RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 IGLV7-46A0A075B6I9 117 aa2.66□□□□□ -1.98
UBR3-202ENST00000392632 CDC42SE1Q9NRR8 79 aa2.66□□□□□ -1.98
UBR3-202ENST00000392632 ANKRD17O75179 2603 aaKnown RBP2.66□□□□□ -1.98
UBR3-202ENST00000392632 COL5A1P20908 1838 aaPredicted RBP2.66□□□□□ -1.98
UBR3-202ENST00000392632 PRR15Q8IV56 129 aa2.66□□□□□ -1.98
UBR3-202ENST00000392632 IGLV5-48A0A075B6I7 105 aa2.65□□□□□ -1.98
UBR3-202ENST00000392632 PLA2G2DQ9UNK4 145 aa2.65□□□□□ -1.98
UBR3-202ENST00000392632 C9orf92A6NGG3 77 aa2.65□□□□□ -1.98
UBR3-202ENST00000392632 TLX1NBP0CAT3 122 aa2.65□□□□□ -1.98
UBR3-202ENST00000392632 ZNF575Q86XF7 245 aa2.65□□□□□ -1.98
UBR3-202ENST00000392632 DSCR10P59022 87 aa2.65□□□□□ -1.99
UBR3-202ENST00000392632 MIR22HGQ0VDD5 57 aa2.65□□□□□ -1.99
UBR3-202ENST00000392632 SEC61BP60468 96 aaKnown RBP2.65□□□□□ -1.99
UBR3-202ENST00000392632 RPS28P62857 69 aaKnown RBP2.64□□□□□ -1.99
UBR3-202ENST00000392632 CD164Q04900 197 aa2.64□□□□□ -1.99
UBR3-202ENST00000392632 URB1-AS1Q96HZ7 61 aa2.64□□□□□ -1.99
UBR3-202ENST00000392632 RAI1Q7Z5J4 1906 aaPredicted RBP2.64□□□□□ -1.99
UBR3-202ENST00000392632 COA5Q86WW8 74 aa2.64□□□□□ -1.99
UBR3-202ENST00000392632 A0A096LNJ9 63 aa2.63□□□□□ -1.99
UBR3-202ENST00000392632 K7EQZ3 153 aa2.63□□□□□ -1.99
UBR3-202ENST00000392632 C15orf56Q8N910 161 aa2.63□□□□□ -1.99
UBR3-202ENST00000392632 PRR34Q9NV39 138 aa2.63□□□□□ -1.99
UBR3-202ENST00000392632 LINC01546A6NGU7 62 aa2.63□□□□□ -1.99
UBR3-202ENST00000392632 A8MUN3 132 aa2.63□□□□□ -1.99
UBR3-202ENST00000392632 CNBPP62633 177 aaKnown RBP2.63□□□□□ -1.99
UBR3-202ENST00000392632 CSAG1Q6PB30 78 aa2.63□□□□□ -1.99
UBR3-202ENST00000392632 FAM104AQ969W3 186 aa2.63□□□□□ -1.99
UBR3-202ENST00000392632 KIAA1549LQ6ZVL6 1849 aa2.63□□□□□ -1.99
UBR3-202ENST00000392632 IGFL1Q6UW32 110 aa2.62□□□□□ -1.99
UBR3-202ENST00000392632 CSNK1G2-AS1Q8NCQ2 148 aa2.62□□□□□ -1.99
UBR3-202ENST00000392632 COL4A3Q01955 1670 aa2.62□□□□□ -1.99
UBR3-202ENST00000392632 EML5Q05BV3 1969 aa2.62□□□□□ -1.99
UBR3-202ENST00000392632 KLK9Q2XQG4 91 aa2.62□□□□□ -1.99
UBR3-202ENST00000392632 FAM229BQ4G0N7 80 aa2.62□□□□□ -1.99
UBR3-202ENST00000392632 SPRR4Q96PI1 79 aa2.62□□□□□ -1.99
UBR3-202ENST00000392632 CEP192Q8TEP8 1941 aa2.62□□□□□ -1.99
UBR3-202ENST00000392632 WIPF1O43516 503 aa2.61□□□□□ -1.99
UBR3-202ENST00000392632 SETXQ7Z333 2677 aaKnown RBP2.61□□□□□ -1.99
UBR3-202ENST00000392632 KRTAP3-3Q9BYR6 98 aa2.61□□□□□ -1.99
UBR3-202ENST00000392632 KRTAP3-2Q9BYR7 98 aa2.61□□□□□ -1.99
UBR3-202ENST00000392632 DMBT1Q9UGM3 2413 aaPredicted RBP2.61□□□□□ -1.99
UBR3-202ENST00000392632 LRP4O75096 1905 aa2.61□□□□□ -1.99
UBR3-202ENST00000392632 LINC00310P59036 64 aa2.6□□□□□ -1.99
UBR3-202ENST00000392632 KRTAP10-11P60412 298 aa2.6□□□□□ -1.99
UBR3-202ENST00000392632 FAM168BA1KXE4 195 aa2.59□□□□□ -1.99
UBR3-202ENST00000392632 LINC00612Q8N6U2 182 aa2.59□□□□□ -1.99
UBR3-202ENST00000392632 FAM218AQ96MZ4 157 aa2.59□□□□□ -1.99
UBR3-202ENST00000392632 MUC22E2RYF6 1773 aaPredicted RBP2.59□□□□□ -1.99
UBR3-202ENST00000392632 A0A0D9SG42 100 aa2.59□□□□□ -2
UBR3-202ENST00000392632 Q1T7F1 81 aa2.59□□□□□ -2
UBR3-202ENST00000392632 SPANXA2-OT1Q8N9U9 137 aa2.58□□□□□ -2
UBR3-202ENST00000392632 OXTP01178 125 aa2.58□□□□□ -2
UBR3-202ENST00000392632 PLAC4Q8WY50 150 aa2.58□□□□□ -2
UBR3-202ENST00000392632 CASC10Q5T4H9 136 aa2.57□□□□□ -2
UBR3-202ENST00000392632 Q8N377 158 aa2.57□□□□□ -2
UBR3-202ENST00000392632 TNP2Q05952 138 aa2.57□□□□□ -2
UBR3-202ENST00000392632 PCSK5Q92824 1860 aa2.57□□□□□ -2
UBR3-202ENST00000392632 H7BZZ5 65 aa2.56□□□□□ -2
UBR3-202ENST00000392632 Q8N1X5 172 aa2.56□□□□□ -2
UBR3-202ENST00000392632 SRCAPQ6ZRS2 3230 aa2.56□□□□□ -2
UBR3-202ENST00000392632 R4GN34 69 aa2.56□□□□□ -2
UBR3-202ENST00000392632 HELZ2Q9BYK8 2649 aaKnown RBP2.56□□□□□ -2
UBR3-202ENST00000392632 A0A0A0MQY5 61 aa2.55□□□□□ -2
UBR3-202ENST00000392632 A0A1B0GU33 70 aa2.55□□□□□ -2
UBR3-202ENST00000392632 GOLGB1Q14789 3259 aaKnown RBP2.55□□□□□ -2
UBR3-202ENST00000392632 A0A1W2PNN7 141 aa2.55□□□□□ -2
UBR3-202ENST00000392632 KLKP1Q107X0 134 aa2.55□□□□□ -2
UBR3-202ENST00000392632 PRR26Q8N8Z3 221 aa2.55□□□□□ -2
UBR3-202ENST00000392632 KTN1-AS1Q86SY8 53 aa2.55□□□□□ -2
UBR3-202ENST00000392632 DMAC1Q96GE9 116 aa2.55□□□□□ -2
UBR3-202ENST00000392632 STAB2Q8WWQ8 2551 aa2.55□□□□□ -2
UBR3-202ENST00000392632 LCA10Q71F78 164 aa2.55□□□□□ -2
UBR3-202ENST00000392632 NOTCH1P46531 2555 aa2.55□□□□□ -2
UBR3-202ENST00000392632 ANAPC11Q9NYG5 84 aa2.54□□□□□ -2
UBR3-202ENST00000392632 LCE6AA0A183 80 aa2.54□□□□□ -2
UBR3-202ENST00000392632 FP248Q71RG6 208 aaPredicted RBP2.54□□□□□ -2
UBR3-202ENST00000392632 ZCCHC13Q8WW36 166 aaKnown RBP2.54□□□□□ -2
UBR3-202ENST00000392632 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.54□□□□□ -2
UBR3-202ENST00000392632 S4R3F8 94 aa2.54□□□□□ -2
UBR3-202ENST00000392632 A0A096LNT2 108 aa2.53□□□□□ -2
UBR3-202ENST00000392632 UTRNP46939 3433 aa2.53□□□□□ -2
UBR3-202ENST00000392632 BAHCC1Q9P281 2608 aa2.53□□□□□ -2
UBR3-202ENST00000392632 LITAFQ99732 161 aa2.53□□□□□ -2.01
UBR3-202ENST00000392632 PLAC8Q9NZF1 115 aa2.53□□□□□ -2.01
UBR3-202ENST00000392632 SMCPP49901 116 aaPredicted RBP2.52□□□□□ -2.01
UBR3-202ENST00000392632 EP400Q96L91 3159 aa2.52□□□□□ -2.01
UBR3-202ENST00000392632 PRO0461Q9UI25 63 aa2.52□□□□□ -2.01
UBR3-202ENST00000392632 A0A1W2PNM2 257 aa2.52□□□□□ -2.01
UBR3-202ENST00000392632 GIG44P09565 113 aaPredicted RBP2.51□□□□□ -2.01
UBR3-202ENST00000392632 Q5VSD8 79 aa2.51□□□□□ -2.01
UBR3-202ENST00000392632 C4orf26Q17RF5 130 aa2.51□□□□□ -2.01
UBR3-202ENST00000392632 PTPRBP23467 1997 aa2.5□□□□□ -2.01
UBR3-202ENST00000392632 TEP1Q99973 2627 aaKnown RBP2.5□□□□□ -2.01
UBR3-202ENST00000392632 KRTAP10-3P60369 221 aa2.5□□□□□ -2.01
UBR3-202ENST00000392632 SPINK7P58062 85 aa2.49□□□□□ -2.01
UBR3-202ENST00000392632 ITPR3Q14573 2671 aa2.49□□□□□ -2.01
UBR3-202ENST00000392632 BPTFQ12830 3046 aa2.49□□□□□ -2.01
UBR3-202ENST00000392632 CFAP46Q8IYW2 2715 aa2.49□□□□□ -2.01
UBR3-202ENST00000392632 NBEAL1Q6ZS30 2694 aa2.48□□□□□ -2.01
UBR3-202ENST00000392632 KRTAP1-1Q07627 177 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms