RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 J3QL48 77 aa9.31□□□□□ -0.92
SNPH-201ENST00000381867 KCNQ1DNQ9H478 68 aa9.31□□□□□ -0.92
SNPH-201ENST00000381867 KRTAP10-3P60369 221 aa9.3□□□□□ -0.92
SNPH-201ENST00000381867 CHD7Q9P2D1 2997 aa9.3□□□□□ -0.92
SNPH-201ENST00000381867 K7EIL1 84 aa9.3□□□□□ -0.92
SNPH-201ENST00000381867 SSBP3-AS1Q7Z2R9 100 aa9.3□□□□□ -0.92
SNPH-201ENST00000381867 IGLV1-50A0A075B6I6 118 aa9.29□□□□□ -0.92
SNPH-201ENST00000381867 LINC00612Q8N6U2 182 aa9.29□□□□□ -0.92
SNPH-201ENST00000381867 KRTAP10-11P60412 298 aa9.28□□□□□ -0.92
SNPH-201ENST00000381867 PLA2G1BP04054 148 aaKnown RBP9.28□□□□□ -0.92
SNPH-201ENST00000381867 FAM168BA1KXE4 195 aa9.28□□□□□ -0.92
SNPH-201ENST00000381867 Q96NJ1 140 aa9.28□□□□□ -0.92
SNPH-201ENST00000381867 PRR15Q8IV56 129 aa9.27□□□□□ -0.93
SNPH-201ENST00000381867 IGFL1Q6UW32 110 aa9.27□□□□□ -0.93
SNPH-201ENST00000381867 MIR22HGQ0VDD5 57 aa9.26□□□□□ -0.93
SNPH-201ENST00000381867 KTN1-AS1Q86SY8 53 aa9.26□□□□□ -0.93
SNPH-201ENST00000381867 C8orf17Q9NRJ1 99 aa9.25□□□□□ -0.93
SNPH-201ENST00000381867 UTRNP46939 3433 aa9.23□□□□□ -0.93
SNPH-201ENST00000381867 TRANK1O15050 2925 aa9.23□□□□□ -0.93
SNPH-201ENST00000381867 GIG44P09565 113 aaPredicted RBP9.22□□□□□ -0.93
SNPH-201ENST00000381867 LCA10Q71F78 164 aa9.21□□□□□ -0.93
SNPH-201ENST00000381867 HTTP42858 3142 aa9.21□□□□□ -0.94
SNPH-201ENST00000381867 Q8N377 158 aa9.21□□□□□ -0.94
SNPH-201ENST00000381867 HECTD1Q9ULT8 2610 aa9.19□□□□□ -0.94
SNPH-201ENST00000381867 A0A1B0GVX0 72 aa9.19□□□□□ -0.94
SNPH-201ENST00000381867 CRIPTQ9P021 101 aa9.18□□□□□ -0.94
SNPH-201ENST00000381867 WIPF1O43516 503 aa9.17□□□□□ -0.94
SNPH-201ENST00000381867 PRR34Q9NV39 138 aa9.17□□□□□ -0.94
SNPH-201ENST00000381867 DSCR10P59022 87 aa9.16□□□□□ -0.94
SNPH-201ENST00000381867 FLNBO75369 2602 aaKnown RBP9.16□□□□□ -0.94
SNPH-201ENST00000381867 C15orf56Q8N910 161 aa9.15□□□□□ -0.94
SNPH-201ENST00000381867 C9orf129Q5T035 196 aaKnown RBP9.15□□□□□ -0.95
SNPH-201ENST00000381867 SPANXA2-OT1Q8N9U9 137 aa9.15□□□□□ -0.95
SNPH-201ENST00000381867 APLNQ9ULZ1 77 aa9.12□□□□□ -0.95
SNPH-201ENST00000381867 PLA2G2DQ9UNK4 145 aa9.12□□□□□ -0.95
SNPH-201ENST00000381867 ZNF292O60281 2723 aa9.12□□□□□ -0.95
SNPH-201ENST00000381867 CEP350Q5VT06 3117 aa9.12□□□□□ -0.95
SNPH-201ENST00000381867 CDC42SE1Q9NRR8 79 aa9.11□□□□□ -0.95
SNPH-201ENST00000381867 PRRC2CQ9Y520 2896 aaKnown RBP9.11□□□□□ -0.95
SNPH-201ENST00000381867 COX6B2Q6YFQ2 88 aa9.1□□□□□ -0.95
SNPH-201ENST00000381867 HELZ2Q9BYK8 2649 aaKnown RBP9.1□□□□□ -0.95
SNPH-201ENST00000381867 TLX1NBP0CAT3 122 aa9.09□□□□□ -0.95
SNPH-201ENST00000381867 A0A0G2JQZ4 141 aa9.09□□□□□ -0.95
SNPH-201ENST00000381867 A0A1W2PNN7 141 aa9.09□□□□□ -0.95
SNPH-201ENST00000381867 OBSCN-AS1Q96MR7 158 aa9.07□□□□□ -0.96
SNPH-201ENST00000381867 A0A1W2PNM2 257 aa9.07□□□□□ -0.96
SNPH-201ENST00000381867 SMR3BP02814 79 aaPredicted RBP9.06□□□□□ -0.96
SNPH-201ENST00000381867 ZNF861PO60384 105 aa9.06□□□□□ -0.96
SNPH-201ENST00000381867 Q1T7F1 81 aa9.04□□□□□ -0.96
SNPH-201ENST00000381867 FLNAP21333 2647 aaKnown RBP9.04□□□□□ -0.96
SNPH-201ENST00000381867 A0A087WTM6 91 aa9.03□□□□□ -0.96
SNPH-201ENST00000381867 LINC00304Q8N9R0 145 aa9.03□□□□□ -0.96
SNPH-201ENST00000381867 CR1P17927 2039 aa9.02□□□□□ -0.96
SNPH-201ENST00000381867 FAM104AQ969W3 186 aa9.02□□□□□ -0.97
SNPH-201ENST00000381867 OCR1Q9BZK8 76 aa9.01□□□□□ -0.97
SNPH-201ENST00000381867 IGLV5-48A0A075B6I7 105 aa9□□□□□ -0.97
SNPH-201ENST00000381867 USP24Q9UPU5 2620 aa8.98□□□□□ -0.97
SNPH-201ENST00000381867 ITPR3Q14573 2671 aa8.98□□□□□ -0.97
SNPH-201ENST00000381867 C9orf163Q8N9P6 203 aa8.97□□□□□ -0.97
SNPH-201ENST00000381867 C9orf92A6NGG3 77 aa8.96□□□□□ -0.97
SNPH-201ENST00000381867 CNBPP62633 177 aaKnown RBP8.96□□□□□ -0.97
SNPH-201ENST00000381867 SPRR4Q96PI1 79 aa8.96□□□□□ -0.98
SNPH-201ENST00000381867 ZNF575Q86XF7 245 aa8.94□□□□□ -0.98
SNPH-201ENST00000381867 MGAM2Q2M2H8 2515 aa8.93□□□□□ -0.98
SNPH-201ENST00000381867 ANAPC11Q9NYG5 84 aa8.93□□□□□ -0.98
SNPH-201ENST00000381867 IGLV5-37A0A075B6J1 123 aa8.92□□□□□ -0.98
SNPH-201ENST00000381867 IGLV7-43P04211 117 aa8.91□□□□□ -0.98
SNPH-201ENST00000381867 PRR26Q8N8Z3 221 aa8.9□□□□□ -0.98
SNPH-201ENST00000381867 Q8N1X5 172 aa8.9□□□□□ -0.98
SNPH-201ENST00000381867 Q75L30 129 aa8.9□□□□□ -0.98
SNPH-201ENST00000381867 CFAP46Q8IYW2 2715 aa8.9□□□□□ -0.98
SNPH-201ENST00000381867 A0A0D9SG42 100 aa8.89□□□□□ -0.99
SNPH-201ENST00000381867 PSORS1C2Q9UIG4 136 aa8.89□□□□□ -0.99
SNPH-201ENST00000381867 IGLV7-46A0A075B6I9 117 aa8.88□□□□□ -0.99
SNPH-201ENST00000381867 C5orf42Q9H799 3197 aa8.88□□□□□ -0.99
SNPH-201ENST00000381867 RBM12B-AS1Q9P1G2 102 aa8.88□□□□□ -0.99
SNPH-201ENST00000381867 RANBP2P49792 3224 aaKnown RBP8.87□□□□□ -0.99
SNPH-201ENST00000381867 Q5XG85 94 aa8.87□□□□□ -0.99
SNPH-201ENST00000381867 CASC10Q5T4H9 136 aa8.87□□□□□ -0.99
SNPH-201ENST00000381867 PCNTO95613 3336 aa8.86□□□□□ -0.99
SNPH-201ENST00000381867 LUZP6Q538Z0 58 aa8.82□□□□□ -1
SNPH-201ENST00000381867 FAM229BQ4G0N7 80 aa8.8□□□□□ -1
SNPH-201ENST00000381867 LINC01558Q9Y6Z2 57 aa8.8□□□□□ -1
SNPH-201ENST00000381867 LINC01554Q52M75 96 aa8.8□□□□□ -1
SNPH-201ENST00000381867 FP248Q71RG6 208 aaPredicted RBP8.79□□□□□ -1
SNPH-201ENST00000381867 Q8N9P0 234 aaPredicted RBP8.79□□□□□ -1
SNPH-201ENST00000381867 ATRQ13535 2644 aa8.77□□□□□ -1.01
SNPH-201ENST00000381867 HRES1P13985 223 aa8.77□□□□□ -1.01
SNPH-201ENST00000381867 A0A1B0GU33 70 aa8.76□□□□□ -1.01
SNPH-201ENST00000381867 BPTFQ12830 3046 aa8.76□□□□□ -1.01
SNPH-201ENST00000381867 TNP2Q05952 138 aa8.76□□□□□ -1.01
SNPH-201ENST00000381867 CYSTM1Q9H1C7 97 aa8.76□□□□□ -1.01
SNPH-201ENST00000381867 IGSF10Q6WRI0 2623 aa8.74□□□□□ -1.01
SNPH-201ENST00000381867 MAST4O15021 2626 aa8.74□□□□□ -1.01
SNPH-201ENST00000381867 MMP24-AS1A0A0U1RRL7 71 aa8.71□□□□□ -1.01
SNPH-201ENST00000381867 AKAP13Q12802 2813 aa8.71□□□□□ -1.01
SNPH-201ENST00000381867 UNC79Q9P2D8 2635 aa8.71□□□□□ -1.02
SNPH-201ENST00000381867 Q5VV11 94 aa8.7□□□□□ -1.02
SNPH-201ENST00000381867 PRAC1Q96KF2 57 aa8.7□□□□□ -1.02
SNPH-201ENST00000381867 CENPEQ02224 2701 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms