RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 A0A1B0GXF2 115 aa5.3□□□□□ -1.56
NEDD9-203ENST00000397378 C9JQL5 133 aa5.3□□□□□ -1.56
NEDD9-203ENST00000397378 VPREB1P12018 145 aa5.3□□□□□ -1.56
NEDD9-203ENST00000397378 RPL23P62829 140 aaKnown RBP5.3□□□□□ -1.56
NEDD9-203ENST00000397378 HERVK_113P63121 156 aa5.3□□□□□ -1.56
NEDD9-203ENST00000397378 KRTAP19-2Q3LHN2 52 aa5.3□□□□□ -1.56
NEDD9-203ENST00000397378 BVES-AS1Q5T3Y7 98 aa5.3□□□□□ -1.56
NEDD9-203ENST00000397378 CDKN2A-AS1Q9UH64 79 aa5.3□□□□□ -1.56
NEDD9-203ENST00000397378 NDUFV3P56181 108 aaKnown RBP5.29□□□□□ -1.56
NEDD9-203ENST00000397378 PRLHP81277 87 aa5.29□□□□□ -1.56
NEDD9-203ENST00000397378 TMEM136Q6ZRR5 245 aa5.29□□□□□ -1.56
NEDD9-203ENST00000397378 PLEKHB2Q96CS7 222 aa5.29□□□□□ -1.56
NEDD9-203ENST00000397378 PRELID3AQ96N28 172 aa5.29□□□□□ -1.56
NEDD9-203ENST00000397378 IGKV2-28A0A075B6P5 120 aa5.28□□□□□ -1.56
NEDD9-203ENST00000397378 IGIPA6NJ69 53 aa5.28□□□□□ -1.56
NEDD9-203ENST00000397378 IGKV2D-28P01615 120 aa5.28□□□□□ -1.56
NEDD9-203ENST00000397378 IFITM1P13164 125 aa5.28□□□□□ -1.56
NEDD9-203ENST00000397378 MEIG1Q5JSS6 88 aa5.28□□□□□ -1.56
NEDD9-203ENST00000397378 C1orf195Q5TG92 126 aa5.28□□□□□ -1.56
NEDD9-203ENST00000397378 FAM19A1Q7Z5A9 133 aa5.28□□□□□ -1.56
NEDD9-203ENST00000397378 GNB1LQ9BYB4 327 aa5.28□□□□□ -1.56
NEDD9-203ENST00000397378 SMIM1B2RUZ4 78 aa5.27□□□□□ -1.57
NEDD9-203ENST00000397378 CD164Q04900 197 aa5.27□□□□□ -1.57
NEDD9-203ENST00000397378 PAPPA-AS1Q5QFB9 102 aa5.27□□□□□ -1.57
NEDD9-203ENST00000397378 LOC389332A0A1B0GUA5 103 aa5.26□□□□□ -1.57
NEDD9-203ENST00000397378 K7EMI3 77 aa5.26□□□□□ -1.57
NEDD9-203ENST00000397378 FABP2P12104 132 aa5.26□□□□□ -1.57
NEDD9-203ENST00000397378 SMCPP49901 116 aaPredicted RBP5.26□□□□□ -1.57
NEDD9-203ENST00000397378 C4orf26Q17RF5 130 aa5.26□□□□□ -1.57
NEDD9-203ENST00000397378 ORMDL2Q53FV1 153 aa5.26□□□□□ -1.57
NEDD9-203ENST00000397378 ATP5L2Q7Z4Y8 100 aa5.26□□□□□ -1.57
NEDD9-203ENST00000397378 Q8N8P6 123 aa5.26□□□□□ -1.57
NEDD9-203ENST00000397378 COX7B2Q8TF08 81 aa5.26□□□□□ -1.57
NEDD9-203ENST00000397378 TRAV9-1A0A075B6T8 112 aa5.25□□□□□ -1.57
NEDD9-203ENST00000397378 M0R378 163 aa5.25□□□□□ -1.57
NEDD9-203ENST00000397378 C18orf32Q8TCD1 76 aa5.25□□□□□ -1.57
NEDD9-203ENST00000397378 SPCS1Q9Y6A9 102 aa5.25□□□□□ -1.57
NEDD9-203ENST00000397378 A0A1W2PPM0 123 aa5.24□□□□□ -1.57
NEDD9-203ENST00000397378 CCDC179H3BU77 68 aa5.24□□□□□ -1.57
NEDD9-203ENST00000397378 ATP5LO75964 103 aa5.24□□□□□ -1.57
NEDD9-203ENST00000397378 SPINK1P00995 79 aa5.24□□□□□ -1.57
NEDD9-203ENST00000397378 Q6ZVH6 145 aa5.24□□□□□ -1.57
NEDD9-203ENST00000397378 SPRR4Q96PI1 79 aa5.24□□□□□ -1.57
NEDD9-203ENST00000397378 TIMM17AQ99595 171 aa5.24□□□□□ -1.57
NEDD9-203ENST00000397378 IGLV5-45A0A087WSX0 123 aa5.23□□□□□ -1.57
NEDD9-203ENST00000397378 NDUFC2O95298 119 aa5.23□□□□□ -1.57
NEDD9-203ENST00000397378 XP32Q5T750 250 aa5.23□□□□□ -1.57
NEDD9-203ENST00000397378 SLC25A34Q6PIV7 304 aa5.23□□□□□ -1.57
NEDD9-203ENST00000397378 DAND5Q8N907 189 aa5.23□□□□□ -1.57
NEDD9-203ENST00000397378 Q8NBF4 154 aa5.23□□□□□ -1.57
NEDD9-203ENST00000397378 HIGD2AQ9BW72 106 aa5.23□□□□□ -1.57
NEDD9-203ENST00000397378 NDUFA12Q9UI09 145 aa5.22□□□□□ -1.57
NEDD9-203ENST00000397378 ZNF706Q9Y5V0 76 aaPredicted RBP5.22□□□□□ -1.57
NEDD9-203ENST00000397378 MACF1Q9UPN3 7388 aaKnown RBP5.21□□□□□ -1.58
NEDD9-203ENST00000397378 DPM2O94777 84 aa5.21□□□□□ -1.58
NEDD9-203ENST00000397378 RPS29P62273 56 aaKnown RBP5.21□□□□□ -1.58
NEDD9-203ENST00000397378 FAM19A2Q8N3H0 131 aa5.21□□□□□ -1.58
NEDD9-203ENST00000397378 RAB37Q96AX2 223 aa5.21□□□□□ -1.58
NEDD9-203ENST00000397378 TOMM6Q96B49 74 aa5.21□□□□□ -1.58
NEDD9-203ENST00000397378 NXT2Q9NPJ8 142 aaKnown RBP5.21□□□□□ -1.58
NEDD9-203ENST00000397378 LAMTOR3Q9UHA4 124 aa5.21□□□□□ -1.58
NEDD9-203ENST00000397378 H3BMG7 143 aa5.2□□□□□ -1.58
NEDD9-203ENST00000397378 MT-ATP8P03928 68 aa5.2□□□□□ -1.58
NEDD9-203ENST00000397378 ATOH7Q8N100 152 aa5.2□□□□□ -1.58
NEDD9-203ENST00000397378 SND1-IT1Q9HBX3 110 aa5.2□□□□□ -1.58
NEDD9-203ENST00000397378 SSPOA2VEC9 5147 aa5.2□□□□□ -1.58
NEDD9-203ENST00000397378 SYNE2Q8WXH0 6885 aaKnown RBP5.19□□□□□ -1.58
NEDD9-203ENST00000397378 UQCRQO14949 82 aa5.19□□□□□ -1.58
NEDD9-203ENST00000397378 PFN2P35080 140 aa5.19□□□□□ -1.58
NEDD9-203ENST00000397378 TMEM258P61165 79 aa5.19□□□□□ -1.58
NEDD9-203ENST00000397378 KIAA1644Q3SXP7 199 aa5.19□□□□□ -1.58
NEDD9-203ENST00000397378 Q8N377 158 aa5.19□□□□□ -1.58
NEDD9-203ENST00000397378 IGLV8-61A0A075B6I0 122 aa5.18□□□□□ -1.58
NEDD9-203ENST00000397378 SNCGO76070 127 aa5.18□□□□□ -1.58
NEDD9-203ENST00000397378 COX17Q14061 63 aa5.18□□□□□ -1.58
NEDD9-203ENST00000397378 Q8NDZ9 215 aa5.18□□□□□ -1.58
NEDD9-203ENST00000397378 MRPL18Q9H0U6 180 aaKnown RBP5.18□□□□□ -1.58
NEDD9-203ENST00000397378 FCGBPQ9Y6R7 5405 aaPredicted RBP5.18□□□□□ -1.58
NEDD9-203ENST00000397378 USH2AO75445 5202 aa5.17□□□□□ -1.58
NEDD9-203ENST00000397378 SYS1-DBNDD2H3BUS1 97 aa5.17□□□□□ -1.58
NEDD9-203ENST00000397378 SLC25A20O43772 301 aa5.17□□□□□ -1.58
NEDD9-203ENST00000397378 PPDPFLQ8WWR9 84 aa5.17□□□□□ -1.58
NEDD9-203ENST00000397378 SCGB3A1Q96QR1 104 aa5.17□□□□□ -1.58
NEDD9-203ENST00000397378 IMUPQ9GZP8 106 aa5.17□□□□□ -1.58
NEDD9-203ENST00000397378 TRAPPC1Q9Y5R8 145 aa5.17□□□□□ -1.58
NEDD9-203ENST00000397378 IGLV5-39A0A0G2JS06 123 aa5.16□□□□□ -1.58
NEDD9-203ENST00000397378 LINC01549A6NIU2 74 aa5.16□□□□□ -1.58
NEDD9-203ENST00000397378 KRTAP4-16G5E9R7 235 aaPredicted RBP5.16□□□□□ -1.58
NEDD9-203ENST00000397378 H3BUT2 72 aa5.16□□□□□ -1.58
NEDD9-203ENST00000397378 KRTDAPP60985 99 aa5.16□□□□□ -1.58
NEDD9-203ENST00000397378 LINC00483Q53H64 154 aa5.16□□□□□ -1.58
NEDD9-203ENST00000397378 LOC100996750A0A140TA64 210 aa5.15□□□□□ -1.59
NEDD9-203ENST00000397378 Q5XG85 94 aa5.15□□□□□ -1.59
NEDD9-203ENST00000397378 COX6B2Q6YFQ2 88 aa5.15□□□□□ -1.59
NEDD9-203ENST00000397378 SSBP3-AS1Q7Z2R9 100 aa5.15□□□□□ -1.59
NEDD9-203ENST00000397378 KRTAP19-1Q8IUB9 90 aa5.15□□□□□ -1.59
NEDD9-203ENST00000397378 NAA38Q9BRA0 125 aaKnown RBP5.15□□□□□ -1.59
NEDD9-203ENST00000397378 KRTAP4-6Q9BYQ5 205 aa5.15□□□□□ -1.59
NEDD9-203ENST00000397378 PRYO14603 147 aa5.14□□□□□ -1.59
NEDD9-203ENST00000397378 SPRR1AP35321 89 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms