RNA–Protein interactions for RNA: ENST00000377038.7

DFFA-202, Transcript of DNA fragmentation factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DFFA, Length 6,032 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-202ENST00000377038 VPS13AQ96RL7 3174 aa8.74□□□□□ -1.01
DFFA-202ENST00000377038 WIPF1O43516 503 aa8.74□□□□□ -1.01
DFFA-202ENST00000377038 ZNF575Q86XF7 245 aa8.74□□□□□ -1.01
DFFA-202ENST00000377038 C9orf163Q8N9P6 203 aa8.73□□□□□ -1.01
DFFA-202ENST00000377038 CDIP1Q9H305 208 aa8.73□□□□□ -1.01
DFFA-202ENST00000377038 PRR15LQ9BU68 103 aa8.73□□□□□ -1.01
DFFA-202ENST00000377038 LOC110117498A0A087WWA1 95 aa8.72□□□□□ -1.01
DFFA-202ENST00000377038 SMIM29Q86T20 159 aa8.71□□□□□ -1.01
DFFA-202ENST00000377038 BRK1Q8WUW1 75 aa8.71□□□□□ -1.02
DFFA-202ENST00000377038 SERP1Q9Y6X1 66 aa8.71□□□□□ -1.02
DFFA-202ENST00000377038 TEP1Q99973 2627 aaKnown RBP8.7□□□□□ -1.02
DFFA-202ENST00000377038 A0A1B0GW54 56 aa8.7□□□□□ -1.02
DFFA-202ENST00000377038 TLX1NBP0CAT3 122 aa8.7□□□□□ -1.02
DFFA-202ENST00000377038 LINC00528Q8N1L1 170 aa8.69□□□□□ -1.02
DFFA-202ENST00000377038 SPTSSBQ8NFR3 76 aa8.69□□□□□ -1.02
DFFA-202ENST00000377038 hDV103S1A0JD37 113 aa8.69□□□□□ -1.02
DFFA-202ENST00000377038 IGKV2D-30A0A075B6S6 120 aa8.68□□□□□ -1.02
DFFA-202ENST00000377038 IGKV2-30P06310 120 aa8.68□□□□□ -1.02
DFFA-202ENST00000377038 TRBV7-7A0A0K0K1E9 115 aa8.68□□□□□ -1.02
DFFA-202ENST00000377038 SMR3BP02814 79 aaPredicted RBP8.67□□□□□ -1.02
DFFA-202ENST00000377038 TMEM254Q8TBM7 123 aa8.67□□□□□ -1.02
DFFA-202ENST00000377038 V9GYY9 64 aa8.67□□□□□ -1.02
DFFA-202ENST00000377038 TNRC18O15417 2968 aaPredicted RBP8.67□□□□□ -1.02
DFFA-202ENST00000377038 A0A1W2PNN7 141 aa8.66□□□□□ -1.02
DFFA-202ENST00000377038 LAMA1P25391 3075 aa8.66□□□□□ -1.02
DFFA-202ENST00000377038 CNBPP62633 177 aaKnown RBP8.66□□□□□ -1.02
DFFA-202ENST00000377038 LINC00336Q6ZUF6 198 aa8.66□□□□□ -1.02
DFFA-202ENST00000377038 VCANP13611 3396 aa8.65□□□□□ -1.02
DFFA-202ENST00000377038 UNC79Q9P2D8 2635 aa8.65□□□□□ -1.02
DFFA-202ENST00000377038 SPINK1P00995 79 aa8.65□□□□□ -1.02
DFFA-202ENST00000377038 C1orf64Q8NEQ6 169 aa8.65□□□□□ -1.02
DFFA-202ENST00000377038 ZNF861PO60384 105 aa8.65□□□□□ -1.02
DFFA-202ENST00000377038 PLA2G2DQ9UNK4 145 aa8.65□□□□□ -1.02
DFFA-202ENST00000377038 COL6A3P12111 3177 aa8.65□□□□□ -1.03
DFFA-202ENST00000377038 TRBV7-4A0A0J9YYF1 115 aa8.64□□□□□ -1.03
DFFA-202ENST00000377038 K7ERS5 55 aa8.63□□□□□ -1.03
DFFA-202ENST00000377038 LINC00313P59037 77 aa8.63□□□□□ -1.03
DFFA-202ENST00000377038 DNAH14Q0VDD8 3507 aa8.63□□□□□ -1.03
DFFA-202ENST00000377038 J3QL48 77 aa8.63□□□□□ -1.03
DFFA-202ENST00000377038 CELSR3Q9NYQ7 3312 aa8.61□□□□□ -1.03
DFFA-202ENST00000377038 TP53AIP1Q9HCN2 124 aa8.61□□□□□ -1.03
DFFA-202ENST00000377038 PSORS1C2Q9UIG4 136 aa8.6□□□□□ -1.03
DFFA-202ENST00000377038 A6NED7 52 aa8.59□□□□□ -1.03
DFFA-202ENST00000377038 IGFL1Q6UW32 110 aa8.59□□□□□ -1.03
DFFA-202ENST00000377038 TNP2Q05952 138 aa8.59□□□□□ -1.03
DFFA-202ENST00000377038 TEX15Q9BXT5 2789 aa8.58□□□□□ -1.04
DFFA-202ENST00000377038 Q8N377 158 aa8.58□□□□□ -1.04
DFFA-202ENST00000377038 ANAPC11Q9NYG5 84 aa8.58□□□□□ -1.04
DFFA-202ENST00000377038 BAHCC1Q9P281 2608 aa8.58□□□□□ -1.04
DFFA-202ENST00000377038 IGLV7-43P04211 117 aa8.58□□□□□ -1.04
DFFA-202ENST00000377038 Q96NJ1 140 aa8.58□□□□□ -1.04
DFFA-202ENST00000377038 SPTBN5Q9NRC6 3674 aaKnown RBP8.58□□□□□ -1.04
DFFA-202ENST00000377038 A0A0G2JQZ4 141 aa8.56□□□□□ -1.04
DFFA-202ENST00000377038 C7orf65Q6ZTY9 151 aa8.55□□□□□ -1.04
DFFA-202ENST00000377038 LINC00304Q8N9R0 145 aa8.55□□□□□ -1.04
DFFA-202ENST00000377038 MAP1AP78559 2803 aaPredicted RBP8.55□□□□□ -1.04
DFFA-202ENST00000377038 FAM104AQ969W3 186 aa8.55□□□□□ -1.04
DFFA-202ENST00000377038 A8MWP4 228 aa8.54□□□□□ -1.04
DFFA-202ENST00000377038 SMIM26A0A096LP01 95 aa8.54□□□□□ -1.04
DFFA-202ENST00000377038 K7EQZ3 153 aa8.53□□□□□ -1.04
DFFA-202ENST00000377038 ERC2-IT1O76042 136 aa8.53□□□□□ -1.04
DFFA-202ENST00000377038 SSBP3-AS1Q7Z2R9 100 aa8.53□□□□□ -1.04
DFFA-202ENST00000377038 COL6A5A8TX70 2615 aa8.53□□□□□ -1.04
DFFA-202ENST00000377038 CHD6Q8TD26 2715 aa8.52□□□□□ -1.05
DFFA-202ENST00000377038 FRYQ5TBA9 3013 aa8.51□□□□□ -1.05
DFFA-202ENST00000377038 TRAV22A0A0B4J277 110 aa8.5□□□□□ -1.05
DFFA-202ENST00000377038 C8orf87E5RJ46 101 aa8.5□□□□□ -1.05
DFFA-202ENST00000377038 SPRR4Q96PI1 79 aa8.5□□□□□ -1.05
DFFA-202ENST00000377038 SVIPQ8NHG7 77 aa8.5□□□□□ -1.05
DFFA-202ENST00000377038 IGLV5-37A0A075B6J1 123 aa8.5□□□□□ -1.05
DFFA-202ENST00000377038 ATP11AUNQ6ZP68 121 aa8.49□□□□□ -1.05
DFFA-202ENST00000377038 SPAG11AQ6PDA7 123 aa8.48□□□□□ -1.05
DFFA-202ENST00000377038 STAB1Q9NY15 2570 aa8.48□□□□□ -1.05
DFFA-202ENST00000377038 FRYLO94915 3013 aa8.48□□□□□ -1.05
DFFA-202ENST00000377038 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.48□□□□□ -1.05
DFFA-202ENST00000377038 SETXQ7Z333 2677 aaKnown RBP8.47□□□□□ -1.05
DFFA-202ENST00000377038 DSCR10P59022 87 aa8.47□□□□□ -1.05
DFFA-202ENST00000377038 MRPL34Q9BQ48 92 aaKnown RBP8.47□□□□□ -1.05
DFFA-202ENST00000377038 A0A0U1RQV1 116 aa8.47□□□□□ -1.05
DFFA-202ENST00000377038 ATMQ13315 3056 aa8.45□□□□□ -1.06
DFFA-202ENST00000377038 DMXL2Q8TDJ6 3036 aa8.44□□□□□ -1.06
DFFA-202ENST00000377038 C9orf92A6NGG3 77 aa8.44□□□□□ -1.06
DFFA-202ENST00000377038 H3BPC8 53 aa8.44□□□□□ -1.06
DFFA-202ENST00000377038 PSPHP1O15172 72 aa8.44□□□□□ -1.06
DFFA-202ENST00000377038 BOD1L1Q8NFC6 3051 aa8.43□□□□□ -1.06
DFFA-202ENST00000377038 FLNCQ14315 2725 aa8.43□□□□□ -1.06
DFFA-202ENST00000377038 OBSCN-AS1Q96MR7 158 aa8.43□□□□□ -1.06
DFFA-202ENST00000377038 ACYP2P14621 99 aa8.43□□□□□ -1.06
DFFA-202ENST00000377038 EYSQ5T1H1 3165 aa8.43□□□□□ -1.06
DFFA-202ENST00000377038 PRR15Q8IV56 129 aa8.42□□□□□ -1.06
DFFA-202ENST00000377038 C8orf17Q9NRJ1 99 aa8.42□□□□□ -1.06
DFFA-202ENST00000377038 A0A1B0GVX0 72 aa8.41□□□□□ -1.06
DFFA-202ENST00000377038 A0A1W2PNM2 257 aa8.39□□□□□ -1.07
DFFA-202ENST00000377038 LOC101927531A0A1B0GV80 90 aa8.39□□□□□ -1.07
DFFA-202ENST00000377038 KRTAP1-5Q9BYS1 174 aa8.39□□□□□ -1.07
DFFA-202ENST00000377038 COL12A1Q99715 3063 aa8.39□□□□□ -1.07
DFFA-202ENST00000377038 GCN1Q92616 2671 aaKnown RBP8.38□□□□□ -1.07
DFFA-202ENST00000377038 NOTCH1P46531 2555 aa8.38□□□□□ -1.07
DFFA-202ENST00000377038 REV3LO60673 3130 aa8.37□□□□□ -1.07
DFFA-202ENST00000377038 UBR5O95071 2799 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms