RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 NRAPQ86VF7 1730 aa-4.9□□□□□ -3.19
RNU6-1340P-201ENST00000384438 ANKRD36BQ8N2N9 1353 aa-4.91□□□□□ -3.19
RNU6-1340P-201ENST00000384438 K7EPI3 171 aa-4.91□□□□□ -3.2
RNU6-1340P-201ENST00000384438 REEP5Q00765 189 aa-4.91□□□□□ -3.2
RNU6-1340P-201ENST00000384438 KCNRGQ8N5I3 272 aa-4.91□□□□□ -3.2
RNU6-1340P-201ENST00000384438 CFAP53Q96M91 514 aa-4.91□□□□□ -3.2
RNU6-1340P-201ENST00000384438 C1orf109Q9NX04 203 aa-4.91□□□□□ -3.2
RNU6-1340P-201ENST00000384438 CCDC88BA6NC98 1476 aa-4.92□□□□□ -3.2
RNU6-1340P-201ENST00000384438 A2MP01023 1474 aa-4.92□□□□□ -3.2
RNU6-1340P-201ENST00000384438 CCDC180Q9P1Z9 1646 aa-4.92□□□□□ -3.2
RNU6-1340P-201ENST00000384438 NDUFB6O95139 128 aa-4.92□□□□□ -3.2
RNU6-1340P-201ENST00000384438 RPS12P25398 132 aaKnown RBP-4.92□□□□□ -3.2
RNU6-1340P-201ENST00000384438 TCL1AP56279 114 aa-4.92□□□□□ -3.2
RNU6-1340P-201ENST00000384438 PAIP2Q9BPZ3 127 aaKnown RBP-4.92□□□□□ -3.2
RNU6-1340P-201ENST00000384438 MYH4Q9Y623 1939 aa-4.92□□□□□ -3.2
RNU6-1340P-201ENST00000384438 ABCC9O60706 1549 aa-4.92□□□□□ -3.2
RNU6-1340P-201ENST00000384438 PFDN6O15212 129 aa-4.93□□□□□ -3.2
RNU6-1340P-201ENST00000384438 APOA2P02652 100 aa-4.93□□□□□ -3.2
RNU6-1340P-201ENST00000384438 THEM6Q8WUY1 208 aa-4.93□□□□□ -3.2
RNU6-1340P-201ENST00000384438 GAFA1Q96PS6 74 aa-4.93□□□□□ -3.2
RNU6-1340P-201ENST00000384438 TOP2BQ02880 1626 aa-4.94□□□□□ -3.2
RNU6-1340P-201ENST00000384438 F8VZ95 297 aa-4.94□□□□□ -3.2
RNU6-1340P-201ENST00000384438 SMLR1H3BR10 107 aa-4.94□□□□□ -3.2
RNU6-1340P-201ENST00000384438 PSPHP78330 225 aa-4.94□□□□□ -3.2
RNU6-1340P-201ENST00000384438 SPTSSAQ969W0 71 aa-4.94□□□□□ -3.2
RNU6-1340P-201ENST00000384438 CCNB3Q8WWL7 1395 aa-4.94□□□□□ -3.2
RNU6-1340P-201ENST00000384438 DEFB131BA0A096LNP1 70 aa-4.95□□□□□ -3.2
RNU6-1340P-201ENST00000384438 HIST1H1AQ02539 215 aaPredicted RBP-4.95□□□□□ -3.2
RNU6-1340P-201ENST00000384438 ARL11Q969Q4 196 aa-4.95□□□□□ -3.2
RNU6-1340P-201ENST00000384438 DPH3P1Q9H4G8 78 aa-4.95□□□□□ -3.2
RNU6-1340P-201ENST00000384438 BZW2Q9Y6E2 419 aaKnown RBP-4.95□□□□□ -3.2
RNU6-1340P-201ENST00000384438 TMEM218A2RU14 115 aa-4.96□□□□□ -3.2
RNU6-1340P-201ENST00000384438 MUSTN1Q8IVN3 82 aa-4.96□□□□□ -3.2
RNU6-1340P-201ENST00000384438 DIP2BQ9P265 1576 aa-4.96□□□□□ -3.2
RNU6-1340P-201ENST00000384438 VPS8Q8N3P4 1428 aa-4.97□□□□□ -3.2
RNU6-1340P-201ENST00000384438 A0A1W2PPV4 95 aa-4.97□□□□□ -3.21
RNU6-1340P-201ENST00000384438 S100A11P31949 105 aa-4.97□□□□□ -3.21
RNU6-1340P-201ENST00000384438 LTN1O94822 1766 aa-4.98□□□□□ -3.21
RNU6-1340P-201ENST00000384438 INO80Q9ULG1 1556 aaPredicted RBP-4.98□□□□□ -3.21
RNU6-1340P-201ENST00000384438 SMIM23A6NLE4 172 aa-4.98□□□□□ -3.21
RNU6-1340P-201ENST00000384438 E7EQ34 232 aa-4.98□□□□□ -3.21
RNU6-1340P-201ENST00000384438 TNNC2P02585 160 aa-4.98□□□□□ -3.21
RNU6-1340P-201ENST00000384438 SCTP09683 121 aa-4.98□□□□□ -3.21
RNU6-1340P-201ENST00000384438 TRAPPC2P0DI81 140 aa-4.98□□□□□ -3.21
RNU6-1340P-201ENST00000384438 TRAPPC2BP0DI82 140 aa-4.98□□□□□ -3.21
RNU6-1340P-201ENST00000384438 HMGN5P82970 282 aaKnown RBP-4.98□□□□□ -3.21
RNU6-1340P-201ENST00000384438 CROCCP2Q86T23 111 aa-4.98□□□□□ -3.21
RNU6-1340P-201ENST00000384438 LINC00523Q86TU6 105 aa-4.98□□□□□ -3.21
RNU6-1340P-201ENST00000384438 COX6CP09669 75 aa-4.99□□□□□ -3.21
RNU6-1340P-201ENST00000384438 BCAP31P51572 246 aa-4.99□□□□□ -3.21
RNU6-1340P-201ENST00000384438 PPP1R2P3Q6NXS1 205 aa-4.99□□□□□ -3.21
RNU6-1340P-201ENST00000384438 CTAGE3PQ8IX95 158 aa-4.99□□□□□ -3.21
RNU6-1340P-201ENST00000384438 C20orf78Q9BR46 151 aa-4.99□□□□□ -3.21
RNU6-1340P-201ENST00000384438 LINC00474Q9P2X8 69 aa-4.99□□□□□ -3.21
RNU6-1340P-201ENST00000384438 KAAG1Q9UBP8 84 aa-4.99□□□□□ -3.21
RNU6-1340P-201ENST00000384438 RNF17Q9BXT8 1623 aaKnown RBP-4.99□□□□□ -3.21
RNU6-1340P-201ENST00000384438 FAM24AA6NFZ4 105 aa-5□□□□□ -3.21
RNU6-1340P-201ENST00000384438 CRYM-AS1A6NIL9 109 aa-5□□□□□ -3.21
RNU6-1340P-201ENST00000384438 OOSP1A8MZH6 123 aa-5□□□□□ -3.21
RNU6-1340P-201ENST00000384438 TSPAN19P0C672 248 aa-5□□□□□ -3.21
RNU6-1340P-201ENST00000384438 CRIP1P50238 77 aa-5□□□□□ -3.21
RNU6-1340P-201ENST00000384438 CC2D2AQ9P2K1 1620 aa-5.01□□□□□ -3.21
RNU6-1340P-201ENST00000384438 HSPE1P61604 102 aaKnown RBP-5.01□□□□□ -3.21
RNU6-1340P-201ENST00000384438 GNG5P63218 68 aa-5.01□□□□□ -3.21
RNU6-1340P-201ENST00000384438 ACBD7Q8N6N7 88 aa-5.01□□□□□ -3.21
RNU6-1340P-201ENST00000384438 TCEAL4Q96EI5 215 aa-5.01□□□□□ -3.21
RNU6-1340P-201ENST00000384438 ARHGAP35Q9NRY4 1499 aa-5.01□□□□□ -3.21
RNU6-1340P-201ENST00000384438 SCRIBQ14160 1630 aa-5.01□□□□□ -3.21
RNU6-1340P-201ENST00000384438 C3P01024 1663 aa-5.02□□□□□ -3.21
RNU6-1340P-201ENST00000384438 GLI2P10070 1586 aa-5.02□□□□□ -3.21
RNU6-1340P-201ENST00000384438 OVOS2A0A0J9YW53 1432 aa-5.02□□□□□ -3.21
RNU6-1340P-201ENST00000384438 OVOS2Q6IE36 1432 aa-5.02□□□□□ -3.21
RNU6-1340P-201ENST00000384438 HIST1H1EP10412 219 aaKnown RBP-5.02□□□□□ -3.21
RNU6-1340P-201ENST00000384438 CCL2P13500 99 aa-5.02□□□□□ -3.21
RNU6-1340P-201ENST00000384438 C12orf57Q99622 126 aa-5.02□□□□□ -3.21
RNU6-1340P-201ENST00000384438 BANF2Q9H503 90 aa-5.02□□□□□ -3.21
RNU6-1340P-201ENST00000384438 SAR1AQ9NR31 198 aa-5.02□□□□□ -3.21
RNU6-1340P-201ENST00000384438 CCDC144AA2RUR9 1427 aa-5.03□□□□□ -3.21
RNU6-1340P-201ENST00000384438 C9orf84Q5VXU9 1444 aa-5.03□□□□□ -3.21
RNU6-1340P-201ENST00000384438 Q56UQ5 140 aa-5.03□□□□□ -3.21
RNU6-1340P-201ENST00000384438 C7orf50Q9BRJ6 194 aaKnown RBP-5.03□□□□□ -3.21
RNU6-1340P-201ENST00000384438 VAMP8Q9BV40 100 aa-5.03□□□□□ -3.21
RNU6-1340P-201ENST00000384438 FAM107BQ9H098 131 aa-5.03□□□□□ -3.21
RNU6-1340P-201ENST00000384438 CTNNBIP1Q9NSA3 81 aaPredicted RBP-5.03□□□□□ -3.21
RNU6-1340P-201ENST00000384438 PIGBOS1A0A0B4J2F0 54 aa-5.04□□□□□ -3.22
RNU6-1340P-201ENST00000384438 IQCF6A8MYZ5 107 aa-5.04□□□□□ -3.22
RNU6-1340P-201ENST00000384438 M0R129 80 aa-5.04□□□□□ -3.22
RNU6-1340P-201ENST00000384438 SMIM24O75264 130 aa-5.04□□□□□ -3.22
RNU6-1340P-201ENST00000384438 ATG12O94817 140 aa-5.04□□□□□ -3.22
RNU6-1340P-201ENST00000384438 S100A8P05109 93 aa-5.04□□□□□ -3.22
RNU6-1340P-201ENST00000384438 PPP1R2P41236 205 aa-5.04□□□□□ -3.22
RNU6-1340P-201ENST00000384438 Q0VG73 95 aa-5.04□□□□□ -3.22
RNU6-1340P-201ENST00000384438 MYO5CQ9NQX4 1742 aa-5.04□□□□□ -3.22
RNU6-1340P-201ENST00000384438 G3V2T6 193 aa-5.05□□□□□ -3.22
RNU6-1340P-201ENST00000384438 BLVRAP53004 296 aa-5.05□□□□□ -3.22
RNU6-1340P-201ENST00000384438 SPANXDQ9BXN6 97 aa-5.05□□□□□ -3.22
RNU6-1340P-201ENST00000384438 PRO1854Q9UHT4 67 aa-5.05□□□□□ -3.22
RNU6-1340P-201ENST00000384438 SSR3Q9UNL2 185 aa-5.05□□□□□ -3.22
RNU6-1340P-201ENST00000384438 FOCADQ5VW36 1801 aa-5.05□□□□□ -3.22
RNU6-1340P-201ENST00000384438 H3BQ15 152 aa-5.06□□□□□ -3.22
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms