RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 LOC110117498A0A087WWA1 95 aa13.92□□□□□ -0.18
SKI-201ENST00000378536 C9orf163Q8N9P6 203 aa13.92□□□□□ -0.18
SKI-201ENST00000378536 PRR4Q16378 134 aa13.92□□□□□ -0.18
SKI-201ENST00000378536 SPACA4Q8TDM5 124 aa13.91□□□□□ -0.18
SKI-201ENST00000378536 LAMA1P25391 3075 aa13.9□□□□□ -0.18
SKI-201ENST00000378536 CASC10Q5T4H9 136 aa13.89□□□□□ -0.19
SKI-201ENST00000378536 CDIP1Q9H305 208 aa13.89□□□□□ -0.19
SKI-201ENST00000378536 RETNLBQ9BQ08 111 aa13.89□□□□□ -0.19
SKI-201ENST00000378536 UNC79Q9P2D8 2635 aa13.89□□□□□ -0.19
SKI-201ENST00000378536 TYMSOSQ8TAI1 123 aa13.88□□□□□ -0.19
SKI-201ENST00000378536 RPL37AP61513 92 aaKnown RBP13.87□□□□□ -0.19
SKI-201ENST00000378536 PLA2G2DQ9UNK4 145 aa13.86□□□□□ -0.19
SKI-201ENST00000378536 LINC00528Q8N1L1 170 aa13.86□□□□□ -0.19
SKI-201ENST00000378536 COL6A3P12111 3177 aa13.85□□□□□ -0.19
SKI-201ENST00000378536 TRBV7-7A0A0K0K1E9 115 aa13.85□□□□□ -0.19
SKI-201ENST00000378536 PLA2G1BP04054 148 aaKnown RBP13.85□□□□□ -0.19
SKI-201ENST00000378536 CNBPP62633 177 aaKnown RBP13.84□□□□□ -0.19
SKI-201ENST00000378536 V9GYY9 64 aa13.84□□□□□ -0.19
SKI-201ENST00000378536 VCANP13611 3396 aa13.83□□□□□ -0.19
SKI-201ENST00000378536 H0Y9P7 68 aa13.83□□□□□ -0.2
SKI-201ENST00000378536 A0A0U1RQV1 116 aa13.82□□□□□ -0.2
SKI-201ENST00000378536 SPTBN5Q9NRC6 3674 aaKnown RBP13.82□□□□□ -0.2
SKI-201ENST00000378536 K7ERS5 55 aa13.8□□□□□ -0.2
SKI-201ENST00000378536 LINC00336Q6ZUF6 198 aa13.79□□□□□ -0.2
SKI-201ENST00000378536 DNAH14Q0VDD8 3507 aa13.79□□□□□ -0.2
SKI-201ENST00000378536 PRR15LQ9BU68 103 aa13.78□□□□□ -0.2
SKI-201ENST00000378536 TRBV7-4A0A0J9YYF1 115 aa13.77□□□□□ -0.21
SKI-201ENST00000378536 SMIM29Q86T20 159 aa13.77□□□□□ -0.21
SKI-201ENST00000378536 TEP1Q99973 2627 aaKnown RBP13.76□□□□□ -0.21
SKI-201ENST00000378536 PCOTHQ58A44 107 aa13.75□□□□□ -0.21
SKI-201ENST00000378536 ZNF861PO60384 105 aa13.75□□□□□ -0.21
SKI-201ENST00000378536 A0A1W2PNN7 141 aa13.75□□□□□ -0.21
SKI-201ENST00000378536 hDV103S1A0JD37 113 aa13.74□□□□□ -0.21
SKI-201ENST00000378536 TMEM254Q8TBM7 123 aa13.73□□□□□ -0.21
SKI-201ENST00000378536 FAM104AQ969W3 186 aa13.71□□□□□ -0.21
SKI-201ENST00000378536 TP53AIP1Q9HCN2 124 aa13.68□□□□□ -0.22
SKI-201ENST00000378536 A6NED7 52 aa13.68□□□□□ -0.22
SKI-201ENST00000378536 SERP1Q9Y6X1 66 aa13.68□□□□□ -0.22
SKI-201ENST00000378536 CELSR3Q9NYQ7 3312 aa13.67□□□□□ -0.22
SKI-201ENST00000378536 C1orf64Q8NEQ6 169 aa13.66□□□□□ -0.22
SKI-201ENST00000378536 CHD6Q8TD26 2715 aa13.66□□□□□ -0.22
SKI-201ENST00000378536 BAHCC1Q9P281 2608 aa13.66□□□□□ -0.22
SKI-201ENST00000378536 Q8N377 158 aa13.65□□□□□ -0.22
SKI-201ENST00000378536 LINC00313P59037 77 aa13.65□□□□□ -0.22
SKI-201ENST00000378536 IGFL1Q6UW32 110 aa13.64□□□□□ -0.23
SKI-201ENST00000378536 PSORS1C2Q9UIG4 136 aa13.64□□□□□ -0.23
SKI-201ENST00000378536 IGKV2D-30A0A075B6S6 120 aa13.63□□□□□ -0.23
SKI-201ENST00000378536 IGKV2-30P06310 120 aa13.63□□□□□ -0.23
SKI-201ENST00000378536 SMR3BP02814 79 aaPredicted RBP13.63□□□□□ -0.23
SKI-201ENST00000378536 IGLV7-43P04211 117 aa13.62□□□□□ -0.23
SKI-201ENST00000378536 IGLV5-37A0A075B6J1 123 aa13.62□□□□□ -0.23
SKI-201ENST00000378536 TEX15Q9BXT5 2789 aa13.62□□□□□ -0.23
SKI-201ENST00000378536 TNP2Q05952 138 aa13.61□□□□□ -0.23
SKI-201ENST00000378536 SMIM26A0A096LP01 95 aa13.6□□□□□ -0.23
SKI-201ENST00000378536 SSBP3-AS1Q7Z2R9 100 aa13.59□□□□□ -0.23
SKI-201ENST00000378536 FRYQ5TBA9 3013 aa13.59□□□□□ -0.23
SKI-201ENST00000378536 MAP1AP78559 2803 aaPredicted RBP13.59□□□□□ -0.23
SKI-201ENST00000378536 A8MWP4 228 aa13.57□□□□□ -0.24
SKI-201ENST00000378536 FRYLO94915 3013 aa13.56□□□□□ -0.24
SKI-201ENST00000378536 COL6A5A8TX70 2615 aa13.56□□□□□ -0.24
SKI-201ENST00000378536 FLNCQ14315 2725 aa13.55□□□□□ -0.24
SKI-201ENST00000378536 C1orf195Q5TG92 126 aa13.55□□□□□ -0.24
SKI-201ENST00000378536 REV3LO60673 3130 aa13.55□□□□□ -0.24
SKI-201ENST00000378536 DMXL2Q8TDJ6 3036 aa13.55□□□□□ -0.24
SKI-201ENST00000378536 ERC2-IT1O76042 136 aa13.54□□□□□ -0.24
SKI-201ENST00000378536 LINC00304Q8N9R0 145 aa13.53□□□□□ -0.24
SKI-201ENST00000378536 J3QL48 77 aa13.53□□□□□ -0.24
SKI-201ENST00000378536 C8orf87E5RJ46 101 aa13.52□□□□□ -0.25
SKI-201ENST00000378536 ATMQ13315 3056 aa13.52□□□□□ -0.25
SKI-201ENST00000378536 SPRR4Q96PI1 79 aa13.52□□□□□ -0.25
SKI-201ENST00000378536 Q96NJ1 140 aa13.51□□□□□ -0.25
SKI-201ENST00000378536 ANAPC11Q9NYG5 84 aa13.51□□□□□ -0.25
SKI-201ENST00000378536 SPINK1P00995 79 aa13.51□□□□□ -0.25
SKI-201ENST00000378536 K7EQZ3 153 aa13.5□□□□□ -0.25
SKI-201ENST00000378536 SPAG11AQ6PDA7 123 aa13.5□□□□□ -0.25
SKI-201ENST00000378536 EYSQ5T1H1 3165 aa13.49□□□□□ -0.25
SKI-201ENST00000378536 BOD1L1Q8NFC6 3051 aa13.48□□□□□ -0.25
SKI-201ENST00000378536 STAB1Q9NY15 2570 aa13.47□□□□□ -0.25
SKI-201ENST00000378536 A0A0G2JQZ4 141 aa13.47□□□□□ -0.25
SKI-201ENST00000378536 TRAV22A0A0B4J277 110 aa13.47□□□□□ -0.25
SKI-201ENST00000378536 SETXQ7Z333 2677 aaKnown RBP13.47□□□□□ -0.25
SKI-201ENST00000378536 H3BPC8 53 aa13.46□□□□□ -0.26
SKI-201ENST00000378536 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.45□□□□□ -0.26
SKI-201ENST00000378536 C7orf65Q6ZTY9 151 aa13.44□□□□□ -0.26
SKI-201ENST00000378536 MRPL34Q9BQ48 92 aaKnown RBP13.43□□□□□ -0.26
SKI-201ENST00000378536 COL12A1Q99715 3063 aa13.4□□□□□ -0.26
SKI-201ENST00000378536 ATP11AUNQ6ZP68 121 aa13.39□□□□□ -0.27
SKI-201ENST00000378536 PRR15Q8IV56 129 aa13.38□□□□□ -0.27
SKI-201ENST00000378536 PMAIP1Q13794 54 aa13.38□□□□□ -0.27
SKI-201ENST00000378536 GCN1Q92616 2671 aaKnown RBP13.37□□□□□ -0.27
SKI-201ENST00000378536 DMXL1Q9Y485 3027 aa13.36□□□□□ -0.27
SKI-201ENST00000378536 C8orf17Q9NRJ1 99 aa13.36□□□□□ -0.27
SKI-201ENST00000378536 KRTAP1-5Q9BYS1 174 aa13.36□□□□□ -0.27
SKI-201ENST00000378536 DSCR10P59022 87 aa13.35□□□□□ -0.27
SKI-201ENST00000378536 A0A1B0GVX0 72 aa13.35□□□□□ -0.27
SKI-201ENST00000378536 A0A1W2PNM2 257 aa13.34□□□□□ -0.27
SKI-201ENST00000378536 ADGRG4Q8IZF6 3080 aa13.33□□□□□ -0.28
SKI-201ENST00000378536 ACYP2P14621 99 aa13.33□□□□□ -0.28
SKI-201ENST00000378536 IGLV5-48A0A075B6I7 105 aa13.33□□□□□ -0.28
SKI-201ENST00000378536 LOC101927531A0A1B0GV80 90 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms