RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 KRTAP10-3P60369 221 aa10.44□□□□□ -0.74
CKAP4-201ENST00000378026 UBR5O95071 2799 aaPredicted RBP10.44□□□□□ -0.74
CKAP4-201ENST00000378026 WFDC10BQ8IUB3 73 aa10.44□□□□□ -0.74
CKAP4-201ENST00000378026 F8P00451 2351 aa10.44□□□□□ -0.74
CKAP4-201ENST00000378026 Q6ZRP5 223 aa10.42□□□□□ -0.74
CKAP4-201ENST00000378026 Q8N377 158 aa10.42□□□□□ -0.74
CKAP4-201ENST00000378026 KPRPQ5T749 579 aaPredicted RBP10.42□□□□□ -0.74
CKAP4-201ENST00000378026 PKD1L1Q8TDX9 2849 aa10.42□□□□□ -0.74
CKAP4-201ENST00000378026 HIVEP1P15822 2718 aa10.41□□□□□ -0.74
CKAP4-201ENST00000378026 SPART-AS1P0CW21 52 aa10.41□□□□□ -0.74
CKAP4-201ENST00000378026 EGFEM1PQ0D2K5 195 aa10.41□□□□□ -0.74
CKAP4-201ENST00000378026 V9GYY9 64 aa10.4□□□□□ -0.74
CKAP4-201ENST00000378026 Q8NAQ8 132 aa10.39□□□□□ -0.75
CKAP4-201ENST00000378026 RPL37AP8A6NKH3 93 aa10.39□□□□□ -0.75
CKAP4-201ENST00000378026 NKAPP1Q8N9T2 125 aa10.39□□□□□ -0.75
CKAP4-201ENST00000378026 TENM1Q9UKZ4 2725 aa10.38□□□□□ -0.75
CKAP4-201ENST00000378026 PSPHP1O15172 72 aa10.38□□□□□ -0.75
CKAP4-201ENST00000378026 C1orf64Q8NEQ6 169 aa10.38□□□□□ -0.75
CKAP4-201ENST00000378026 PDZD2O15018 2839 aa10.38□□□□□ -0.75
CKAP4-201ENST00000378026 A0A1W2PNM2 257 aa10.37□□□□□ -0.75
CKAP4-201ENST00000378026 C15orf56Q8N910 161 aa10.37□□□□□ -0.75
CKAP4-201ENST00000378026 TEP1Q99973 2627 aaKnown RBP10.37□□□□□ -0.75
CKAP4-201ENST00000378026 APOC4P55056 127 aa10.37□□□□□ -0.75
CKAP4-201ENST00000378026 SERTAD4-AS1Q5TG53 156 aa10.37□□□□□ -0.75
CKAP4-201ENST00000378026 hDV103S1A0JD37 113 aa10.36□□□□□ -0.75
CKAP4-201ENST00000378026 ST20-AS1Q8NBB2 130 aa10.36□□□□□ -0.75
CKAP4-201ENST00000378026 ANK3Q12955 4377 aaKnown RBP10.36□□□□□ -0.75
CKAP4-201ENST00000378026 C1orf137Q5JT78 98 aa10.35□□□□□ -0.75
CKAP4-201ENST00000378026 C7orf33Q8WU49 177 aa10.35□□□□□ -0.75
CKAP4-201ENST00000378026 IGKV2D-24A0A075B6R9 120 aa10.35□□□□□ -0.75
CKAP4-201ENST00000378026 ATRQ13535 2644 aa10.34□□□□□ -0.75
CKAP4-201ENST00000378026 K7EQZ3 153 aa10.34□□□□□ -0.75
CKAP4-201ENST00000378026 KRTAP1-1Q07627 177 aa10.34□□□□□ -0.75
CKAP4-201ENST00000378026 TRRAPQ9Y4A5 3859 aa10.33□□□□□ -0.76
CKAP4-201ENST00000378026 A0A0G2JQZ4 141 aa10.33□□□□□ -0.76
CKAP4-201ENST00000378026 A0A1W2PNN7 141 aa10.33□□□□□ -0.76
CKAP4-201ENST00000378026 F8WDY8 70 aa10.33□□□□□ -0.76
CKAP4-201ENST00000378026 SMR3AQ99954 134 aa10.33□□□□□ -0.76
CKAP4-201ENST00000378026 DEFB116Q30KQ4 102 aa10.32□□□□□ -0.76
CKAP4-201ENST00000378026 TENM4Q6N022 2769 aa10.32□□□□□ -0.76
CKAP4-201ENST00000378026 IGLV5-48A0A075B6I7 105 aa10.32□□□□□ -0.76
CKAP4-201ENST00000378026 FASNP49327 2511 aaKnown RBP10.32□□□□□ -0.76
CKAP4-201ENST00000378026 SEC61GP60059 68 aa10.31□□□□□ -0.76
CKAP4-201ENST00000378026 KRTAP26-1Q6PEX3 210 aa10.31□□□□□ -0.76
CKAP4-201ENST00000378026 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.3□□□□□ -0.76
CKAP4-201ENST00000378026 FAM168BA1KXE4 195 aa10.3□□□□□ -0.76
CKAP4-201ENST00000378026 DSCR10P59022 87 aa10.3□□□□□ -0.76
CKAP4-201ENST00000378026 SYCNQ0VAF6 134 aa10.3□□□□□ -0.76
CKAP4-201ENST00000378026 KCNQ1DNQ9H478 68 aa10.3□□□□□ -0.76
CKAP4-201ENST00000378026 HELZ2Q9BYK8 2649 aaKnown RBP10.3□□□□□ -0.76
CKAP4-201ENST00000378026 ETDCA0A1B0GVM5 59 aa10.3□□□□□ -0.76
CKAP4-201ENST00000378026 Q9BRP9 147 aa10.3□□□□□ -0.76
CKAP4-201ENST00000378026 BAHCC1Q9P281 2608 aa10.28□□□□□ -0.76
CKAP4-201ENST00000378026 Q8NBF4 154 aa10.27□□□□□ -0.77
CKAP4-201ENST00000378026 WFDC13Q8IUB5 93 aa10.26□□□□□ -0.77
CKAP4-201ENST00000378026 RETNQ9HD89 108 aa10.26□□□□□ -0.77
CKAP4-201ENST00000378026 Q6ZRX8 168 aa10.26□□□□□ -0.77
CKAP4-201ENST00000378026 TRAV22A0A0B4J277 110 aa10.25□□□□□ -0.77
CKAP4-201ENST00000378026 UBE2BP63146 152 aa10.24□□□□□ -0.77
CKAP4-201ENST00000378026 ZCCHC13Q8WW36 166 aaKnown RBP10.24□□□□□ -0.77
CKAP4-201ENST00000378026 DHRS4-AS1Q9P1J3 65 aa10.24□□□□□ -0.77
CKAP4-201ENST00000378026 HECTD1Q9ULT8 2610 aa10.23□□□□□ -0.77
CKAP4-201ENST00000378026 Q1T7F1 81 aa10.23□□□□□ -0.77
CKAP4-201ENST00000378026 LCE6AA0A183 80 aa10.23□□□□□ -0.77
CKAP4-201ENST00000378026 A8MUN3 132 aa10.22□□□□□ -0.77
CKAP4-201ENST00000378026 HCG22E2RYF7 251 aa10.22□□□□□ -0.77
CKAP4-201ENST00000378026 A8MU10 97 aa10.21□□□□□ -0.77
CKAP4-201ENST00000378026 TNP2Q05952 138 aa10.21□□□□□ -0.78
CKAP4-201ENST00000378026 PRR15Q8IV56 129 aa10.21□□□□□ -0.78
CKAP4-201ENST00000378026 PSCAO43653 123 aa10.2□□□□□ -0.78
CKAP4-201ENST00000378026 PMAIP1Q13794 54 aa10.2□□□□□ -0.78
CKAP4-201ENST00000378026 OTOGQ6ZRI0 2925 aa10.2□□□□□ -0.78
CKAP4-201ENST00000378026 IGLV1-50A0A075B6I6 118 aa10.18□□□□□ -0.78
CKAP4-201ENST00000378026 RPL37AP61513 92 aaKnown RBP10.18□□□□□ -0.78
CKAP4-201ENST00000378026 LINC00208Q96KT6 92 aa10.18□□□□□ -0.78
CKAP4-201ENST00000378026 SPRR4Q96PI1 79 aa10.18□□□□□ -0.78
CKAP4-201ENST00000378026 KRTAP4-16G5E9R7 235 aaPredicted RBP10.16□□□□□ -0.78
CKAP4-201ENST00000378026 LINC00476Q8WZB0 136 aa10.16□□□□□ -0.78
CKAP4-201ENST00000378026 TENM3Q9P273 2699 aa10.16□□□□□ -0.78
CKAP4-201ENST00000378026 CASC10Q5T4H9 136 aa10.15□□□□□ -0.79
CKAP4-201ENST00000378026 A0A1B0GW54 56 aa10.14□□□□□ -0.79
CKAP4-201ENST00000378026 A0A087WSZ3 146 aa10.13□□□□□ -0.79
CKAP4-201ENST00000378026 MP68P56378 58 aa10.13□□□□□ -0.79
CKAP4-201ENST00000378026 KRTAP7-1Q8IUC3 87 aa10.13□□□□□ -0.79
CKAP4-201ENST00000378026 CYP4F30PQ9H0H9 118 aa10.12□□□□□ -0.79
CKAP4-201ENST00000378026 B9D2Q9BPU9 175 aa10.11□□□□□ -0.79
CKAP4-201ENST00000378026 IGFL1Q6UW32 110 aa10.1□□□□□ -0.79
CKAP4-201ENST00000378026 MRPL55Q7Z7F7 128 aaKnown RBP10.1□□□□□ -0.79
CKAP4-201ENST00000378026 SPRR1AP35321 89 aa10.1□□□□□ -0.79
CKAP4-201ENST00000378026 LINC01556Q5JQF7 62 aa10.09□□□□□ -0.79
CKAP4-201ENST00000378026 SRRM2Q9UQ35 2752 aaKnown RBP10.09□□□□□ -0.79
CKAP4-201ENST00000378026 NDUFB1O75438 58 aa10.09□□□□□ -0.79
CKAP4-201ENST00000378026 PRLHP81277 87 aa10.08□□□□□ -0.8
CKAP4-201ENST00000378026 CHKB-CPT1BH3BT56 60 aa10.08□□□□□ -0.8
CKAP4-201ENST00000378026 DEFB131BA0A096LNP1 70 aa10.07□□□□□ -0.8
CKAP4-201ENST00000378026 Q5VV11 94 aa10.07□□□□□ -0.8
CKAP4-201ENST00000378026 REG3GQ6UW15 175 aa10.06□□□□□ -0.8
CKAP4-201ENST00000378026 H0Y9P7 68 aa10.05□□□□□ -0.8
CKAP4-201ENST00000378026 OXLD1Q5BKU9 147 aa10.05□□□□□ -0.8
CKAP4-201ENST00000378026 FLNBO75369 2602 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms