RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 CR1P17927 2039 aa8.92□□□□□ -0.98
NPHP4-203ENST00000378169 MDFIQ99750 246 aa8.91□□□□□ -0.98
NPHP4-203ENST00000378169 PRYO14603 147 aa8.9□□□□□ -0.98
NPHP4-203ENST00000378169 Q9BRP9 147 aa8.9□□□□□ -0.98
NPHP4-203ENST00000378169 IGLV5-52A0A0A0MRZ9 124 aa8.9□□□□□ -0.99
NPHP4-203ENST00000378169 F8WDY8 70 aa8.9□□□□□ -0.99
NPHP4-203ENST00000378169 MPLKIPQ8TAP9 179 aa8.89□□□□□ -0.99
NPHP4-203ENST00000378169 KIAA0087Q14695 138 aa8.89□□□□□ -0.99
NPHP4-203ENST00000378169 CHKB-CPT1BH3BT56 60 aa8.88□□□□□ -0.99
NPHP4-203ENST00000378169 LINC01547P58512 204 aaPredicted RBP8.88□□□□□ -0.99
NPHP4-203ENST00000378169 Q6ZRP5 223 aa8.88□□□□□ -0.99
NPHP4-203ENST00000378169 APCP25054 2843 aa8.88□□□□□ -0.99
NPHP4-203ENST00000378169 CSMD1Q96PZ7 3565 aa8.87□□□□□ -0.99
NPHP4-203ENST00000378169 ZNF706Q9Y5V0 76 aaPredicted RBP8.87□□□□□ -0.99
NPHP4-203ENST00000378169 SMCR5Q8TEV8 140 aa8.87□□□□□ -0.99
NPHP4-203ENST00000378169 C1orf134Q5TEV5 83 aa8.86□□□□□ -0.99
NPHP4-203ENST00000378169 LINC00612Q8N6U2 182 aa8.85□□□□□ -0.99
NPHP4-203ENST00000378169 CIRBP-AS1Q8TBR5 109 aa8.85□□□□□ -0.99
NPHP4-203ENST00000378169 TRAV7A0A075B6U4 112 aa8.84□□□□□ -0.99
NPHP4-203ENST00000378169 TRBV7-7A0A0K0K1E9 115 aa8.84□□□□□ -0.99
NPHP4-203ENST00000378169 K7EIL1 84 aa8.84□□□□□ -0.99
NPHP4-203ENST00000378169 NHLRC4P0CG21 123 aaPredicted RBP8.84□□□□□ -0.99
NPHP4-203ENST00000378169 CHTF8P0CG12 524 aa8.84□□□□□ -0.99
NPHP4-203ENST00000378169 CELSR1Q9NYQ6 3014 aa8.83□□□□□ -1
NPHP4-203ENST00000378169 ELOF1P60002 83 aaKnown RBP8.83□□□□□ -1
NPHP4-203ENST00000378169 SVEP1Q4LDE5 3571 aa8.83□□□□□ -1
NPHP4-203ENST00000378169 PRR34Q9NV39 138 aa8.82□□□□□ -1
NPHP4-203ENST00000378169 SPENQ96T58 3664 aaKnown RBP8.82□□□□□ -1
NPHP4-203ENST00000378169 VPREB1P12018 145 aa8.82□□□□□ -1
NPHP4-203ENST00000378169 FAM168BA1KXE4 195 aa8.82□□□□□ -1
NPHP4-203ENST00000378169 DNAH10OSP0CZ25 163 aa8.81□□□□□ -1
NPHP4-203ENST00000378169 GVQW2A0A096LPI5 108 aaPredicted RBP8.81□□□□□ -1
NPHP4-203ENST00000378169 ST20-AS1Q8NBB2 130 aa8.81□□□□□ -1
NPHP4-203ENST00000378169 LINC00208Q96KT6 92 aa8.81□□□□□ -1
NPHP4-203ENST00000378169 PHF5AQ7RTV0 110 aaKnown RBP8.8□□□□□ -1
NPHP4-203ENST00000378169 MXRA5Q9NR99 2828 aa8.8□□□□□ -1
NPHP4-203ENST00000378169 NDUFC1O43677 76 aa8.79□□□□□ -1
NPHP4-203ENST00000378169 SERTAD4-AS1Q5TG53 156 aa8.78□□□□□ -1
NPHP4-203ENST00000378169 BRK1Q8WUW1 75 aa8.78□□□□□ -1
NPHP4-203ENST00000378169 HIVEP1P15822 2718 aa8.78□□□□□ -1
NPHP4-203ENST00000378169 IGLV6-57P01721 117 aa8.78□□□□□ -1
NPHP4-203ENST00000378169 Q6ZRX8 168 aa8.78□□□□□ -1
NPHP4-203ENST00000378169 IGHV6-1A0A0B4J1U7 121 aa8.78□□□□□ -1
NPHP4-203ENST00000378169 Q6ZQT0 140 aa8.77□□□□□ -1.01
NPHP4-203ENST00000378169 FAM104AQ969W3 186 aa8.77□□□□□ -1.01
NPHP4-203ENST00000378169 NBDYA0A0U1RRE5 68 aa8.77□□□□□ -1.01
NPHP4-203ENST00000378169 C15orf56Q8N910 161 aa8.76□□□□□ -1.01
NPHP4-203ENST00000378169 CASC2Q6XLA1 102 aa8.75□□□□□ -1.01
NPHP4-203ENST00000378169 STAB2Q8WWQ8 2551 aa8.74□□□□□ -1.01
NPHP4-203ENST00000378169 CUBNO60494 3623 aa8.74□□□□□ -1.01
NPHP4-203ENST00000378169 TMEM254Q8TBM7 123 aa8.74□□□□□ -1.01
NPHP4-203ENST00000378169 TRBV7-6A0A0J9YX20 115 aa8.73□□□□□ -1.01
NPHP4-203ENST00000378169 CXCL6P80162 114 aa8.73□□□□□ -1.01
NPHP4-203ENST00000378169 C16orf90A8MZG2 172 aa8.73□□□□□ -1.01
NPHP4-203ENST00000378169 NIPBLQ6KC79 2804 aaeCLIP8.72□□□□□ -1.01
NPHP4-203ENST00000378169 LINC00476Q8WZB0 136 aa8.72□□□□□ -1.01
NPHP4-203ENST00000378169 CASC10Q5T4H9 136 aa8.71□□□□□ -1.01
NPHP4-203ENST00000378169 EPM2AB3EWF7 344 aa8.71□□□□□ -1.02
NPHP4-203ENST00000378169 C9orf129Q5T035 196 aaKnown RBP8.71□□□□□ -1.02
NPHP4-203ENST00000378169 Q8NBF4 154 aa8.7□□□□□ -1.02
NPHP4-203ENST00000378169 SMIM29Q86T20 159 aa8.7□□□□□ -1.02
NPHP4-203ENST00000378169 HCG22E2RYF7 251 aa8.69□□□□□ -1.02
NPHP4-203ENST00000378169 MOBPQ13875 183 aa8.69□□□□□ -1.02
NPHP4-203ENST00000378169 BSNQ9UPA5 3926 aa8.69□□□□□ -1.02
NPHP4-203ENST00000378169 PCOTHQ58A44 107 aa8.69□□□□□ -1.02
NPHP4-203ENST00000378169 LINC00528Q8N1L1 170 aa8.69□□□□□ -1.02
NPHP4-203ENST00000378169 LOC110117498A0A087WWA1 95 aa8.69□□□□□ -1.02
NPHP4-203ENST00000378169 KMT2BQ9UMN6 2715 aaPredicted RBP8.68□□□□□ -1.02
NPHP4-203ENST00000378169 RETNLBQ9BQ08 111 aa8.68□□□□□ -1.02
NPHP4-203ENST00000378169 RTL8CO15255 209 aa8.67□□□□□ -1.02
NPHP4-203ENST00000378169 ATP5EP56381 51 aaPredicted RBP8.67□□□□□ -1.02
NPHP4-203ENST00000378169 SPTSSBQ8NFR3 76 aa8.66□□□□□ -1.02
NPHP4-203ENST00000378169 TM2D3Q9BRN9 247 aa8.66□□□□□ -1.02
NPHP4-203ENST00000378169 KCNQ1DNQ9H478 68 aa8.66□□□□□ -1.02
NPHP4-203ENST00000378169 IGLV1-50A0A075B6I6 118 aa8.65□□□□□ -1.02
NPHP4-203ENST00000378169 A0A0G2JQZ4 141 aa8.64□□□□□ -1.03
NPHP4-203ENST00000378169 A0A1W2PNN7 141 aa8.64□□□□□ -1.03
NPHP4-203ENST00000378169 A0A0U1RQV1 116 aa8.64□□□□□ -1.03
NPHP4-203ENST00000378169 H0Y9P7 68 aa8.64□□□□□ -1.03
NPHP4-203ENST00000378169 SMIM26A0A096LP01 95 aa8.62□□□□□ -1.03
NPHP4-203ENST00000378169 RPL37AP61513 92 aaKnown RBP8.62□□□□□ -1.03
NPHP4-203ENST00000378169 CRYGAP11844 174 aa8.61□□□□□ -1.03
NPHP4-203ENST00000378169 SERP1Q9Y6X1 66 aa8.61□□□□□ -1.03
NPHP4-203ENST00000378169 Q8N377 158 aa8.6□□□□□ -1.03
NPHP4-203ENST00000378169 BCE1O60756 84 aa8.58□□□□□ -1.04
NPHP4-203ENST00000378169 SEC61GP60059 68 aa8.58□□□□□ -1.04
NPHP4-203ENST00000378169 SPACA4Q8TDM5 124 aa8.58□□□□□ -1.04
NPHP4-203ENST00000378169 ERC2-IT1O76042 136 aa8.56□□□□□ -1.04
NPHP4-203ENST00000378169 C1orf64Q8NEQ6 169 aa8.56□□□□□ -1.04
NPHP4-203ENST00000378169 TENM4Q6N022 2769 aa8.56□□□□□ -1.04
NPHP4-203ENST00000378169 C9orf163Q8N9P6 203 aa8.55□□□□□ -1.04
NPHP4-203ENST00000378169 K7EQZ3 153 aa8.55□□□□□ -1.04
NPHP4-203ENST00000378169 A6NED7 52 aa8.54□□□□□ -1.04
NPHP4-203ENST00000378169 TRBV7-4A0A0J9YYF1 115 aa8.54□□□□□ -1.04
NPHP4-203ENST00000378169 A0A1B0GW54 56 aa8.54□□□□□ -1.04
NPHP4-203ENST00000378169 hDV103S1A0JD37 113 aa8.54□□□□□ -1.04
NPHP4-203ENST00000378169 WWC2-AS2Q96NR7 200 aa8.53□□□□□ -1.04
NPHP4-203ENST00000378169 PSPHP1O15172 72 aa8.53□□□□□ -1.04
NPHP4-203ENST00000378169 WIPF1O43516 503 aa8.53□□□□□ -1.04
NPHP4-203ENST00000378169 TLX1NBP0CAT3 122 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms