPAG11BQ08648 103 aa3.37□□□□□ -1.87
SSR1-202ENST00000397511 Q6ZQY7 126 aa3.37□□□□□ -1.87
SSR1-202ENST00000397511 KTN1-AS1Q86SY8 53 aa3.37□□□□□ -1.87
SSR1-202ENST00000397511 C1orf64Q8NEQ6 169 aa3.37□□□□□ -1.87
SSR1-202ENST00000397511 IGKV4-1P06312 121 aa3.36□□□□□ -1.87
SSR1-202ENST00000397511 APOC4P55056 127 aa3.36□□□□□ -1.87
SSR1-202ENST00000397511 WFDC10BQ8IUB3 73 aa3.36□□□□□ -1.87
SSR1-202ENST00000397511 Q8NAQ8 132 aa3.36□□□□□ -1.87
SSR1-202ENST00000397511 PRB2P02812 416 aaPredicted RBP3.36□□□□□ -1.87
SSR1-202ENST00000397511 SPART-AS1P0CW21 52 aa3.36□□□□□ -1.87
SSR1-202ENST00000397511 COX17Q14061 63 aa3.36□□□□□ -1.87
SSR1-202ENST00000397511 LINC00612Q8N6U2 182 aa3.36□□□□□ -1.87
SSR1-202ENST00000397511 RBM12B-AS1Q9P1G2 102 aa3.36□□□□□ -1.87
SSR1-202ENST00000397511 TENM2Q9NT68 2774 aa3.36□□□□□ -1.87
SSR1-202ENST00000397511 Q8N9L7 120 aa3.35□□□□□ -1.87
SSR1-202ENST00000397511 COX7BP24311 80 aa3.35□□□□□ -1.87
SSR1-202ENST00000397511 UBE2AP49459 152 aa3.34□□□□□ -1.87
SSR1-202ENST00000397511 SYCNQ0VAF6 134 aa3.34□□□□□ -1.87
SSR1-202ENST00000397511 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.34□□□□□ -1.87
SSR1-202ENST00000397511 MDFIQ99750 246 aa3.34□□□□□ -1.87
SSR1-202ENST00000397511 MGAM2Q2M2H8 2515 aa3.34□□□□□ -1.88
SSR1-202ENST00000397511 A8MUN3 132 aa3.34□□□□□ -1.88
SSR1-202ENST00000397511 NDUFS5O43920 106 aa3.34□□□□□ -1.88
SSR1-202ENST00000397511 PLA2G1BP04054 148 aaKnown RBP3.34□□□□□ -1.88
SSR1-202ENST00000397511 LINC00588Q9Y4M8 146 aa3.34□□□□□ -1.88
SSR1-202ENST00000397511 PSCAO43653 123 aa3.33□□□□□ -1.88
SSR1-202ENST00000397511 KPRPQ5T749 579 aaPredicted RBP3.33□□□□□ -1.88
SSR1-202ENST00000397511 CYP4F30PQ9H0H9 118 aa3.33□□□□□ -1.88
SSR1-202ENST00000397511 C6orf48Q9UBA6 75 aa3.33□□□□□ -1.88
SSR1-202ENST00000397511 LCE6AA0A183 80 aa3.32□□□□□ -1.88
SSR1-202ENST00000397511 M0R378 163 aa3.32□□□□□ -1.88
SSR1-202ENST00000397511 LELP1Q5T871 98 aa3.32□□□□□ -1.88
SSR1-202ENST00000397511 DIRC1Q969H9 104 aa3.32□□□□□ -1.88
SSR1-202ENST00000397511 CAMK2N2Q96S95 79 aa3.32□□□□□ -1.88
SSR1-202ENST00000397511 IGKV2D-24A0A075B6R9 120 aa3.32□□□□□ -1.88
SSR1-202ENST00000397511 SMIM29Q86T20 159 aa3.32□□□□□ -1.88
SSR1-202ENST00000397511 CHKB-CPT1BH3BT56 60 aa3.32□□□□□ -1.88
SSR1-202ENST00000397511 IGLV6-57P01721 117 aa3.32□□□□□ -1.88
SSR1-202ENST00000397511 KRTAP10-11P60412 298 aa3.32□□□□□ -1.88
SSR1-202ENST00000397511 SPTSSBQ8NFR3 76 aa3.32□□□□□ -1.88
SSR1-202ENST00000397511 SRRM2Q9UQ35 2752 aaKnown RBP3.32□□□□□ -1.88
SSR1-202ENST00000397511 A0A0J9YWU9 116 aa3.31□□□□□ -1.88
SSR1-202ENST00000397511 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.31□□□□□ -1.88
SSR1-202ENST00000397511 Q5VV11 94 aa3.31□□□□□ -1.88
SSR1-202ENST00000397511 DEFB105AQ8NG35 78 aa3.31□□□□□ -1.88
SSR1-202ENST00000397511 DNAH10Q8IVF4 4471 aa3.31□□□□□ -1.88
SSR1-202ENST00000397511 ATP11AUNQ6ZP68 121 aa3.31□□□□□ -1.88
SSR1-202ENST00000397511 ZCCHC13Q8WW36 166 aaKnown RBP3.31□□□□□ -1.88
SSR1-202ENST00000397511 CMYA5Q8N3K9 4069 aa3.31□□□□□ -1.88
SSR1-202ENST00000397511 NDUFB1O75438 58 aa3.31□□□□□ -1.88
SSR1-202ENST00000397511 LIMD2Q9BT23 127 aa3.31□□□□□ -1.88
SSR1-202ENST00000397511 COL7A1Q02388 2944 aa3.3□□□□□ -1.88
SSR1-202ENST00000397511 ETDCA0A1B0GVM5 59 aa3.3□□□□□ -1.88
SSR1-202ENST00000397511 A8MU10 97 aa3.3□□□□□ -1.88
SSR1-202ENST00000397511 PRR4Q16378 134 aa3.3□□□□□ -1.88
SSR1-202ENST00000397511 C16orf90A8MZG2 172 aa3.3□□□□□ -1.88
SSR1-202ENST00000397511 PRR34Q9NV39 138 aa3.3□□□□□ -1.88
SSR1-202ENST00000397511 STAB2Q8WWQ8 2551 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms