RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 SNURFQ9Y675 71 aa8.15□□□□□ -1.1
GABPB1-203ENST00000380877 CCDC179H3BU77 68 aa8.15□□□□□ -1.11
GABPB1-203ENST00000380877 IGLV6-57P01721 117 aa8.15□□□□□ -1.11
GABPB1-203ENST00000380877 NBEAL1Q6ZS30 2694 aa8.14□□□□□ -1.11
GABPB1-203ENST00000380877 RTL8CO15255 209 aa8.14□□□□□ -1.11
GABPB1-203ENST00000380877 USP34Q70CQ2 3546 aa8.13□□□□□ -1.11
GABPB1-203ENST00000380877 FAM236DA0A1B0GTK5 79 aa8.13□□□□□ -1.11
GABPB1-203ENST00000380877 FAM236CP0DP71 79 aa8.13□□□□□ -1.11
GABPB1-203ENST00000380877 LINC01547P58512 204 aaPredicted RBP8.12□□□□□ -1.11
GABPB1-203ENST00000380877 DEFB116Q30KQ4 102 aa8.12□□□□□ -1.11
GABPB1-203ENST00000380877 FAM30AQ9NZY2 134 aa8.12□□□□□ -1.11
GABPB1-203ENST00000380877 FAM168BA1KXE4 195 aa8.12□□□□□ -1.11
GABPB1-203ENST00000380877 ZANQ9Y493 2812 aa8.11□□□□□ -1.11
GABPB1-203ENST00000380877 SERTAD4-AS1Q5TG53 156 aa8.11□□□□□ -1.11
GABPB1-203ENST00000380877 TRAV7A0A075B6U4 112 aa8.1□□□□□ -1.11
GABPB1-203ENST00000380877 APCP25054 2843 aa8.1□□□□□ -1.11
GABPB1-203ENST00000380877 NSD1Q96L73 2696 aaPredicted RBP8.1□□□□□ -1.11
GABPB1-203ENST00000380877 MYO15AQ9UKN7 3530 aa8.1□□□□□ -1.11
GABPB1-203ENST00000380877 NDUFC1O43677 76 aa8.1□□□□□ -1.11
GABPB1-203ENST00000380877 TRBV7-7A0A0K0K1E9 115 aa8.09□□□□□ -1.12
GABPB1-203ENST00000380877 ST20-AS1Q8NBB2 130 aa8.09□□□□□ -1.12
GABPB1-203ENST00000380877 EPM2AB3EWF7 344 aa8.08□□□□□ -1.12
GABPB1-203ENST00000380877 HIVEP1P15822 2718 aa8.08□□□□□ -1.12
GABPB1-203ENST00000380877 IGHV6-1A0A0B4J1U7 121 aa8.08□□□□□ -1.12
GABPB1-203ENST00000380877 C5orf47Q569G3 176 aa8.08□□□□□ -1.12
GABPB1-203ENST00000380877 FAM104AQ969W3 186 aa8.07□□□□□ -1.12
GABPB1-203ENST00000380877 Q6ZQT0 140 aa8.07□□□□□ -1.12
GABPB1-203ENST00000380877 Q8N9L7 120 aa8.07□□□□□ -1.12
GABPB1-203ENST00000380877 CXCL6P80162 114 aa8.06□□□□□ -1.12
GABPB1-203ENST00000380877 KCNQ1DNQ9H478 68 aa8.06□□□□□ -1.12
GABPB1-203ENST00000380877 CASC2Q6XLA1 102 aa8.06□□□□□ -1.12
GABPB1-203ENST00000380877 IGLV1-50A0A075B6I6 118 aa8.05□□□□□ -1.12
GABPB1-203ENST00000380877 PRR4Q16378 134 aa8.05□□□□□ -1.12
GABPB1-203ENST00000380877 Q8NBF4 154 aa8.05□□□□□ -1.12
GABPB1-203ENST00000380877 LOC110117498A0A087WWA1 95 aa8.05□□□□□ -1.12
GABPB1-203ENST00000380877 C9orf129Q5T035 196 aaKnown RBP8.05□□□□□ -1.12
GABPB1-203ENST00000380877 CASC10Q5T4H9 136 aa8.05□□□□□ -1.12
GABPB1-203ENST00000380877 APLNQ9ULZ1 77 aa8.05□□□□□ -1.12
GABPB1-203ENST00000380877 MOBPQ13875 183 aa8.04□□□□□ -1.12
GABPB1-203ENST00000380877 LINC00528Q8N1L1 170 aa8.04□□□□□ -1.12
GABPB1-203ENST00000380877 LINC00476Q8WZB0 136 aa8.04□□□□□ -1.12
GABPB1-203ENST00000380877 BCE1O60756 84 aa8.03□□□□□ -1.12
GABPB1-203ENST00000380877 LINC00208Q96KT6 92 aa8.03□□□□□ -1.12
GABPB1-203ENST00000380877 A0A1B0GW54 56 aa8.02□□□□□ -1.13
GABPB1-203ENST00000380877 TLX1NBP0CAT3 122 aa8.02□□□□□ -1.13
GABPB1-203ENST00000380877 C9orf163Q8N9P6 203 aa8.01□□□□□ -1.13
GABPB1-203ENST00000380877 ATP5EP56381 51 aaPredicted RBP8.01□□□□□ -1.13
GABPB1-203ENST00000380877 HCG22E2RYF7 251 aa8.01□□□□□ -1.13
GABPB1-203ENST00000380877 A0A087WTM6 91 aa8□□□□□ -1.13
GABPB1-203ENST00000380877 HRNRQ86YZ3 2850 aaPredicted RBP7.98□□□□□ -1.13
GABPB1-203ENST00000380877 MPLKIPQ8TAP9 179 aa7.98□□□□□ -1.13
GABPB1-203ENST00000380877 LIMD2Q9BT23 127 aa7.97□□□□□ -1.13
GABPB1-203ENST00000380877 PLA2G2DQ9UNK4 145 aa7.97□□□□□ -1.13
GABPB1-203ENST00000380877 TMEM254Q8TBM7 123 aa7.96□□□□□ -1.13
GABPB1-203ENST00000380877 CNBPP62633 177 aaKnown RBP7.95□□□□□ -1.14
GABPB1-203ENST00000380877 CRYGAP11844 174 aa7.94□□□□□ -1.14
GABPB1-203ENST00000380877 SMIM29Q86T20 159 aa7.94□□□□□ -1.14
GABPB1-203ENST00000380877 NIPBLQ6KC79 2804 aaeCLIP7.94□□□□□ -1.14
GABPB1-203ENST00000380877 TRBV7-4A0A0J9YYF1 115 aa7.93□□□□□ -1.14
GABPB1-203ENST00000380877 A0A1W2PNN7 141 aa7.93□□□□□ -1.14
GABPB1-203ENST00000380877 H0Y9P7 68 aa7.93□□□□□ -1.14
GABPB1-203ENST00000380877 SPACA4Q8TDM5 124 aa7.93□□□□□ -1.14
GABPB1-203ENST00000380877 SEC61GP60059 68 aa7.92□□□□□ -1.14
GABPB1-203ENST00000380877 Q8N377 158 aa7.92□□□□□ -1.14
GABPB1-203ENST00000380877 MUC3AQ02505 3323 aa7.92□□□□□ -1.14
GABPB1-203ENST00000380877 CRYBG3Q68DQ2 2970 aa7.92□□□□□ -1.14
GABPB1-203ENST00000380877 ASH1LQ9NR48 2969 aaKnown RBP7.92□□□□□ -1.14
GABPB1-203ENST00000380877 CELSR2Q9HCU4 2923 aa7.92□□□□□ -1.14
GABPB1-203ENST00000380877 NF1P21359 2839 aa7.9□□□□□ -1.14
GABPB1-203ENST00000380877 RETNLBQ9BQ08 111 aa7.9□□□□□ -1.14
GABPB1-203ENST00000380877 PCOTHQ58A44 107 aa7.9□□□□□ -1.15
GABPB1-203ENST00000380877 hDV103S1A0JD37 113 aa7.88□□□□□ -1.15
GABPB1-203ENST00000380877 ZNF861PO60384 105 aa7.87□□□□□ -1.15
GABPB1-203ENST00000380877 TYMSOSQ8TAI1 123 aa7.87□□□□□ -1.15
GABPB1-203ENST00000380877 IGFL1Q6UW32 110 aa7.87□□□□□ -1.15
GABPB1-203ENST00000380877 FAM229AH3BQW9 127 aa7.87□□□□□ -1.15
GABPB1-203ENST00000380877 ERC2-IT1O76042 136 aa7.87□□□□□ -1.15
GABPB1-203ENST00000380877 BRK1Q8WUW1 75 aa7.86□□□□□ -1.15
GABPB1-203ENST00000380877 RPL37AP61513 92 aaKnown RBP7.86□□□□□ -1.15
GABPB1-203ENST00000380877 IGLV5-37A0A075B6J1 123 aa7.85□□□□□ -1.15
GABPB1-203ENST00000380877 SERP1Q9Y6X1 66 aa7.85□□□□□ -1.15
GABPB1-203ENST00000380877 V9GYY9 64 aa7.85□□□□□ -1.15
GABPB1-203ENST00000380877 KMT2BQ9UMN6 2715 aaPredicted RBP7.85□□□□□ -1.15
GABPB1-203ENST00000380877 C1orf64Q8NEQ6 169 aa7.85□□□□□ -1.15
GABPB1-203ENST00000380877 SMIM26A0A096LP01 95 aa7.84□□□□□ -1.15
GABPB1-203ENST00000380877 PSORS1C2Q9UIG4 136 aa7.83□□□□□ -1.16
GABPB1-203ENST00000380877 STAB2Q8WWQ8 2551 aa7.83□□□□□ -1.16
GABPB1-203ENST00000380877 PLA2G1BP04054 148 aaKnown RBP7.83□□□□□ -1.16
GABPB1-203ENST00000380877 A0A0G2JQZ4 141 aa7.83□□□□□ -1.16
GABPB1-203ENST00000380877 DCHS2Q6V1P9 2916 aa7.83□□□□□ -1.16
GABPB1-203ENST00000380877 TP53AIP1Q9HCN2 124 aa7.82□□□□□ -1.16
GABPB1-203ENST00000380877 K7EQZ3 153 aa7.82□□□□□ -1.16
GABPB1-203ENST00000380877 FBN2P35556 2912 aa7.82□□□□□ -1.16
GABPB1-203ENST00000380877 TNP2Q05952 138 aa7.8□□□□□ -1.16
GABPB1-203ENST00000380877 A8MWP4 228 aa7.8□□□□□ -1.16
GABPB1-203ENST00000380877 Q8NDZ9 215 aa7.79□□□□□ -1.16
GABPB1-203ENST00000380877 ANAPC11Q9NYG5 84 aa7.79□□□□□ -1.16
GABPB1-203ENST00000380877 IGKV2D-30A0A075B6S6 120 aa7.79□□□□□ -1.16
GABPB1-203ENST00000380877 IGKV2-30P06310 120 aa7.79□□□□□ -1.16
GABPB1-203ENST00000380877 RELNP78509 3460 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms