RNA–Protein interactions for RNA: ENST00000380874.3

FOXC1-201, Transcript of forkhead box C1, humanhuman

APPRIS P1 BASIC

Gene FOXC1, Length 3,926 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1-201ENST00000380874 H3BQ85 93 aa12.94□□□□□ -0.34
FOXC1-201ENST00000380874 TENM3Q9P273 2699 aa12.93□□□□□ -0.34
FOXC1-201ENST00000380874 LINC01547P58512 204 aaPredicted RBP12.91□□□□□ -0.34
FOXC1-201ENST00000380874 ELOF1P60002 83 aaKnown RBP12.91□□□□□ -0.34
FOXC1-201ENST00000380874 TMEM258P61165 79 aa12.9□□□□□ -0.34
FOXC1-201ENST00000380874 C7orf33Q8WU49 177 aa12.9□□□□□ -0.34
FOXC1-201ENST00000380874 PKD1L1Q8TDX9 2849 aa12.89□□□□□ -0.35
FOXC1-201ENST00000380874 SERTAD4-AS1Q5TG53 156 aa12.88□□□□□ -0.35
FOXC1-201ENST00000380874 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.87□□□□□ -0.35
FOXC1-201ENST00000380874 LINC00588Q9Y4M8 146 aa12.87□□□□□ -0.35
FOXC1-201ENST00000380874 Q8N9L7 120 aa12.86□□□□□ -0.35
FOXC1-201ENST00000380874 FAM168BA1KXE4 195 aa12.86□□□□□ -0.35
FOXC1-201ENST00000380874 WIPF1O43516 503 aa12.86□□□□□ -0.35
FOXC1-201ENST00000380874 CASC10Q5T4H9 136 aa12.86□□□□□ -0.35
FOXC1-201ENST00000380874 FUSP35637 526 aaKnown RBP eCLIP12.85□□□□□ -0.35
FOXC1-201ENST00000380874 LOC110117498A0A087WWA1 95 aa12.84□□□□□ -0.35
FOXC1-201ENST00000380874 SNURFQ9Y675 71 aa12.84□□□□□ -0.35
FOXC1-201ENST00000380874 F8WEM9 126 aa12.83□□□□□ -0.36
FOXC1-201ENST00000380874 BPY2O14599 106 aa12.82□□□□□ -0.36
FOXC1-201ENST00000380874 CRYGAP11844 174 aa12.81□□□□□ -0.36
FOXC1-201ENST00000380874 FBN1P35555 2871 aaKnown RBP12.81□□□□□ -0.36
FOXC1-201ENST00000380874 LINC00528Q8N1L1 170 aa12.81□□□□□ -0.36
FOXC1-201ENST00000380874 HIGD2AQ9BW72 106 aa12.81□□□□□ -0.36
FOXC1-201ENST00000380874 DNAH10OSP0CZ25 163 aa12.79□□□□□ -0.36
FOXC1-201ENST00000380874 KRTAP26-1Q6PEX3 210 aa12.79□□□□□ -0.36
FOXC1-201ENST00000380874 MDFIQ99750 246 aa12.79□□□□□ -0.36
FOXC1-201ENST00000380874 HRCT1Q6UXD1 115 aa12.78□□□□□ -0.36
FOXC1-201ENST00000380874 FAM236DA0A1B0GTK5 79 aa12.76□□□□□ -0.37
FOXC1-201ENST00000380874 FAM236CP0DP71 79 aa12.76□□□□□ -0.37
FOXC1-201ENST00000380874 ST20-AS1Q8NBB2 130 aa12.76□□□□□ -0.37
FOXC1-201ENST00000380874 DHRS4-AS1Q9P1J3 65 aa12.76□□□□□ -0.37
FOXC1-201ENST00000380874 TRBV7-6A0A0J9YX20 115 aa12.75□□□□□ -0.37
FOXC1-201ENST00000380874 CYSTM1Q9H1C7 97 aa12.75□□□□□ -0.37
FOXC1-201ENST00000380874 MRPL55Q7Z7F7 128 aaKnown RBP12.74□□□□□ -0.37
FOXC1-201ENST00000380874 TRBV7-4A0A0J9YYF1 115 aa12.72□□□□□ -0.37
FOXC1-201ENST00000380874 C1orf137Q5JT78 98 aa12.72□□□□□ -0.37
FOXC1-201ENST00000380874 TRAV7A0A075B6U4 112 aa12.71□□□□□ -0.37
FOXC1-201ENST00000380874 K7EIL1 84 aa12.71□□□□□ -0.37
FOXC1-201ENST00000380874 F8WDY8 70 aa12.7□□□□□ -0.38
FOXC1-201ENST00000380874 CXCL6P80162 114 aa12.69□□□□□ -0.38
FOXC1-201ENST00000380874 KCNQ1DNQ9H478 68 aa12.69□□□□□ -0.38
FOXC1-201ENST00000380874 A0A096LNI7 61 aa12.69□□□□□ -0.38
FOXC1-201ENST00000380874 PRLHP81277 87 aa12.69□□□□□ -0.38
FOXC1-201ENST00000380874 RPS28P62857 69 aaKnown RBP12.69□□□□□ -0.38
FOXC1-201ENST00000380874 STAB2Q8WWQ8 2551 aa12.68□□□□□ -0.38
FOXC1-201ENST00000380874 Q6ZRX8 168 aa12.68□□□□□ -0.38
FOXC1-201ENST00000380874 Q8N377 158 aa12.68□□□□□ -0.38
FOXC1-201ENST00000380874 PRYO14603 147 aa12.67□□□□□ -0.38
FOXC1-201ENST00000380874 REG3GQ6UW15 175 aa12.67□□□□□ -0.38
FOXC1-201ENST00000380874 TM2D3Q9BRN9 247 aa12.65□□□□□ -0.38
FOXC1-201ENST00000380874 IGLV1-50A0A075B6I6 118 aa12.63□□□□□ -0.39
FOXC1-201ENST00000380874 DEFB116Q30KQ4 102 aa12.62□□□□□ -0.39
FOXC1-201ENST00000380874 A0A0G2JQZ4 141 aa12.62□□□□□ -0.39
FOXC1-201ENST00000380874 A0A1W2PNN7 141 aa12.62□□□□□ -0.39
FOXC1-201ENST00000380874 ERC2-IT1O76042 136 aa12.61□□□□□ -0.39
FOXC1-201ENST00000380874 PKIGQ9Y2B9 76 aa12.61□□□□□ -0.39
FOXC1-201ENST00000380874 UBE2AP49459 152 aa12.6□□□□□ -0.39
FOXC1-201ENST00000380874 BRK1Q8WUW1 75 aa12.6□□□□□ -0.39
FOXC1-201ENST00000380874 FAM30AQ9NZY2 134 aa12.6□□□□□ -0.39
FOXC1-201ENST00000380874 CHTF8P0CG12 524 aa12.59□□□□□ -0.39
FOXC1-201ENST00000380874 Q9BRP9 147 aa12.59□□□□□ -0.39
FOXC1-201ENST00000380874 C4orf26Q17RF5 130 aa12.58□□□□□ -0.39
FOXC1-201ENST00000380874 TLX1NBP0CAT3 122 aa12.55□□□□□ -0.4
FOXC1-201ENST00000380874 SERP1Q9Y6X1 66 aa12.53□□□□□ -0.4
FOXC1-201ENST00000380874 C14orf177Q52M58 125 aa12.52□□□□□ -0.41
FOXC1-201ENST00000380874 PHF5AQ7RTV0 110 aaKnown RBP12.52□□□□□ -0.41
FOXC1-201ENST00000380874 TMEM254Q8TBM7 123 aa12.52□□□□□ -0.41
FOXC1-201ENST00000380874 A0A1W2PNM2 257 aa12.51□□□□□ -0.41
FOXC1-201ENST00000380874 WFDC13Q8IUB5 93 aa12.51□□□□□ -0.41
FOXC1-201ENST00000380874 Q8NBF4 154 aa12.51□□□□□ -0.41
FOXC1-201ENST00000380874 SMIM26A0A096LP01 95 aa12.51□□□□□ -0.41
FOXC1-201ENST00000380874 A0A0U1RQV1 116 aa12.51□□□□□ -0.41
FOXC1-201ENST00000380874 MPLKIPQ8TAP9 179 aa12.51□□□□□ -0.41
FOXC1-201ENST00000380874 A0A087WSZ3 146 aa12.51□□□□□ -0.41
FOXC1-201ENST00000380874 LINC00476Q8WZB0 136 aa12.5□□□□□ -0.41
FOXC1-201ENST00000380874 SMIM29Q86T20 159 aa12.5□□□□□ -0.41
FOXC1-201ENST00000380874 IGKV4-1P06312 121 aa12.48□□□□□ -0.41
FOXC1-201ENST00000380874 LY6G6CO95867 125 aa12.48□□□□□ -0.41
FOXC1-201ENST00000380874 PLA2G2DQ9UNK4 145 aa12.48□□□□□ -0.41
FOXC1-201ENST00000380874 KRTAP1-5Q9BYS1 174 aa12.47□□□□□ -0.41
FOXC1-201ENST00000380874 NDUFC1O43677 76 aa12.46□□□□□ -0.41
FOXC1-201ENST00000380874 C16orf90A8MZG2 172 aa12.46□□□□□ -0.41
FOXC1-201ENST00000380874 BCE1O60756 84 aa12.45□□□□□ -0.42
FOXC1-201ENST00000380874 IGLV5-48A0A075B6I7 105 aa12.44□□□□□ -0.42
FOXC1-201ENST00000380874 H7BZZ5 65 aa12.43□□□□□ -0.42
FOXC1-201ENST00000380874 B9D2Q9BPU9 175 aa12.43□□□□□ -0.42
FOXC1-201ENST00000380874 PRR4Q16378 134 aa12.42□□□□□ -0.42
FOXC1-201ENST00000380874 IGLV5-37A0A075B6J1 123 aa12.41□□□□□ -0.42
FOXC1-201ENST00000380874 K7EQZ3 153 aa12.4□□□□□ -0.42
FOXC1-201ENST00000380874 KRTAP7-1Q8IUC3 87 aa12.4□□□□□ -0.42
FOXC1-201ENST00000380874 PRO0628Q9UI54 55 aa12.4□□□□□ -0.43
FOXC1-201ENST00000380874 H0Y9J4 135 aa12.39□□□□□ -0.43
FOXC1-201ENST00000380874 ATP5EP56381 51 aaPredicted RBP12.39□□□□□ -0.43
FOXC1-201ENST00000380874 EPM2AB3EWF7 344 aa12.39□□□□□ -0.43
FOXC1-201ENST00000380874 SPRR1AP35321 89 aa12.38□□□□□ -0.43
FOXC1-201ENST00000380874 IGLV9-49A0A0B4J1Y8 123 aa12.38□□□□□ -0.43
FOXC1-201ENST00000380874 KLKP1Q107X0 134 aa12.38□□□□□ -0.43
FOXC1-201ENST00000380874 IGFL1Q6UW32 110 aa12.37□□□□□ -0.43
FOXC1-201ENST00000380874 RPL37AP61513 92 aaKnown RBP12.37□□□□□ -0.43
FOXC1-201ENST00000380874 KRTAP4-16G5E9R7 235 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms