RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 CDC42SE1Q9NRR8 79 aa10.13□□□□□ -0.79
ALK-201ENST00000389048 FN1P02751 2386 aaKnown RBP10.13□□□□□ -0.79
ALK-201ENST00000389048 ZNF861PO60384 105 aa10.12□□□□□ -0.79
ALK-201ENST00000389048 CSNK1G2-AS1Q8NCQ2 148 aa10.11□□□□□ -0.79
ALK-201ENST00000389048 EP400Q96L91 3159 aa10.11□□□□□ -0.79
ALK-201ENST00000389048 WIPF1O43516 503 aa10.11□□□□□ -0.79
ALK-201ENST00000389048 LRRK2Q5S007 2527 aa10.09□□□□□ -0.79
ALK-201ENST00000389048 K7EIL1 84 aa10.09□□□□□ -0.79
ALK-201ENST00000389048 FAM104AQ969W3 186 aa10.08□□□□□ -0.8
ALK-201ENST00000389048 KRTAP10-3P60369 221 aa10.07□□□□□ -0.8
ALK-201ENST00000389048 A0A087WTM6 91 aa10.05□□□□□ -0.8
ALK-201ENST00000389048 RBM12B-AS1Q9P1G2 102 aa10.05□□□□□ -0.8
ALK-201ENST00000389048 PSORS1C2Q9UIG4 136 aa10.05□□□□□ -0.8
ALK-201ENST00000389048 GOLGB1Q14789 3259 aaKnown RBP10.04□□□□□ -0.8
ALK-201ENST00000389048 JMJD1CQ15652 2540 aa10.03□□□□□ -0.8
ALK-201ENST00000389048 H3BS24 57 aa10.03□□□□□ -0.8
ALK-201ENST00000389048 MYO9AB2RTY4 2548 aa10.02□□□□□ -0.8
ALK-201ENST00000389048 IGLV7-43P04211 117 aa10.02□□□□□ -0.81
ALK-201ENST00000389048 A0A1W2PNM2 257 aa10□□□□□ -0.81
ALK-201ENST00000389048 PRR26Q8N8Z3 221 aa10□□□□□ -0.81
ALK-201ENST00000389048 C9orf163Q8N9P6 203 aa9.99□□□□□ -0.81
ALK-201ENST00000389048 TLN1Q9Y490 2541 aaKnown RBP9.99□□□□□ -0.81
ALK-201ENST00000389048 CENPFP49454 3210 aa9.99□□□□□ -0.81
ALK-201ENST00000389048 PCSK5Q92824 1860 aa9.99□□□□□ -0.81
ALK-201ENST00000389048 LUZP6Q538Z0 58 aa9.98□□□□□ -0.81
ALK-201ENST00000389048 PRAC1Q96KF2 57 aa9.98□□□□□ -0.81
ALK-201ENST00000389048 PRR34Q9NV39 138 aa9.98□□□□□ -0.81
ALK-201ENST00000389048 GIG44P09565 113 aaPredicted RBP9.97□□□□□ -0.81
ALK-201ENST00000389048 SPRR4Q96PI1 79 aa9.96□□□□□ -0.82
ALK-201ENST00000389048 FAM229BQ4G0N7 80 aa9.94□□□□□ -0.82
ALK-201ENST00000389048 ABCA12Q86UK0 2595 aa9.94□□□□□ -0.82
ALK-201ENST00000389048 ZFYVE26Q68DK2 2539 aa9.93□□□□□ -0.82
ALK-201ENST00000389048 C19orf73Q9NVV2 129 aa9.9□□□□□ -0.82
ALK-201ENST00000389048 CAMK2N1Q7Z7J9 78 aa9.9□□□□□ -0.83
ALK-201ENST00000389048 ZNF462Q96JM2 2506 aa9.88□□□□□ -0.83
ALK-201ENST00000389048 Q1T7F1 81 aa9.87□□□□□ -0.83
ALK-201ENST00000389048 TLX1NBP0CAT3 122 aa9.87□□□□□ -0.83
ALK-201ENST00000389048 M0R2T5 61 aa9.86□□□□□ -0.83
ALK-201ENST00000389048 LINC00612Q8N6U2 182 aa9.86□□□□□ -0.83
ALK-201ENST00000389048 TLN2Q9Y4G6 2542 aa9.86□□□□□ -0.83
ALK-201ENST00000389048 PLA2G2DQ9UNK4 145 aa9.86□□□□□ -0.83
ALK-201ENST00000389048 SPANXA2-OT1Q8N9U9 137 aa9.85□□□□□ -0.83
ALK-201ENST00000389048 Q6ZSA8 131 aa9.84□□□□□ -0.83
ALK-201ENST00000389048 A0A1B0GU33 70 aa9.81□□□□□ -0.84
ALK-201ENST00000389048 CHD8Q9HCK8 2581 aa9.81□□□□□ -0.84
ALK-201ENST00000389048 Q5XG85 94 aa9.8□□□□□ -0.84
ALK-201ENST00000389048 HRES1P13985 223 aa9.8□□□□□ -0.84
ALK-201ENST00000389048 OCR1Q9BZK8 76 aa9.79□□□□□ -0.84
ALK-201ENST00000389048 CYSTM1Q9H1C7 97 aa9.79□□□□□ -0.84
ALK-201ENST00000389048 SETD2Q9BYW2 2564 aaPredicted RBP9.79□□□□□ -0.84
ALK-201ENST00000389048 CSAG1Q6PB30 78 aa9.78□□□□□ -0.84
ALK-201ENST00000389048 KLK9Q2XQG4 91 aa9.78□□□□□ -0.84
ALK-201ENST00000389048 TNP2Q05952 138 aa9.78□□□□□ -0.84
ALK-201ENST00000389048 LINC00483Q53H64 154 aa9.77□□□□□ -0.84
ALK-201ENST00000389048 CNBPP62633 177 aaKnown RBP9.76□□□□□ -0.85
ALK-201ENST00000389048 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.75□□□□□ -0.85
ALK-201ENST00000389048 IGLV7-46A0A075B6I9 117 aa9.74□□□□□ -0.85
ALK-201ENST00000389048 Q75L30 129 aa9.74□□□□□ -0.85
ALK-201ENST00000389048 CR1P17927 2039 aa9.73□□□□□ -0.85
ALK-201ENST00000389048 Q8N9P0 234 aaPredicted RBP9.72□□□□□ -0.85
ALK-201ENST00000389048 ANKRD11Q6UB99 2663 aaPredicted RBP9.71□□□□□ -0.85
ALK-201ENST00000389048 USP9XQ93008 2570 aaPredicted RBP9.71□□□□□ -0.86
ALK-201ENST00000389048 F8P00451 2351 aa9.7□□□□□ -0.86
ALK-201ENST00000389048 PKD1L2Q7Z442 2459 aa9.7□□□□□ -0.86
ALK-201ENST00000389048 FP248Q71RG6 208 aaPredicted RBP9.69□□□□□ -0.86
ALK-201ENST00000389048 SPTBN4Q9H254 2564 aa9.69□□□□□ -0.86
ALK-201ENST00000389048 A0A096LNT2 108 aa9.68□□□□□ -0.86
ALK-201ENST00000389048 S4R3F8 94 aa9.68□□□□□ -0.86
ALK-201ENST00000389048 SPINK7P58062 85 aa9.67□□□□□ -0.86
ALK-201ENST00000389048 CEP295Q9C0D2 2601 aa9.67□□□□□ -0.86
ALK-201ENST00000389048 ANKRD17O75179 2603 aaKnown RBP9.66□□□□□ -0.86
ALK-201ENST00000389048 FASNP49327 2511 aaKnown RBP9.64□□□□□ -0.87
ALK-201ENST00000389048 Q5VV11 94 aa9.63□□□□□ -0.87
ALK-201ENST00000389048 ACANP16112 2415 aa9.61□□□□□ -0.87
ALK-201ENST00000389048 UTRNP46939 3433 aa9.61□□□□□ -0.87
ALK-201ENST00000389048 A0A0A0MQY5 61 aa9.59□□□□□ -0.87
ALK-201ENST00000389048 LINC01558Q9Y6Z2 57 aa9.59□□□□□ -0.87
ALK-201ENST00000389048 Q8NDZ9 215 aa9.58□□□□□ -0.88
ALK-201ENST00000389048 MMP24-AS1A0A0U1RRL7 71 aa9.58□□□□□ -0.88
ALK-201ENST00000389048 ZCCHC13Q8WW36 166 aaKnown RBP9.57□□□□□ -0.88
ALK-201ENST00000389048 POLQO75417 2590 aa9.57□□□□□ -0.88
ALK-201ENST00000389048 KRTAP1-3Q8IUG1 177 aa9.54□□□□□ -0.88
ALK-201ENST00000389048 Q5W150 140 aa9.53□□□□□ -0.88
ALK-201ENST00000389048 DMAC1Q96GE9 116 aa9.53□□□□□ -0.88
ALK-201ENST00000389048 OXTP01178 125 aa9.52□□□□□ -0.88
ALK-201ENST00000389048 R4GN34 69 aa9.5□□□□□ -0.89
ALK-201ENST00000389048 MTORP42345 2549 aa9.5□□□□□ -0.89
ALK-201ENST00000389048 USP9YO00507 2555 aaPredicted RBP9.49□□□□□ -0.89
ALK-201ENST00000389048 KRTAP1-1Q07627 177 aa9.47□□□□□ -0.89
ALK-201ENST00000389048 DNAH12Q6ZR08 3092 aa9.46□□□□□ -0.89
ALK-201ENST00000389048 SPATA8Q6RVD6 105 aa9.43□□□□□ -0.9
ALK-201ENST00000389048 M0QZ58 72 aa9.39□□□□□ -0.91
ALK-201ENST00000389048 BPTFQ12830 3046 aa9.38□□□□□ -0.91
ALK-201ENST00000389048 ROMO1P60602 79 aa9.37□□□□□ -0.91
ALK-201ENST00000389048 PLAC8Q9NZF1 115 aa9.36□□□□□ -0.91
ALK-201ENST00000389048 H1FX-AS1Q4G0G2 97 aa9.34□□□□□ -0.91
ALK-201ENST00000389048 LINC00472Q9H8W2 130 aa9.34□□□□□ -0.91
ALK-201ENST00000389048 ADM2Q7Z4H4 148 aa9.32□□□□□ -0.92
ALK-201ENST00000389048 C5orf42Q9H799 3197 aa9.31□□□□□ -0.92
ALK-201ENST00000389048 RPL37P61927 97 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms