RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 IGLV5-37A0A075B6J1 123 aa10.01□□□□□ -0.81
H2AFX-201ENST00000375167 PCP4L1A6NKN8 68 aa10.01□□□□□ -0.81
H2AFX-201ENST00000375167 TSTD3H0UI37 97 aa10.01□□□□□ -0.81
H2AFX-201ENST00000375167 COX8AP10176 69 aa9.99□□□□□ -0.81
H2AFX-201ENST00000375167 KRTAP10-6P60371 365 aaPredicted RBP9.99□□□□□ -0.81
H2AFX-201ENST00000375167 PCP2Q8IVA1 136 aa9.99□□□□□ -0.81
H2AFX-201ENST00000375167 LOC107984156A0A0G2JMH3 177 aa9.98□□□□□ -0.81
H2AFX-201ENST00000375167 DLEU1O43261 78 aa9.98□□□□□ -0.81
H2AFX-201ENST00000375167 ARL17AQ8IVW1 177 aa9.98□□□□□ -0.81
H2AFX-201ENST00000375167 BOD1L2Q8IYS8 172 aa9.98□□□□□ -0.81
H2AFX-201ENST00000375167 LINC00167Q96N53 147 aa9.98□□□□□ -0.81
H2AFX-201ENST00000375167 IFITM1P13164 125 aa9.97□□□□□ -0.81
H2AFX-201ENST00000375167 SPANXDQ9BXN6 97 aa9.97□□□□□ -0.81
H2AFX-201ENST00000375167 TTTY13Q9BZ97 58 aa9.97□□□□□ -0.81
H2AFX-201ENST00000375167 PRO1933Q9H354 126 aa9.97□□□□□ -0.81
H2AFX-201ENST00000375167 SPANXCQ9NY87 97 aa9.97□□□□□ -0.81
H2AFX-201ENST00000375167 VPREB1P12018 145 aa9.96□□□□□ -0.82
H2AFX-201ENST00000375167 CTAG1AP78358 180 aa9.96□□□□□ -0.82
H2AFX-201ENST00000375167 SLC25A34Q6PIV7 304 aa9.96□□□□□ -0.82
H2AFX-201ENST00000375167 CBY1Q9Y3M2 126 aa9.96□□□□□ -0.82
H2AFX-201ENST00000375167 NDUFC2O95298 119 aa9.95□□□□□ -0.82
H2AFX-201ENST00000375167 GAGE10A6NGK3 116 aa9.94□□□□□ -0.82
H2AFX-201ENST00000375167 RPL37AP8A6NKH3 93 aa9.94□□□□□ -0.82
H2AFX-201ENST00000375167 DDTP30046 118 aa9.94□□□□□ -0.82
H2AFX-201ENST00000375167 KRTAP13-2Q52LG2 175 aa9.94□□□□□ -0.82
H2AFX-201ENST00000375167 DAND5Q8N907 189 aa9.94□□□□□ -0.82
H2AFX-201ENST00000375167 C14orf144Q96I85 54 aa9.93□□□□□ -0.82
H2AFX-201ENST00000375167 SPANXB1Q9NS25 103 aaPredicted RBP9.93□□□□□ -0.82
H2AFX-201ENST00000375167 TRBV10-2A0A0K0K1G8 114 aa9.92□□□□□ -0.82
H2AFX-201ENST00000375167 M0R378 163 aa9.92□□□□□ -0.82
H2AFX-201ENST00000375167 KRTAP13-3Q3SY46 172 aa9.92□□□□□ -0.82
H2AFX-201ENST00000375167 ADAMTSL4-AS1Q5T5F5 129 aa9.92□□□□□ -0.82
H2AFX-201ENST00000375167 FP248Q71RG6 208 aaPredicted RBP9.92□□□□□ -0.82
H2AFX-201ENST00000375167 Q8NDZ9 215 aa9.92□□□□□ -0.82
H2AFX-201ENST00000375167 LINC00308Q8TCZ7 52 aa9.92□□□□□ -0.82
H2AFX-201ENST00000375167 LITAFQ99732 161 aa9.92□□□□□ -0.82
H2AFX-201ENST00000375167 RPL28P46779 137 aaKnown RBP9.91□□□□□ -0.82
H2AFX-201ENST00000375167 ANAPC11Q9NYG5 84 aa9.91□□□□□ -0.82
H2AFX-201ENST00000375167 BCE1O60756 84 aa9.89□□□□□ -0.83
H2AFX-201ENST00000375167 KRTAP19-2Q3LHN2 52 aa9.89□□□□□ -0.83
H2AFX-201ENST00000375167 HIGD1BQ9P298 99 aa9.89□□□□□ -0.83
H2AFX-201ENST00000375167 IGKV2-28A0A075B6P5 120 aa9.88□□□□□ -0.83
H2AFX-201ENST00000375167 IGKV2D-28P01615 120 aa9.88□□□□□ -0.83
H2AFX-201ENST00000375167 NPC2P61916 151 aa9.88□□□□□ -0.83
H2AFX-201ENST00000375167 S100A7L2Q5SY68 101 aa9.88□□□□□ -0.83
H2AFX-201ENST00000375167 HIST1H4GQ99525 98 aa9.88□□□□□ -0.83
H2AFX-201ENST00000375167 UQCR10Q9UDW1 63 aa9.88□□□□□ -0.83
H2AFX-201ENST00000375167 FAM229BQ4G0N7 80 aa9.87□□□□□ -0.83
H2AFX-201ENST00000375167 NCR3O14931 201 aa9.85□□□□□ -0.83
H2AFX-201ENST00000375167 TAL2Q16559 108 aa9.85□□□□□ -0.83
H2AFX-201ENST00000375167 TMEM126AQ9H061 195 aa9.85□□□□□ -0.83
H2AFX-201ENST00000375167 TMEM238LA0A1B0GVL6 79 aa9.84□□□□□ -0.83
H2AFX-201ENST00000375167 A6NJY4 79 aa9.84□□□□□ -0.83
H2AFX-201ENST00000375167 M0R2T5 61 aa9.84□□□□□ -0.83
H2AFX-201ENST00000375167 SOSTDC1Q6X4U4 206 aa9.84□□□□□ -0.83
H2AFX-201ENST00000375167 MUSTN1Q8IVN3 82 aa9.84□□□□□ -0.83
H2AFX-201ENST00000375167 TRAV13-2A0A0B4J235 113 aa9.83□□□□□ -0.84
H2AFX-201ENST00000375167 SSPOA2VEC9 5147 aa9.82□□□□□ -0.84
H2AFX-201ENST00000375167 PRYO14603 147 aa9.82□□□□□ -0.84
H2AFX-201ENST00000375167 HINT1P49773 126 aaPredicted RBP9.82□□□□□ -0.84
H2AFX-201ENST00000375167 C2orf91Q6ZV80 131 aa9.82□□□□□ -0.84
H2AFX-201ENST00000375167 OR13C6PQ8NH95 151 aa9.82□□□□□ -0.84
H2AFX-201ENST00000375167 UBE2AP49459 152 aa9.81□□□□□ -0.84
H2AFX-201ENST00000375167 KRTAP13-1Q8IUC0 172 aa9.81□□□□□ -0.84
H2AFX-201ENST00000375167 USH2AO75445 5202 aa9.8□□□□□ -0.84
H2AFX-201ENST00000375167 TRBV10-3A0A0K0K1G6 114 aa9.79□□□□□ -0.84
H2AFX-201ENST00000375167 IGLV6-57P01721 117 aa9.79□□□□□ -0.84
H2AFX-201ENST00000375167 FAM19A1Q7Z5A9 133 aa9.79□□□□□ -0.84
H2AFX-201ENST00000375167 KCNQ1DNQ9H478 68 aa9.79□□□□□ -0.84
H2AFX-201ENST00000375167 A6NDN8 102 aa9.78□□□□□ -0.84
H2AFX-201ENST00000375167 EIF4EBP3O60516 100 aaPredicted RBP9.78□□□□□ -0.84
H2AFX-201ENST00000375167 TRAV23DV6A0A075B6W5 121 aa9.77□□□□□ -0.84
H2AFX-201ENST00000375167 HSD52Q0P140 79 aa9.77□□□□□ -0.84
H2AFX-201ENST00000375167 FCGBPQ9Y6R7 5405 aaPredicted RBP9.77□□□□□ -0.85
H2AFX-201ENST00000375167 ETDCA0A1B0GVM5 59 aa9.76□□□□□ -0.85
H2AFX-201ENST00000375167 A4D1N5 150 aa9.76□□□□□ -0.85
H2AFX-201ENST00000375167 PRLHP81277 87 aa9.76□□□□□ -0.85
H2AFX-201ENST00000375167 SPAG11AQ6PDA7 123 aa9.75□□□□□ -0.85
H2AFX-201ENST00000375167 CEND1Q8N111 149 aa9.75□□□□□ -0.85
H2AFX-201ENST00000375167 SNHG12Q9BXW3 62 aa9.75□□□□□ -0.85
H2AFX-201ENST00000375167 M0R143 59 aa9.75□□□□□ -0.85
H2AFX-201ENST00000375167 SPRR1AP35321 89 aa9.75□□□□□ -0.85
H2AFX-201ENST00000375167 RAB37Q96AX2 223 aa9.74□□□□□ -0.85
H2AFX-201ENST00000375167 ZNF73O43830 326 aaPredicted RBP9.73□□□□□ -0.85
H2AFX-201ENST00000375167 KRTAP4-16G5E9R7 235 aaPredicted RBP9.72□□□□□ -0.85
H2AFX-201ENST00000375167 A0A0B4J2C4 111 aa9.7□□□□□ -0.86
H2AFX-201ENST00000375167 VAMP3Q15836 100 aa9.7□□□□□ -0.86
H2AFX-201ENST00000375167 XP32Q5T750 250 aa9.7□□□□□ -0.86
H2AFX-201ENST00000375167 HIGD2AQ9BW72 106 aa9.7□□□□□ -0.86
H2AFX-201ENST00000375167 SYNE2Q8WXH0 6885 aaKnown RBP9.68□□□□□ -0.86
H2AFX-201ENST00000375167 TRBV7-6A0A0J9YX20 115 aa9.68□□□□□ -0.86
H2AFX-201ENST00000375167 C4orf48Q5BLP8 95 aa9.68□□□□□ -0.86
H2AFX-201ENST00000375167 ZNF706Q9Y5V0 76 aaPredicted RBP9.67□□□□□ -0.86
H2AFX-201ENST00000375167 A0A1B0GWB2 263 aa9.66□□□□□ -0.86
H2AFX-201ENST00000375167 B5MCH6 92 aa9.66□□□□□ -0.86
H2AFX-201ENST00000375167 Q6ZRX8 168 aa9.66□□□□□ -0.86
H2AFX-201ENST00000375167 C3orf22Q8N5N4 141 aa9.66□□□□□ -0.86
H2AFX-201ENST00000375167 NHP2Q9NX24 153 aaKnown RBP9.66□□□□□ -0.86
H2AFX-201ENST00000375167 MACF1Q9UPN3 7388 aaKnown RBP9.66□□□□□ -0.86
H2AFX-201ENST00000375167 SNCGO76070 127 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms