RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 C2orf91Q6ZV80 131 aa7.28□□□□□ -1.24
LSM2-208ENST00000375661 COPS9Q8WXC6 57 aa7.28□□□□□ -1.24
LSM2-208ENST00000375661 KCNQ1DNQ9H478 68 aa7.28□□□□□ -1.24
LSM2-208ENST00000375661 HIGD1BQ9P298 99 aa7.28□□□□□ -1.24
LSM2-208ENST00000375661 RPL13AP40429 203 aaKnown RBP7.27□□□□□ -1.25
LSM2-208ENST00000375661 PRYO14603 147 aa7.26□□□□□ -1.25
LSM2-208ENST00000375661 ZNF861PO60384 105 aa7.26□□□□□ -1.25
LSM2-208ENST00000375661 SPRR1AP35321 89 aa7.26□□□□□ -1.25
LSM2-208ENST00000375661 PRR4Q16378 134 aa7.26□□□□□ -1.25
LSM2-208ENST00000375661 S100A7L2Q5SY68 101 aa7.26□□□□□ -1.25
LSM2-208ENST00000375661 KRTAP13-1Q8IUC0 172 aa7.26□□□□□ -1.25
LSM2-208ENST00000375661 LINC00337Q8N6G1 96 aa7.26□□□□□ -1.25
LSM2-208ENST00000375661 KRTAP1-4P0C5Y4 121 aa7.25□□□□□ -1.25
LSM2-208ENST00000375661 S100A12P80511 92 aa7.25□□□□□ -1.25
LSM2-208ENST00000375661 LINC00518Q8N0U6 118 aa7.25□□□□□ -1.25
LSM2-208ENST00000375661 HIST1H4GQ99525 98 aa7.25□□□□□ -1.25
LSM2-208ENST00000375661 A4D1N5 150 aa7.24□□□□□ -1.25
LSM2-208ENST00000375661 KRTAP4-16G5E9R7 235 aaPredicted RBP7.24□□□□□ -1.25
LSM2-208ENST00000375661 SMIM6P0DI80 62 aa7.24□□□□□ -1.25
LSM2-208ENST00000375661 FAM19A1Q7Z5A9 133 aa7.24□□□□□ -1.25
LSM2-208ENST00000375661 RPL28P46779 137 aaKnown RBP7.23□□□□□ -1.25
LSM2-208ENST00000375661 PRLHP81277 87 aa7.23□□□□□ -1.25
LSM2-208ENST00000375661 OR13C6PQ8NH95 151 aa7.23□□□□□ -1.25
LSM2-208ENST00000375661 TRAV23DV6A0A075B6W5 121 aa7.22□□□□□ -1.25
LSM2-208ENST00000375661 UBE2AP49459 152 aa7.22□□□□□ -1.25
LSM2-208ENST00000375661 UQCR10Q9UDW1 63 aa7.22□□□□□ -1.25
LSM2-208ENST00000375661 A6NDN8 102 aa7.2□□□□□ -1.26
LSM2-208ENST00000375661 B5MCH6 92 aa7.2□□□□□ -1.26
LSM2-208ENST00000375661 ZNF73O43830 326 aaPredicted RBP7.2□□□□□ -1.26
LSM2-208ENST00000375661 TAL2Q16559 108 aa7.2□□□□□ -1.26
LSM2-208ENST00000375661 LCE2AQ5TA79 106 aaPredicted RBP7.2□□□□□ -1.26
LSM2-208ENST00000375661 PRO1933Q9H354 126 aa7.2□□□□□ -1.26
LSM2-208ENST00000375661 MUC2Q02817 5179 aa7.19□□□□□ -1.26
LSM2-208ENST00000375661 TRAV13-2A0A0B4J235 113 aa7.19□□□□□ -1.26
LSM2-208ENST00000375661 ETDCA0A1B0GVM5 59 aa7.19□□□□□ -1.26
LSM2-208ENST00000375661 CEND1Q8N111 149 aa7.19□□□□□ -1.26
LSM2-208ENST00000375661 C12orf57Q99622 126 aa7.19□□□□□ -1.26
LSM2-208ENST00000375661 KRTAP9-6A0A140TA67 174 aa7.17□□□□□ -1.26
LSM2-208ENST00000375661 SMCR5Q8TEV8 140 aa7.17□□□□□ -1.26
LSM2-208ENST00000375661 CBY1Q9Y3M2 126 aa7.17□□□□□ -1.26
LSM2-208ENST00000375661 CFC1BP0CG36 223 aa7.16□□□□□ -1.26
LSM2-208ENST00000375661 CFC1P0CG37 223 aa7.16□□□□□ -1.26
LSM2-208ENST00000375661 FXYD2P54710 66 aa7.16□□□□□ -1.26
LSM2-208ENST00000375661 HSD52Q0P140 79 aa7.16□□□□□ -1.26
LSM2-208ENST00000375661 C6orf99Q4VX62 202 aa7.16□□□□□ -1.26
LSM2-208ENST00000375661 Q6ZRX8 168 aa7.16□□□□□ -1.26
LSM2-208ENST00000375661 Q9BRP9 147 aa7.16□□□□□ -1.26
LSM2-208ENST00000375661 HIGD2AQ9BW72 106 aa7.16□□□□□ -1.26
LSM2-208ENST00000375661 SMIM11BQ8TCY0 68 aa7.15□□□□□ -1.26
LSM2-208ENST00000375661 ERC2-IT1O76042 136 aa7.14□□□□□ -1.27
LSM2-208ENST00000375661 A0A0B4J2C4 111 aa7.13□□□□□ -1.27
LSM2-208ENST00000375661 HINT1P49773 126 aaPredicted RBP7.13□□□□□ -1.27
LSM2-208ENST00000375661 TRBV7-6A0A0J9YX20 115 aa7.12□□□□□ -1.27
LSM2-208ENST00000375661 TSPAN13O95857 204 aa7.12□□□□□ -1.27
LSM2-208ENST00000375661 COX7BP24311 80 aa7.12□□□□□ -1.27
LSM2-208ENST00000375661 ELOF1P60002 83 aaKnown RBP7.12□□□□□ -1.27
LSM2-208ENST00000375661 ANAPC11Q9NYG5 84 aa7.12□□□□□ -1.27
LSM2-208ENST00000375661 TMEM238LA0A1B0GVL6 79 aa7.11□□□□□ -1.27
LSM2-208ENST00000375661 A0A1B0GWB2 263 aa7.11□□□□□ -1.27
LSM2-208ENST00000375661 A6NJY4 79 aa7.11□□□□□ -1.27
LSM2-208ENST00000375661 RAB37Q96AX2 223 aa7.11□□□□□ -1.27
LSM2-208ENST00000375661 SPRR4Q96PI1 79 aa7.11□□□□□ -1.27
LSM2-208ENST00000375661 CTAG1AP78358 180 aa7.1□□□□□ -1.27
LSM2-208ENST00000375661 BVES-AS1Q5T3Y7 98 aa7.1□□□□□ -1.27
LSM2-208ENST00000375661 A0A087X002 238 aa7.09□□□□□ -1.27
LSM2-208ENST00000375661 CRYGAP11844 174 aa7.09□□□□□ -1.27
LSM2-208ENST00000375661 TYMSOSQ8TAI1 123 aa7.09□□□□□ -1.27
LSM2-208ENST00000375661 NHP2Q9NX24 153 aaKnown RBP7.09□□□□□ -1.27
LSM2-208ENST00000375661 DHRS4-AS1Q9P1J3 65 aa7.09□□□□□ -1.27
LSM2-208ENST00000375661 PRO1854Q9UHT4 67 aa7.09□□□□□ -1.27
LSM2-208ENST00000375661 FAT4Q6V0I7 4981 aa7.09□□□□□ -1.28
LSM2-208ENST00000375661 TSTD3H0UI37 97 aa7.08□□□□□ -1.28
LSM2-208ENST00000375661 H7C2G1 150 aa7.08□□□□□ -1.28
LSM2-208ENST00000375661 ST20-AS1Q8NBB2 130 aa7.08□□□□□ -1.28
LSM2-208ENST00000375661 ZNF706Q9Y5V0 76 aaPredicted RBP7.08□□□□□ -1.28
LSM2-208ENST00000375661 K7ERJ3 54 aa7.07□□□□□ -1.28
LSM2-208ENST00000375661 FAM229BQ4G0N7 80 aa7.07□□□□□ -1.28
LSM2-208ENST00000375661 KRTAP13-2Q52LG2 175 aa7.07□□□□□ -1.28
LSM2-208ENST00000375661 VAMP3Q15836 100 aa7.06□□□□□ -1.28
LSM2-208ENST00000375661 LINC00483Q53H64 154 aa7.06□□□□□ -1.28
LSM2-208ENST00000375661 GAGE2AQ6NT46 116 aa7.06□□□□□ -1.28
LSM2-208ENST00000375661 TPRXLQ17RH7 258 aa7.05□□□□□ -1.28
LSM2-208ENST00000375661 Q1RN00 199 aa7.04□□□□□ -1.28
LSM2-208ENST00000375661 LINC00575Q6W349 94 aa7.04□□□□□ -1.28
LSM2-208ENST00000375661 M0R143 59 aa7.03□□□□□ -1.28
LSM2-208ENST00000375661 C3orf22Q8N5N4 141 aa7.03□□□□□ -1.28
LSM2-208ENST00000375661 CDIP1Q9H305 208 aa7.03□□□□□ -1.28
LSM2-208ENST00000375661 SPRR1BP22528 89 aa7.02□□□□□ -1.29
LSM2-208ENST00000375661 LINC01547P58512 204 aaPredicted RBP7.02□□□□□ -1.29
LSM2-208ENST00000375661 TRIAP1O43715 76 aa7.01□□□□□ -1.29
LSM2-208ENST00000375661 LINC00304Q8N9R0 145 aa7.01□□□□□ -1.29
LSM2-208ENST00000375661 hADV29S1A0JD25 119 aa7□□□□□ -1.29
LSM2-208ENST00000375661 H0YGX0 51 aa7□□□□□ -1.29
LSM2-208ENST00000375661 SLC25A20O43772 301 aa7□□□□□ -1.29
LSM2-208ENST00000375661 FAM218AQ96MZ4 157 aa7□□□□□ -1.29
LSM2-208ENST00000375661 IGLV5-48A0A075B6I7 105 aa6.99□□□□□ -1.29
LSM2-208ENST00000375661 IGLV7-46A0A075B6I9 117 aa6.99□□□□□ -1.29
LSM2-208ENST00000375661 DEFB105AQ8NG35 78 aa6.99□□□□□ -1.29
LSM2-208ENST00000375661 RETNLBQ9BQ08 111 aa6.99□□□□□ -1.29
LSM2-208ENST00000375661 TEX49A0A1B0GTD5 131 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms