RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 ALKAL2Q6UX46 152 aa-1.27□□□□□ -2.61
SNORD28B-201ENST00000390993 CACFD1Q9UGQ2 172 aa-1.27□□□□□ -2.61
SNORD28B-201ENST00000390993 UBE2D4Q9Y2X8 147 aa-1.27□□□□□ -2.61
SNORD28B-201ENST00000390993 IER3IP1Q9Y5U9 82 aa-1.27□□□□□ -2.61
SNORD28B-201ENST00000390993 RGPD8O14715 1765 aaPredicted RBP-1.27□□□□□ -2.61
SNORD28B-201ENST00000390993 RGPD5Q99666 1765 aa-1.27□□□□□ -2.61
SNORD28B-201ENST00000390993 UBR3Q6ZT12 1888 aa-1.27□□□□□ -2.61
SNORD28B-201ENST00000390993 ARHGAP5Q13017 1502 aa-1.28□□□□□ -2.61
SNORD28B-201ENST00000390993 MPC2O95563 127 aa-1.28□□□□□ -2.61
SNORD28B-201ENST00000390993 UQCRHP07919 91 aa-1.28□□□□□ -2.61
SNORD28B-201ENST00000390993 C3orf79P0CE67 100 aa-1.28□□□□□ -2.61
SNORD28B-201ENST00000390993 ASIPP42127 132 aa-1.28□□□□□ -2.61
SNORD28B-201ENST00000390993 HMGN3Q15651 99 aa-1.28□□□□□ -2.61
SNORD28B-201ENST00000390993 MON2Q7Z3U7 1717 aa-1.29□□□□□ -2.62
SNORD28B-201ENST00000390993 PREX1Q8TCU6 1659 aa-1.29□□□□□ -2.62
SNORD28B-201ENST00000390993 FAM135AQ9P2D6 1515 aa-1.29□□□□□ -2.62
SNORD28B-201ENST00000390993 MYOM2P54296 1465 aa-1.29□□□□□ -2.62
SNORD28B-201ENST00000390993 IGLC2P0DOY2 106 aa-1.29□□□□□ -2.62
SNORD28B-201ENST00000390993 IGLC3P0DOY3 106 aa-1.29□□□□□ -2.62
SNORD28B-201ENST00000390993 COX7BP24311 80 aa-1.29□□□□□ -2.62
SNORD28B-201ENST00000390993 DYNC1H1Q14204 4646 aaKnown RBP-1.29□□□□□ -2.62
SNORD28B-201ENST00000390993 FOCADQ5VW36 1801 aa-1.29□□□□□ -2.62
SNORD28B-201ENST00000390993 C5P01031 1676 aa-1.29□□□□□ -2.62
SNORD28B-201ENST00000390993 LRRC9Q6ZRR7 1453 aa-1.3□□□□□ -2.62
SNORD28B-201ENST00000390993 RANBP2P49792 3224 aaKnown RBP-1.3□□□□□ -2.62
SNORD28B-201ENST00000390993 D6R8Y8 96 aa-1.3□□□□□ -2.62
SNORD28B-201ENST00000390993 GNG4P50150 75 aa-1.3□□□□□ -2.62
SNORD28B-201ENST00000390993 MUSTN1Q8IVN3 82 aa-1.3□□□□□ -2.62
SNORD28B-201ENST00000390993 PRO3102Q9H379 93 aa-1.3□□□□□ -2.62
SNORD28B-201ENST00000390993 MAGI2Q86UL8 1455 aa-1.31□□□□□ -2.62
SNORD28B-201ENST00000390993 C4AP0C0L4 1744 aa-1.31□□□□□ -2.62
SNORD28B-201ENST00000390993 C4BP0C0L5 1744 aa-1.31□□□□□ -2.62
SNORD28B-201ENST00000390993 TOPAZ1Q8N9V7 1692 aa-1.31□□□□□ -2.62
SNORD28B-201ENST00000390993 hADV29S1A0JD25 119 aa-1.31□□□□□ -2.62
SNORD28B-201ENST00000390993 PPP3R1P63098 170 aa-1.31□□□□□ -2.62
SNORD28B-201ENST00000390993 COL12A1Q99715 3063 aa-1.31□□□□□ -2.62
SNORD28B-201ENST00000390993 NDUFA2O43678 99 aa-1.32□□□□□ -2.62
SNORD28B-201ENST00000390993 LEPROTL1O95214 131 aa-1.32□□□□□ -2.62
SNORD28B-201ENST00000390993 LINC00158P58513 81 aa-1.32□□□□□ -2.62
SNORD28B-201ENST00000390993 ZNF720Q7Z2F6 126 aa-1.32□□□□□ -2.62
SNORD28B-201ENST00000390993 TRGV9Q99603 122 aa-1.32□□□□□ -2.62
SNORD28B-201ENST00000390993 MLH3Q9UHC1 1453 aa-1.32□□□□□ -2.62
SNORD28B-201ENST00000390993 RAPGEF2Q9Y4G8 1499 aa-1.32□□□□□ -2.62
SNORD28B-201ENST00000390993 NRKQ7Z2Y5 1582 aa-1.33□□□□□ -2.62
SNORD28B-201ENST00000390993 SRCAPQ6ZRS2 3230 aa-1.33□□□□□ -2.62
SNORD28B-201ENST00000390993 LOC105371267A0A1B0GV96 52 aa-1.33□□□□□ -2.62
SNORD28B-201ENST00000390993 MT1XP80297 61 aa-1.33□□□□□ -2.62
SNORD28B-201ENST00000390993 KRTAP19-5Q3LI72 72 aa-1.33□□□□□ -2.62
SNORD28B-201ENST00000390993 ETDBQ3ZM63 59 aa-1.33□□□□□ -2.62
SNORD28B-201ENST00000390993 SERP2Q8N6R1 65 aa-1.33□□□□□ -2.62
SNORD28B-201ENST00000390993 QSER1Q2KHR3 1735 aa-1.33□□□□□ -2.62
SNORD28B-201ENST00000390993 CUL7Q14999 1698 aa-1.33□□□□□ -2.62
SNORD28B-201ENST00000390993 ROCK2O75116 1388 aaKnown RBP-1.34□□□□□ -2.62
SNORD28B-201ENST00000390993 C5orf42Q9H799 3197 aa-1.34□□□□□ -2.62
SNORD28B-201ENST00000390993 GTF2H5Q6ZYL4 71 aa-1.35□□□□□ -2.63
SNORD28B-201ENST00000390993 GAFA1Q96PS6 74 aa-1.35□□□□□ -2.63
SNORD28B-201ENST00000390993 BPTFQ12830 3046 aa-1.35□□□□□ -2.63
SNORD28B-201ENST00000390993 ANKRD36BQ8N2N9 1353 aa-1.35□□□□□ -2.63
SNORD28B-201ENST00000390993 CHD7Q9P2D1 2997 aa-1.35□□□□□ -2.63
SNORD28B-201ENST00000390993 CELSR3Q9NYQ7 3312 aa-1.36□□□□□ -2.63
SNORD28B-201ENST00000390993 GNGT2O14610 69 aa-1.36□□□□□ -2.63
SNORD28B-201ENST00000390993 PLXNC1O60486 1568 aa-1.36□□□□□ -2.63
SNORD28B-201ENST00000390993 MT1HL1P0DM35 61 aa-1.36□□□□□ -2.63
SNORD28B-201ENST00000390993 PKD1L3Q7Z443 1732 aa-1.36□□□□□ -2.63
SNORD28B-201ENST00000390993 FAM107BQ9H098 131 aa-1.36□□□□□ -2.63
SNORD28B-201ENST00000390993 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.36□□□□□ -2.63
SNORD28B-201ENST00000390993 CHD1O14646 1710 aa-1.37□□□□□ -2.63
SNORD28B-201ENST00000390993 SPHKAPQ2M3C7 1700 aa-1.37□□□□□ -2.63
SNORD28B-201ENST00000390993 S100A1P23297 94 aa-1.37□□□□□ -2.63
SNORD28B-201ENST00000390993 CLPSL2Q6UWE3 100 aa-1.37□□□□□ -2.63
SNORD28B-201ENST00000390993 TLN2Q9Y4G6 2542 aa-1.37□□□□□ -2.63
SNORD28B-201ENST00000390993 SPTBN5Q9NRC6 3674 aaKnown RBP-1.37□□□□□ -2.63
SNORD28B-201ENST00000390993 MAGI3Q5TCQ9 1506 aa-1.38□□□□□ -2.63
SNORD28B-201ENST00000390993 UQCRHLA0A096LP55 91 aa-1.38□□□□□ -2.63
SNORD28B-201ENST00000390993 A0A1B0GUT8 65 aa-1.38□□□□□ -2.63
SNORD28B-201ENST00000390993 F8WEM9 126 aa-1.38□□□□□ -2.63
SNORD28B-201ENST00000390993 CORTO00230 105 aa-1.38□□□□□ -2.63
SNORD28B-201ENST00000390993 ATOX1O00244 68 aa-1.38□□□□□ -2.63
SNORD28B-201ENST00000390993 CYB5AP00167 134 aa-1.38□□□□□ -2.63
SNORD28B-201ENST00000390993 MRPS10P82664 201 aaKnown RBP-1.38□□□□□ -2.63
SNORD28B-201ENST00000390993 SARNPP82979 210 aaKnown RBP-1.38□□□□□ -2.63
SNORD28B-201ENST00000390993 DEFB106AQ8N104 65 aa-1.38□□□□□ -2.63
SNORD28B-201ENST00000390993 CRYBG1Q9Y4K1 1723 aa-1.38□□□□□ -2.63
SNORD28B-201ENST00000390993 ITPR1Q14643 2758 aa-1.39□□□□□ -2.63
SNORD28B-201ENST00000390993 LRRC7Q96NW7 1537 aa-1.39□□□□□ -2.63
SNORD28B-201ENST00000390993 LRBAP50851 2863 aa-1.39□□□□□ -2.63
SNORD28B-201ENST00000390993 CC2D2AQ9P2K1 1620 aa-1.39□□□□□ -2.63
SNORD28B-201ENST00000390993 NALCNQ8IZF0 1738 aa-1.39□□□□□ -2.63
SNORD28B-201ENST00000390993 IQCF6A8MYZ5 107 aa-1.39□□□□□ -2.63
SNORD28B-201ENST00000390993 IFI6P09912 130 aa-1.39□□□□□ -2.63
SNORD28B-201ENST00000390993 S100A12P80511 92 aa-1.39□□□□□ -2.63
SNORD28B-201ENST00000390993 PMCHL2Q9BQD1 86 aa-1.39□□□□□ -2.63
SNORD28B-201ENST00000390993 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.39□□□□□ -2.63
SNORD28B-201ENST00000390993 PLGLAQ15195 96 aa-1.4□□□□□ -2.63
SNORD28B-201ENST00000390993 RPL13AP3Q6NVV1 102 aa-1.4□□□□□ -2.63
SNORD28B-201ENST00000390993 ABCC10Q5T3U5 1492 aa-1.4□□□□□ -2.63
SNORD28B-201ENST00000390993 DEPDC5O75140 1603 aa-1.4□□□□□ -2.63
SNORD28B-201ENST00000390993 USP32Q8NFA0 1604 aa-1.4□□□□□ -2.63
SNORD28B-201ENST00000390993 PRDM15P57071 1507 aaPredicted RBP-1.4□□□□□ -2.63
SNORD28B-201ENST00000390993 SCN11AQ9UI33 1791 aa-1.41□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms