RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 NCR3O14931 201 aa10.06□□□□□ -0.8
CXCL1-201ENST00000395761 FXYD2P54710 66 aa10.06□□□□□ -0.8
CXCL1-201ENST00000395761 TRAV13-2A0A0B4J235 113 aa10.04□□□□□ -0.8
CXCL1-201ENST00000395761 BCE1O60756 84 aa10.04□□□□□ -0.8
CXCL1-201ENST00000395761 IGLV6-57P01721 117 aa10.04□□□□□ -0.8
CXCL1-201ENST00000395761 CFC1BP0CG36 223 aa10.04□□□□□ -0.8
CXCL1-201ENST00000395761 CFC1P0CG37 223 aa10.04□□□□□ -0.8
CXCL1-201ENST00000395761 BVES-AS1Q5T3Y7 98 aa10.04□□□□□ -0.8
CXCL1-201ENST00000395761 LINC00337Q8N6G1 96 aa10.04□□□□□ -0.8
CXCL1-201ENST00000395761 ZNF861PO60384 105 aa10.03□□□□□ -0.8
CXCL1-201ENST00000395761 REG3GQ6UW15 175 aa10.03□□□□□ -0.8
CXCL1-201ENST00000395761 DIRC1Q969H9 104 aa10.03□□□□□ -0.8
CXCL1-201ENST00000395761 TMEM126AQ9H061 195 aa10.03□□□□□ -0.8
CXCL1-201ENST00000395761 A0A0B4J2C4 111 aa10.02□□□□□ -0.81
CXCL1-201ENST00000395761 M0R143 59 aa10.02□□□□□ -0.81
CXCL1-201ENST00000395761 MT1HL1P0DM35 61 aa10.02□□□□□ -0.81
CXCL1-201ENST00000395761 S100A7L2Q5SY68 101 aa10.02□□□□□ -0.81
CXCL1-201ENST00000395761 HERC1Q15751 4861 aa10.02□□□□□ -0.81
CXCL1-201ENST00000395761 TRBV10-3A0A0K0K1G6 114 aa10.01□□□□□ -0.81
CXCL1-201ENST00000395761 A0A1B0GWB2 263 aa10.01□□□□□ -0.81
CXCL1-201ENST00000395761 H0Y9J4 135 aa10.01□□□□□ -0.81
CXCL1-201ENST00000395761 LINC01600Q96MT4 127 aa10.01□□□□□ -0.81
CXCL1-201ENST00000395761 KCNQ1DNQ9H478 68 aa10.01□□□□□ -0.81
CXCL1-201ENST00000395761 CBY1Q9Y3M2 126 aa10.01□□□□□ -0.81
CXCL1-201ENST00000395761 HINT1P49773 126 aaPredicted RBP10□□□□□ -0.81
CXCL1-201ENST00000395761 OR13C6PQ8NH95 151 aa10□□□□□ -0.81
CXCL1-201ENST00000395761 A6NDN8 102 aa9.99□□□□□ -0.81
CXCL1-201ENST00000395761 RPL28P46779 137 aaKnown RBP9.98□□□□□ -0.81
CXCL1-201ENST00000395761 KRTAP13-1Q8IUC0 172 aa9.98□□□□□ -0.81
CXCL1-201ENST00000395761 RAB37Q96AX2 223 aa9.98□□□□□ -0.81
CXCL1-201ENST00000395761 PRYO14603 147 aa9.97□□□□□ -0.81
CXCL1-201ENST00000395761 UBE2AP49459 152 aa9.97□□□□□ -0.81
CXCL1-201ENST00000395761 NHP2Q9NX24 153 aaKnown RBP9.97□□□□□ -0.81
CXCL1-201ENST00000395761 SPRR1AP35321 89 aa9.96□□□□□ -0.82
CXCL1-201ENST00000395761 PRLHP81277 87 aa9.96□□□□□ -0.82
CXCL1-201ENST00000395761 FAM19A1Q7Z5A9 133 aa9.96□□□□□ -0.82
CXCL1-201ENST00000395761 PRO1854Q9UHT4 67 aa9.96□□□□□ -0.82
CXCL1-201ENST00000395761 TRAV23DV6A0A075B6W5 121 aa9.95□□□□□ -0.82
CXCL1-201ENST00000395761 KRTAP1-4P0C5Y4 121 aa9.95□□□□□ -0.82
CXCL1-201ENST00000395761 KRTAP10-8P60410 259 aa9.95□□□□□ -0.82
CXCL1-201ENST00000395761 TNXBP22105 4242 aa9.95□□□□□ -0.82
CXCL1-201ENST00000395761 RPL13AP40429 203 aaKnown RBP9.94□□□□□ -0.82
CXCL1-201ENST00000395761 PCP4L1A6NKN8 68 aa9.93□□□□□ -0.82
CXCL1-201ENST00000395761 SMIM11BQ8TCY0 68 aa9.93□□□□□ -0.82
CXCL1-201ENST00000395761 KRTAP4-16G5E9R7 235 aaPredicted RBP9.92□□□□□ -0.82
CXCL1-201ENST00000395761 ZNF73O43830 326 aaPredicted RBP9.92□□□□□ -0.82
CXCL1-201ENST00000395761 PRR26Q8N8Z3 221 aa9.91□□□□□ -0.82
CXCL1-201ENST00000395761 TRBV7-6A0A0J9YX20 115 aa9.9□□□□□ -0.82
CXCL1-201ENST00000395761 K7ERJ3 54 aa9.9□□□□□ -0.82
CXCL1-201ENST00000395761 SNHG12Q9BXW3 62 aa9.89□□□□□ -0.83
CXCL1-201ENST00000395761 BATFQ16520 125 aa9.88□□□□□ -0.83
CXCL1-201ENST00000395761 C6orf99Q4VX62 202 aa9.88□□□□□ -0.83
CXCL1-201ENST00000395761 ETDCA0A1B0GVM5 59 aa9.87□□□□□ -0.83
CXCL1-201ENST00000395761 H7C2G1 150 aa9.87□□□□□ -0.83
CXCL1-201ENST00000395761 ANAPC11Q9NYG5 84 aa9.87□□□□□ -0.83
CXCL1-201ENST00000395761 B5MCH6 92 aa9.86□□□□□ -0.83
CXCL1-201ENST00000395761 HIGD2AQ9BW72 106 aa9.86□□□□□ -0.83
CXCL1-201ENST00000395761 TSPAN13O95857 204 aa9.85□□□□□ -0.83
CXCL1-201ENST00000395761 COX7BP24311 80 aa9.84□□□□□ -0.83
CXCL1-201ENST00000395761 ELOF1P60002 83 aaKnown RBP9.84□□□□□ -0.83
CXCL1-201ENST00000395761 VAMP3Q15836 100 aa9.84□□□□□ -0.83
CXCL1-201ENST00000395761 Q1RN00 199 aa9.84□□□□□ -0.83
CXCL1-201ENST00000395761 Q6ZRX8 168 aa9.84□□□□□ -0.83
CXCL1-201ENST00000395761 A0A087X002 238 aa9.82□□□□□ -0.84
CXCL1-201ENST00000395761 SMCR5Q8TEV8 140 aa9.82□□□□□ -0.84
CXCL1-201ENST00000395761 H0YGX0 51 aa9.81□□□□□ -0.84
CXCL1-201ENST00000395761 TRIAP1O43715 76 aa9.81□□□□□ -0.84
CXCL1-201ENST00000395761 COL5A1-AS1Q5SY13 56 aa9.81□□□□□ -0.84
CXCL1-201ENST00000395761 TAX1BP3O14907 124 aa9.8□□□□□ -0.84
CXCL1-201ENST00000395761 ERC2-IT1O76042 136 aa9.79□□□□□ -0.84
CXCL1-201ENST00000395761 COX6CP09669 75 aa9.79□□□□□ -0.84
CXCL1-201ENST00000395761 PSMB2P49721 201 aa9.79□□□□□ -0.84
CXCL1-201ENST00000395761 Q9BRP9 147 aa9.79□□□□□ -0.84
CXCL1-201ENST00000395761 DHRS4-AS1Q9P1J3 65 aa9.79□□□□□ -0.84
CXCL1-201ENST00000395761 CRYGAP11844 174 aa9.78□□□□□ -0.84
CXCL1-201ENST00000395761 LINC00575Q6W349 94 aa9.78□□□□□ -0.84
CXCL1-201ENST00000395761 SPRR4Q96PI1 79 aa9.78□□□□□ -0.84
CXCL1-201ENST00000395761 C9orf118A6NHY6 69 aa9.77□□□□□ -0.85
CXCL1-201ENST00000395761 KRTAP13-2Q52LG2 175 aa9.77□□□□□ -0.85
CXCL1-201ENST00000395761 LCE2BO14633 110 aa9.76□□□□□ -0.85
CXCL1-201ENST00000395761 FAM229BQ4G0N7 80 aa9.76□□□□□ -0.85
CXCL1-201ENST00000395761 A0A1B0GX51 115 aa9.74□□□□□ -0.85
CXCL1-201ENST00000395761 SLC25A20O43772 301 aa9.74□□□□□ -0.85
CXCL1-201ENST00000395761 SCGB1C2P0DMR2 95 aa9.74□□□□□ -0.85
CXCL1-201ENST00000395761 ZNF706Q9Y5V0 76 aaPredicted RBP9.74□□□□□ -0.85
CXCL1-201ENST00000395761 HMCN2Q8NDA2 5059 aa9.74□□□□□ -0.85
CXCL1-201ENST00000395761 hADV29S1A0JD25 119 aa9.73□□□□□ -0.85
CXCL1-201ENST00000395761 H3BUT2 72 aa9.73□□□□□ -0.85
CXCL1-201ENST00000395761 TYMSOSQ8TAI1 123 aa9.73□□□□□ -0.85
CXCL1-201ENST00000395761 NAA38Q9BRA0 125 aaKnown RBP9.73□□□□□ -0.85
CXCL1-201ENST00000395761 FAM218AQ96MZ4 157 aa9.72□□□□□ -0.85
CXCL1-201ENST00000395761 SNCGO76070 127 aa9.71□□□□□ -0.86
CXCL1-201ENST00000395761 GAGE2AQ6NT46 116 aa9.71□□□□□ -0.86
CXCL1-201ENST00000395761 C3orf22Q8N5N4 141 aa9.71□□□□□ -0.86
CXCL1-201ENST00000395761 LYRM7Q5U5X0 104 aa9.7□□□□□ -0.86
CXCL1-201ENST00000395761 CLEC2BQ92478 149 aa9.7□□□□□ -0.86
CXCL1-201ENST00000395761 A0A1W2PPM0 123 aa9.69□□□□□ -0.86
CXCL1-201ENST00000395761 LINC00483Q53H64 154 aa9.69□□□□□ -0.86
CXCL1-201ENST00000395761 ST20-AS1Q8NBB2 130 aa9.69□□□□□ -0.86
CXCL1-201ENST00000395761 LST1O00453 97 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms