RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 IGHV4-28A0A0C4DH34 117 aa8.2□□□□□ -1.1
C9orf3-203ENST00000375315 IGKV4-1P06312 121 aa8.2□□□□□ -1.1
C9orf3-203ENST00000375315 Q6ZRP5 223 aa8.19□□□□□ -1.1
C9orf3-203ENST00000375315 APOC4P55056 127 aa8.19□□□□□ -1.1
C9orf3-203ENST00000375315 Q8N9L7 120 aa8.19□□□□□ -1.1
C9orf3-203ENST00000375315 CELA1Q9UNI1 258 aa8.19□□□□□ -1.1
C9orf3-203ENST00000375315 COX7BP24311 80 aa8.18□□□□□ -1.1
C9orf3-203ENST00000375315 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.18□□□□□ -1.1
C9orf3-203ENST00000375315 LRCOL1A6NCL2 159 aa8.18□□□□□ -1.1
C9orf3-203ENST00000375315 PSPHP1O15172 72 aa8.16□□□□□ -1.1
C9orf3-203ENST00000375315 Q8NDZ9 215 aa8.16□□□□□ -1.1
C9orf3-203ENST00000375315 C1orf64Q8NEQ6 169 aa8.16□□□□□ -1.1
C9orf3-203ENST00000375315 C9orf116Q5BN46 136 aaPredicted RBP8.16□□□□□ -1.1
C9orf3-203ENST00000375315 KIAA0087Q14695 138 aa8.15□□□□□ -1.1
C9orf3-203ENST00000375315 DIRC1Q969H9 104 aa8.15□□□□□ -1.1
C9orf3-203ENST00000375315 ANK2Q01484 3957 aa8.15□□□□□ -1.1
C9orf3-203ENST00000375315 IGLV6-57P01721 117 aa8.15□□□□□ -1.11
C9orf3-203ENST00000375315 MRPL55Q7Z7F7 128 aaKnown RBP8.15□□□□□ -1.11
C9orf3-203ENST00000375315 GYPEP15421 78 aa8.14□□□□□ -1.11
C9orf3-203ENST00000375315 CLPSL2Q6UWE3 100 aa8.14□□□□□ -1.11
C9orf3-203ENST00000375315 TRAV22A0A0B4J277 110 aa8.14□□□□□ -1.11
C9orf3-203ENST00000375315 LINC00269Q8N2A0 174 aa8.14□□□□□ -1.11
C9orf3-203ENST00000375315 STAB2Q8WWQ8 2551 aa8.13□□□□□ -1.11
C9orf3-203ENST00000375315 A0A1B0GUV1 79 aa8.12□□□□□ -1.11
C9orf3-203ENST00000375315 FAM30AQ9NZY2 134 aa8.12□□□□□ -1.11
C9orf3-203ENST00000375315 LYRM9A8MSI8 78 aa8.1□□□□□ -1.11
C9orf3-203ENST00000375315 HIGD2BQ4VC39 106 aa8.1□□□□□ -1.11
C9orf3-203ENST00000375315 Q8NAQ8 132 aa8.1□□□□□ -1.11
C9orf3-203ENST00000375315 A0A0J9YWU9 116 aa8.09□□□□□ -1.11
C9orf3-203ENST00000375315 UBE2BP63146 152 aa8.09□□□□□ -1.11
C9orf3-203ENST00000375315 SMIM29Q86T20 159 aa8.09□□□□□ -1.11
C9orf3-203ENST00000375315 LCE6AA0A183 80 aa8.09□□□□□ -1.11
C9orf3-203ENST00000375315 SPART-AS1P0CW21 52 aa8.09□□□□□ -1.11
C9orf3-203ENST00000375315 ZNF73O43830 326 aaPredicted RBP8.08□□□□□ -1.12
C9orf3-203ENST00000375315 CHCHD10Q8WYQ3 142 aaPredicted RBP8.08□□□□□ -1.12
C9orf3-203ENST00000375315 CYP4F30PQ9H0H9 118 aa8.07□□□□□ -1.12
C9orf3-203ENST00000375315 ELOF1P60002 83 aaKnown RBP8.07□□□□□ -1.12
C9orf3-203ENST00000375315 A8MUN3 132 aa8.06□□□□□ -1.12
C9orf3-203ENST00000375315 K7EIL1 84 aa8.06□□□□□ -1.12
C9orf3-203ENST00000375315 SYCNQ0VAF6 134 aa8.06□□□□□ -1.12
C9orf3-203ENST00000375315 PRO0255Q9UI72 69 aa8.06□□□□□ -1.12
C9orf3-203ENST00000375315 PSCAO43653 123 aa8.06□□□□□ -1.12
C9orf3-203ENST00000375315 LINC00612Q8N6U2 182 aa8.06□□□□□ -1.12
C9orf3-203ENST00000375315 EGFEM1PQ0D2K5 195 aa8.05□□□□□ -1.12
C9orf3-203ENST00000375315 UNQ6190/PRO20217Q6UXQ8 127 aa8.05□□□□□ -1.12
C9orf3-203ENST00000375315 KTN1-AS1Q86SY8 53 aa8.05□□□□□ -1.12
C9orf3-203ENST00000375315 KLK12Q9UKR0 248 aa8.05□□□□□ -1.12
C9orf3-203ENST00000375315 IGLV10-54A0A075B6I4 117 aa8.05□□□□□ -1.12
C9orf3-203ENST00000375315 C3orf84H3BNL1 204 aa8.05□□□□□ -1.12
C9orf3-203ENST00000375315 ZCCHC13Q8WW36 166 aaKnown RBP8.05□□□□□ -1.12
C9orf3-203ENST00000375315 SPAG11BQ08648 103 aa8.05□□□□□ -1.12
C9orf3-203ENST00000375315 C10orf25Q5T742 122 aa8.05□□□□□ -1.12
C9orf3-203ENST00000375315 UBE2AP49459 152 aa8.04□□□□□ -1.12
C9orf3-203ENST00000375315 ETDCA0A1B0GVM5 59 aa8.03□□□□□ -1.12
C9orf3-203ENST00000375315 CMYA5Q8N3K9 4069 aa8.03□□□□□ -1.12
C9orf3-203ENST00000375315 TENM2Q9NT68 2774 aa8.03□□□□□ -1.12
C9orf3-203ENST00000375315 RBM12B-AS1Q9P1G2 102 aa8.02□□□□□ -1.13
C9orf3-203ENST00000375315 ANGP03950 147 aaKnown RBP8.02□□□□□ -1.13
C9orf3-203ENST00000375315 PRR4Q16378 134 aa8.02□□□□□ -1.13
C9orf3-203ENST00000375315 LINC00588Q9Y4M8 146 aa8.02□□□□□ -1.13
C9orf3-203ENST00000375315 NDUFB1O75438 58 aa8.01□□□□□ -1.13
C9orf3-203ENST00000375315 REG3AQ06141 175 aa8.01□□□□□ -1.13
C9orf3-203ENST00000375315 Q5VV11 94 aa8.01□□□□□ -1.13
C9orf3-203ENST00000375315 C11orf45Q8TAV5 145 aa8□□□□□ -1.13
C9orf3-203ENST00000375315 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.99□□□□□ -1.13
C9orf3-203ENST00000375315 CHKB-CPT1BH3BT56 60 aa7.99□□□□□ -1.13
C9orf3-203ENST00000375315 COL7A1Q02388 2944 aa7.99□□□□□ -1.13
C9orf3-203ENST00000375315 XAGE1AQ9HD64 81 aa7.99□□□□□ -1.13
C9orf3-203ENST00000375315 DEFB131BA0A096LNP1 70 aa7.98□□□□□ -1.13
C9orf3-203ENST00000375315 A0A1B0GW54 56 aa7.98□□□□□ -1.13
C9orf3-203ENST00000375315 A8MU10 97 aa7.98□□□□□ -1.13
C9orf3-203ENST00000375315 NDUFS5O43920 106 aa7.98□□□□□ -1.13
C9orf3-203ENST00000375315 LINC00528Q8N1L1 170 aa7.98□□□□□ -1.13
C9orf3-203ENST00000375315 KPRPQ5T749 579 aaPredicted RBP7.97□□□□□ -1.13
C9orf3-203ENST00000375315 LIMD2Q9BT23 127 aa7.97□□□□□ -1.13
C9orf3-203ENST00000375315 SPTSSBQ8NFR3 76 aa7.97□□□□□ -1.13
C9orf3-203ENST00000375315 DNHD1Q96M86 4753 aa7.97□□□□□ -1.13
C9orf3-203ENST00000375315 GVQW2A0A096LPI5 108 aaPredicted RBP7.96□□□□□ -1.13
C9orf3-203ENST00000375315 TGP01266 2768 aa7.96□□□□□ -1.13
C9orf3-203ENST00000375315 M0R378 163 aa7.96□□□□□ -1.14
C9orf3-203ENST00000375315 C16orf90A8MZG2 172 aa7.96□□□□□ -1.14
C9orf3-203ENST00000375315 ATP11AUNQ6ZP68 121 aa7.95□□□□□ -1.14
C9orf3-203ENST00000375315 B9D2Q9BPU9 175 aa7.95□□□□□ -1.14
C9orf3-203ENST00000375315 ST20-AS1Q8NBB2 130 aa7.94□□□□□ -1.14
C9orf3-203ENST00000375315 HCG22E2RYF7 251 aa7.93□□□□□ -1.14
C9orf3-203ENST00000375315 VPREB1P12018 145 aa7.93□□□□□ -1.14
C9orf3-203ENST00000375315 WFDC10BQ8IUB3 73 aa7.93□□□□□ -1.14
C9orf3-203ENST00000375315 C6orf48Q9UBA6 75 aa7.93□□□□□ -1.14
C9orf3-203ENST00000375315 IGLV5-48A0A075B6I7 105 aa7.92□□□□□ -1.14
C9orf3-203ENST00000375315 MP68P56378 58 aa7.92□□□□□ -1.14
C9orf3-203ENST00000375315 PRR15LQ9BU68 103 aa7.92□□□□□ -1.14
C9orf3-203ENST00000375315 DEFB105AQ8NG35 78 aa7.92□□□□□ -1.14
C9orf3-203ENST00000375315 Q8N9P0 234 aaPredicted RBP7.92□□□□□ -1.14
C9orf3-203ENST00000375315 PHF5AQ7RTV0 110 aaKnown RBP7.9□□□□□ -1.14
C9orf3-203ENST00000375315 LINC00208Q96KT6 92 aa7.9□□□□□ -1.14
C9orf3-203ENST00000375315 K7EQZ3 153 aa7.89□□□□□ -1.15
C9orf3-203ENST00000375315 DSCR10P59022 87 aa7.89□□□□□ -1.15
C9orf3-203ENST00000375315 A0A1W2PNM2 257 aa7.89□□□□□ -1.15
C9orf3-203ENST00000375315 Q8N377 158 aa7.89□□□□□ -1.15
C9orf3-203ENST00000375315 MEGF8Q7Z7M0 2845 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms