RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 MRPL55Q7Z7F7 128 aaKnown RBP4.46□□□□□ -1.7
NEDD9-202ENST00000379446 LIMD2Q9BT23 127 aa4.46□□□□□ -1.7
NEDD9-202ENST00000379446 F8WDY8 70 aa4.46□□□□□ -1.7
NEDD9-202ENST00000379446 PHF5AQ7RTV0 110 aaKnown RBP4.45□□□□□ -1.7
NEDD9-202ENST00000379446 PKD1L1Q8TDX9 2849 aa4.45□□□□□ -1.7
NEDD9-202ENST00000379446 CASC2Q6XLA1 102 aa4.45□□□□□ -1.7
NEDD9-202ENST00000379446 Q5VSD8 79 aa4.45□□□□□ -1.7
NEDD9-202ENST00000379446 SPANXCQ9NY87 97 aa4.45□□□□□ -1.7
NEDD9-202ENST00000379446 NREPQ16612 68 aa4.45□□□□□ -1.7
NEDD9-202ENST00000379446 SMIM11BQ8TCY0 68 aa4.44□□□□□ -1.7
NEDD9-202ENST00000379446 NDUFC2-KCTD14E9PQ53 114 aa4.44□□□□□ -1.7
NEDD9-202ENST00000379446 V9GYY9 64 aa4.44□□□□□ -1.7
NEDD9-202ENST00000379446 H0YGX0 51 aa4.44□□□□□ -1.7
NEDD9-202ENST00000379446 PRR3P79522 188 aaKnown RBP4.44□□□□□ -1.7
NEDD9-202ENST00000379446 C10orf25Q5T742 122 aa4.44□□□□□ -1.7
NEDD9-202ENST00000379446 CDC42SE2Q9NRR3 84 aa4.44□□□□□ -1.7
NEDD9-202ENST00000379446 Q8N3U1 123 aa4.44□□□□□ -1.7
NEDD9-202ENST00000379446 TIMM17BO60830 172 aa4.43□□□□□ -1.7
NEDD9-202ENST00000379446 C1orf195Q5TG92 126 aa4.43□□□□□ -1.7
NEDD9-202ENST00000379446 C11orf72Q8NBR9 251 aa4.43□□□□□ -1.7
NEDD9-202ENST00000379446 CUBNO60494 3623 aa4.43□□□□□ -1.7
NEDD9-202ENST00000379446 SMIM1B2RUZ4 78 aa4.43□□□□□ -1.7
NEDD9-202ENST00000379446 Q8N814 137 aa4.43□□□□□ -1.7
NEDD9-202ENST00000379446 H3BS24 57 aa4.43□□□□□ -1.7
NEDD9-202ENST00000379446 C6orf99Q4VX62 202 aa4.43□□□□□ -1.7
NEDD9-202ENST00000379446 C9orf129Q5T035 196 aaKnown RBP4.43□□□□□ -1.7
NEDD9-202ENST00000379446 PLA2G2DQ9UNK4 145 aa4.43□□□□□ -1.7
NEDD9-202ENST00000379446 CHKB-CPT1BH3BT56 60 aa4.42□□□□□ -1.7
NEDD9-202ENST00000379446 LITAFQ99732 161 aa4.42□□□□□ -1.7
NEDD9-202ENST00000379446 FAM19A3Q7Z5A8 133 aa4.42□□□□□ -1.7
NEDD9-202ENST00000379446 RETNLBQ9BQ08 111 aa4.42□□□□□ -1.7
NEDD9-202ENST00000379446 C22orf24Q9Y442 160 aa4.42□□□□□ -1.7
NEDD9-202ENST00000379446 DHRS4-AS1Q9P1J3 65 aa4.42□□□□□ -1.7
NEDD9-202ENST00000379446 APCP25054 2843 aa4.42□□□□□ -1.7
NEDD9-202ENST00000379446 MOBPQ13875 183 aa4.42□□□□□ -1.7
NEDD9-202ENST00000379446 CR1P17927 2039 aa4.41□□□□□ -1.7
NEDD9-202ENST00000379446 BSNQ9UPA5 3926 aa4.41□□□□□ -1.7
NEDD9-202ENST00000379446 NTM-AS1Q6ZSK4 140 aa4.41□□□□□ -1.7
NEDD9-202ENST00000379446 NBEAL2Q6ZNJ1 2754 aa4.41□□□□□ -1.7
NEDD9-202ENST00000379446 A0A1B0GUV1 79 aa4.4□□□□□ -1.7
NEDD9-202ENST00000379446 A8MTW9 85 aa4.4□□□□□ -1.7
NEDD9-202ENST00000379446 Q6JHZ5 121 aa4.4□□□□□ -1.7
NEDD9-202ENST00000379446 Q8IZM0 81 aa4.4□□□□□ -1.7
NEDD9-202ENST00000379446 NDUFC2O95298 119 aa4.4□□□□□ -1.71
NEDD9-202ENST00000379446 LINC01561Q8N1V8 128 aa4.4□□□□□ -1.71
NEDD9-202ENST00000379446 ATP11AUNQ6ZP68 121 aa4.4□□□□□ -1.71
NEDD9-202ENST00000379446 PRO0628Q9UI54 55 aa4.39□□□□□ -1.71
NEDD9-202ENST00000379446 OXTP01178 125 aa4.39□□□□□ -1.71
NEDD9-202ENST00000379446 SEC61GP60059 68 aa4.39□□□□□ -1.71
NEDD9-202ENST00000379446 RPS28P62857 69 aaKnown RBP4.39□□□□□ -1.71
NEDD9-202ENST00000379446 JMJD7-PLA2G4BH0Y9G9 81 aa4.39□□□□□ -1.71
NEDD9-202ENST00000379446 ZNF73O43830 326 aaPredicted RBP4.39□□□□□ -1.71
NEDD9-202ENST00000379446 LINC00304Q8N9R0 145 aa4.39□□□□□ -1.71
NEDD9-202ENST00000379446 FAM104AQ969W3 186 aa4.39□□□□□ -1.71
NEDD9-202ENST00000379446 Q9BRP9 147 aa4.38□□□□□ -1.71
NEDD9-202ENST00000379446 IGLV5-39A0A0G2JS06 123 aa4.38□□□□□ -1.71
NEDD9-202ENST00000379446 SMIM26A0A096LP01 95 aa4.37□□□□□ -1.71
NEDD9-202ENST00000379446 Q8N9L7 120 aa4.37□□□□□ -1.71
NEDD9-202ENST00000379446 TENM1Q9UKZ4 2725 aa4.37□□□□□ -1.71
NEDD9-202ENST00000379446 FBN2P35556 2912 aa4.37□□□□□ -1.71
NEDD9-202ENST00000379446 MP68P56378 58 aa4.37□□□□□ -1.71
NEDD9-202ENST00000379446 TRBV10-3A0A0K0K1G6 114 aa4.37□□□□□ -1.71
NEDD9-202ENST00000379446 Q6ZQY7 126 aa4.37□□□□□ -1.71
NEDD9-202ENST00000379446 SPTSSBQ8NFR3 76 aa4.37□□□□□ -1.71
NEDD9-202ENST00000379446 SERP1Q9Y6X1 66 aa4.37□□□□□ -1.71
NEDD9-202ENST00000379446 NF1P21359 2839 aa4.36□□□□□ -1.71
NEDD9-202ENST00000379446 IGLV5-45A0A087WSX0 123 aa4.36□□□□□ -1.71
NEDD9-202ENST00000379446 TRBV7-6A0A0J9YX20 115 aa4.36□□□□□ -1.71
NEDD9-202ENST00000379446 PRYO14603 147 aa4.36□□□□□ -1.71
NEDD9-202ENST00000379446 PSPHP1O15172 72 aa4.36□□□□□ -1.71
NEDD9-202ENST00000379446 CELSR2Q9HCU4 2923 aa4.36□□□□□ -1.71
NEDD9-202ENST00000379446 TMEM256-PLSCR3K7ERE1 68 aa4.36□□□□□ -1.71
NEDD9-202ENST00000379446 CCKP06307 115 aa4.36□□□□□ -1.71
NEDD9-202ENST00000379446 IGHV6-1A0A0B4J1U7 121 aa4.35□□□□□ -1.71
NEDD9-202ENST00000379446 PDE6GP18545 87 aa4.35□□□□□ -1.71
NEDD9-202ENST00000379446 Q6ZVQ6 151 aa4.35□□□□□ -1.71
NEDD9-202ENST00000379446 LINC00167Q96N53 147 aa4.35□□□□□ -1.71
NEDD9-202ENST00000379446 MXRA5Q9NR99 2828 aa4.35□□□□□ -1.71
NEDD9-202ENST00000379446 C9orf163Q8N9P6 203 aa4.34□□□□□ -1.71
NEDD9-202ENST00000379446 CSNK1G2-AS1Q8NCQ2 148 aa4.34□□□□□ -1.71
NEDD9-202ENST00000379446 Q5XG85 94 aa4.34□□□□□ -1.71
NEDD9-202ENST00000379446 C9orf92A6NGG3 77 aa4.33□□□□□ -1.72
NEDD9-202ENST00000379446 TRAV7A0A075B6U4 112 aa4.33□□□□□ -1.72
NEDD9-202ENST00000379446 COX17Q14061 63 aa4.33□□□□□ -1.72
NEDD9-202ENST00000379446 FAM30AQ9NZY2 134 aa4.33□□□□□ -1.72
NEDD9-202ENST00000379446 SRRM2Q9UQ35 2752 aaKnown RBP4.33□□□□□ -1.72
NEDD9-202ENST00000379446 IGLV7-46A0A075B6I9 117 aa4.33□□□□□ -1.72
NEDD9-202ENST00000379446 IGHV3OR16-9A0A0B4J2B5 98 aa4.32□□□□□ -1.72
NEDD9-202ENST00000379446 BPY2O14599 106 aa4.32□□□□□ -1.72
NEDD9-202ENST00000379446 GIG44P09565 113 aaPredicted RBP4.32□□□□□ -1.72
NEDD9-202ENST00000379446 LINC01547P58512 204 aaPredicted RBP4.31□□□□□ -1.72
NEDD9-202ENST00000379446 WFDC13Q8IUB5 93 aa4.31□□□□□ -1.72
NEDD9-202ENST00000379446 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.31□□□□□ -1.72
NEDD9-202ENST00000379446 PRR26Q8N8Z3 221 aa4.31□□□□□ -1.72
NEDD9-202ENST00000379446 PSORS1C2Q9UIG4 136 aa4.31□□□□□ -1.72
NEDD9-202ENST00000379446 ATP5EP2Q5VTU8 51 aa4.31□□□□□ -1.72
NEDD9-202ENST00000379446 SPAG11AQ6PDA7 123 aa4.3□□□□□ -1.72
NEDD9-202ENST00000379446 BCE1O60756 84 aa4.3□□□□□ -1.72
NEDD9-202ENST00000379446 A0A087WSZ3 146 aa4.29□□□□□ -1.72
NEDD9-202ENST00000379446 H7BZZ5 65 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms