RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 SPRR1AP35321 89 aa14.67□□□□□ -0.06
TSPAN4-202ENST00000397396 C6orf99Q4VX62 202 aa14.67□□□□□ -0.06
TSPAN4-202ENST00000397396 LYRM7Q5U5X0 104 aa14.67□□□□□ -0.06
TSPAN4-202ENST00000397396 TRBV7-6A0A0J9YX20 115 aa14.66□□□□□ -0.06
TSPAN4-202ENST00000397396 CDK2AP2O75956 126 aa14.66□□□□□ -0.06
TSPAN4-202ENST00000397396 XGP55808 180 aa14.66□□□□□ -0.06
TSPAN4-202ENST00000397396 HAMPP81172 84 aa14.66□□□□□ -0.06
TSPAN4-202ENST00000397396 ETDCA0A1B0GVM5 59 aa14.66□□□□□ -0.06
TSPAN4-202ENST00000397396 C9orf118A6NHY6 69 aa14.66□□□□□ -0.06
TSPAN4-202ENST00000397396 TRIAP1O43715 76 aa14.64□□□□□ -0.07
TSPAN4-202ENST00000397396 H0YGX0 51 aa14.63□□□□□ -0.07
TSPAN4-202ENST00000397396 BCE1O60756 84 aa14.62□□□□□ -0.07
TSPAN4-202ENST00000397396 KRTAP11-1Q8IUC1 163 aa14.62□□□□□ -0.07
TSPAN4-202ENST00000397396 BIRC6Q9NR09 4857 aa14.61□□□□□ -0.07
TSPAN4-202ENST00000397396 H3BUT2 72 aa14.61□□□□□ -0.07
TSPAN4-202ENST00000397396 COX7BP24311 80 aa14.61□□□□□ -0.07
TSPAN4-202ENST00000397396 PSORS1C2Q9UIG4 136 aa14.61□□□□□ -0.07
TSPAN4-202ENST00000397396 KRTAP4-16G5E9R7 235 aaPredicted RBP14.6□□□□□ -0.07
TSPAN4-202ENST00000397396 SCGB1C2P0DMR2 95 aa14.6□□□□□ -0.07
TSPAN4-202ENST00000397396 ELOF1P60002 83 aaKnown RBP14.6□□□□□ -0.07
TSPAN4-202ENST00000397396 SNCGO76070 127 aa14.58□□□□□ -0.08
TSPAN4-202ENST00000397396 FAM19A1Q7Z5A9 133 aa14.58□□□□□ -0.08
TSPAN4-202ENST00000397396 H0Y9J4 135 aa14.57□□□□□ -0.08
TSPAN4-202ENST00000397396 C1orf137Q5JT78 98 aa14.57□□□□□ -0.08
TSPAN4-202ENST00000397396 Q6ZRX8 168 aa14.57□□□□□ -0.08
TSPAN4-202ENST00000397396 NAA38Q9BRA0 125 aaKnown RBP14.57□□□□□ -0.08
TSPAN4-202ENST00000397396 A0A1W2PPM0 123 aa14.56□□□□□ -0.08
TSPAN4-202ENST00000397396 B5MCH6 92 aa14.56□□□□□ -0.08
TSPAN4-202ENST00000397396 FABP2P12104 132 aa14.56□□□□□ -0.08
TSPAN4-202ENST00000397396 UBE2AP49459 152 aa14.56□□□□□ -0.08
TSPAN4-202ENST00000397396 LINC00528Q8N1L1 170 aa14.55□□□□□ -0.08
TSPAN4-202ENST00000397396 SLC25A20O43772 301 aa14.54□□□□□ -0.08
TSPAN4-202ENST00000397396 INAFM2P0DMQ5 153 aa14.54□□□□□ -0.08
TSPAN4-202ENST00000397396 DHRS4-AS1Q9P1J3 65 aa14.54□□□□□ -0.08
TSPAN4-202ENST00000397396 A0A1B0GX51 115 aa14.53□□□□□ -0.08
TSPAN4-202ENST00000397396 APOBP04114 4563 aaKnown RBP14.52□□□□□ -0.08
TSPAN4-202ENST00000397396 TRBV20-1A0A075B6N2 111 aa14.52□□□□□ -0.08
TSPAN4-202ENST00000397396 RPL37AP61513 92 aaKnown RBP14.52□□□□□ -0.08
TSPAN4-202ENST00000397396 IGLV7-43P04211 117 aa14.49□□□□□ -0.09
TSPAN4-202ENST00000397396 PRLHP81277 87 aa14.49□□□□□ -0.09
TSPAN4-202ENST00000397396 LINC00575Q6W349 94 aa14.49□□□□□ -0.09
TSPAN4-202ENST00000397396 SMR3BP02814 79 aaPredicted RBP14.48□□□□□ -0.09
TSPAN4-202ENST00000397396 ATXN8Q156A1 80 aa14.48□□□□□ -0.09
TSPAN4-202ENST00000397396 KRTAP13-1Q8IUC0 172 aa14.47□□□□□ -0.09
TSPAN4-202ENST00000397396 CLEC2BQ92478 149 aa14.47□□□□□ -0.09
TSPAN4-202ENST00000397396 hADV29S1A0JD25 119 aa14.46□□□□□ -0.09
TSPAN4-202ENST00000397396 FAM229AH3BQW9 127 aa14.46□□□□□ -0.09
TSPAN4-202ENST00000397396 LST1O00453 97 aa14.46□□□□□ -0.09
TSPAN4-202ENST00000397396 ZNF861PO60384 105 aa14.46□□□□□ -0.09
TSPAN4-202ENST00000397396 PLA2G1BP04054 148 aaKnown RBP14.44□□□□□ -0.1
TSPAN4-202ENST00000397396 HIGD2AQ9BW72 106 aa14.44□□□□□ -0.1
TSPAN4-202ENST00000397396 SPCS1Q9Y6A9 102 aa14.44□□□□□ -0.1
TSPAN4-202ENST00000397396 DNAL4O96015 105 aa14.43□□□□□ -0.1
TSPAN4-202ENST00000397396 TRACP01848 142 aa14.43□□□□□ -0.1
TSPAN4-202ENST00000397396 Q9BRP9 147 aa14.43□□□□□ -0.1
TSPAN4-202ENST00000397396 TCL1BO95988 128 aa14.42□□□□□ -0.1
TSPAN4-202ENST00000397396 SMCR5Q8TEV8 140 aa14.42□□□□□ -0.1
TSPAN4-202ENST00000397396 FAM218AQ96MZ4 157 aa14.42□□□□□ -0.1
TSPAN4-202ENST00000397396 GHRHP01286 108 aa14.41□□□□□ -0.1
TSPAN4-202ENST00000397396 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.4□□□□□ -0.1
TSPAN4-202ENST00000397396 GTF2H5Q6ZYL4 71 aa14.4□□□□□ -0.1
TSPAN4-202ENST00000397396 K7EP34 96 aa14.38□□□□□ -0.11
TSPAN4-202ENST00000397396 OCIAD2Q56VL3 154 aa14.38□□□□□ -0.11
TSPAN4-202ENST00000397396 ZNF706Q9Y5V0 76 aaPredicted RBP14.38□□□□□ -0.11
TSPAN4-202ENST00000397396 H3BQ85 93 aa14.36□□□□□ -0.11
TSPAN4-202ENST00000397396 RYR1P21817 5038 aa14.35□□□□□ -0.11
TSPAN4-202ENST00000397396 Q6ZQY7 126 aa14.35□□□□□ -0.11
TSPAN4-202ENST00000397396 Q5VSD8 79 aa14.33□□□□□ -0.12
TSPAN4-202ENST00000397396 SPINK6Q6UWN8 80 aa14.33□□□□□ -0.12
TSPAN4-202ENST00000397396 KIAA1109Q2LD37 5005 aa14.32□□□□□ -0.12
TSPAN4-202ENST00000397396 ERC2-IT1O76042 136 aa14.32□□□□□ -0.12
TSPAN4-202ENST00000397396 Q8N1X5 172 aa14.32□□□□□ -0.12
TSPAN4-202ENST00000397396 H3BMG7 143 aa14.31□□□□□ -0.12
TSPAN4-202ENST00000397396 PPDPFLQ8WWR9 84 aa14.31□□□□□ -0.12
TSPAN4-202ENST00000397396 ORMDL1Q9P0S3 153 aa14.31□□□□□ -0.12
TSPAN4-202ENST00000397396 KRTAP10-4P60372 401 aaPredicted RBP14.3□□□□□ -0.12
TSPAN4-202ENST00000397396 A0A1B0GV90 55 aa14.29□□□□□ -0.12
TSPAN4-202ENST00000397396 HSPG2P98160 4391 aa14.28□□□□□ -0.12
TSPAN4-202ENST00000397396 IGLV5-48A0A075B6I7 105 aa14.27□□□□□ -0.12
TSPAN4-202ENST00000397396 VPS13BQ7Z7G8 4022 aa14.25□□□□□ -0.13
TSPAN4-202ENST00000397396 TEX49A0A1B0GTD5 131 aa14.25□□□□□ -0.13
TSPAN4-202ENST00000397396 C9JAW5 83 aa14.25□□□□□ -0.13
TSPAN4-202ENST00000397396 TMEM256-PLSCR3K7ERE1 68 aa14.25□□□□□ -0.13
TSPAN4-202ENST00000397396 ST20-AS1Q8NBB2 130 aa14.25□□□□□ -0.13
TSPAN4-202ENST00000397396 SPRR4Q96PI1 79 aa14.25□□□□□ -0.13
TSPAN4-202ENST00000397396 HERC2O95714 4834 aa14.23□□□□□ -0.13
TSPAN4-202ENST00000397396 H3BT86 120 aa14.22□□□□□ -0.13
TSPAN4-202ENST00000397396 SPRR1BP22528 89 aa14.22□□□□□ -0.13
TSPAN4-202ENST00000397396 DEFB105AQ8NG35 78 aa14.22□□□□□ -0.13
TSPAN4-202ENST00000397396 FAT1Q14517 4588 aa14.22□□□□□ -0.13
TSPAN4-202ENST00000397396 GAGE2AQ6NT46 116 aa14.21□□□□□ -0.13
TSPAN4-202ENST00000397396 BAALC-AS2P0C853 105 aa14.2□□□□□ -0.14
TSPAN4-202ENST00000397396 LINC01547P58512 204 aaPredicted RBP14.2□□□□□ -0.14
TSPAN4-202ENST00000397396 UBE2V1Q13404 147 aa14.2□□□□□ -0.14
TSPAN4-202ENST00000397396 LINC00483Q53H64 154 aa14.19□□□□□ -0.14
TSPAN4-202ENST00000397396 Q8N377 158 aa14.18□□□□□ -0.14
TSPAN4-202ENST00000397396 F8W1H4 67 aa14.15□□□□□ -0.14
TSPAN4-202ENST00000397396 ANKRD29Q8N6D5 301 aa14.15□□□□□ -0.14
TSPAN4-202ENST00000397396 LAMTOR3Q9UHA4 124 aa14.15□□□□□ -0.14
TSPAN4-202ENST00000397396 FAM229BQ4G0N7 80 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms