RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 H3BNG1 76 aa13.19□□□□□ -0.3
COL15A1-201ENST00000375001 C9orf129Q5T035 196 aaKnown RBP13.17□□□□□ -0.3
COL15A1-201ENST00000375001 KCNQ1DNQ9H478 68 aa13.16□□□□□ -0.3
COL15A1-201ENST00000375001 IGLV1-50A0A075B6I6 118 aa13.15□□□□□ -0.3
COL15A1-201ENST00000375001 A0A0G2JQZ4 141 aa13.15□□□□□ -0.3
COL15A1-201ENST00000375001 A0A1W2PNN7 141 aa13.15□□□□□ -0.3
COL15A1-201ENST00000375001 DSCR10P59022 87 aa13.15□□□□□ -0.3
COL15A1-201ENST00000375001 CDC42SE1Q9NRR8 79 aa13.15□□□□□ -0.3
COL15A1-201ENST00000375001 RTL8CO15255 209 aa13.13□□□□□ -0.31
COL15A1-201ENST00000375001 Q8N377 158 aa13.12□□□□□ -0.31
COL15A1-201ENST00000375001 LINC00588Q9Y4M8 146 aa13.1□□□□□ -0.31
COL15A1-201ENST00000375001 WIPF1O43516 503 aa13.09□□□□□ -0.31
COL15A1-201ENST00000375001 A0A1B0GVX0 72 aa13.09□□□□□ -0.31
COL15A1-201ENST00000375001 Q8NAQ8 132 aa13.06□□□□□ -0.32
COL15A1-201ENST00000375001 NBDYA0A0U1RRE5 68 aa13.03□□□□□ -0.32
COL15A1-201ENST00000375001 SPANXA2-OT1Q8N9U9 137 aa13.02□□□□□ -0.32
COL15A1-201ENST00000375001 RBM12B-AS1Q9P1G2 102 aa13.02□□□□□ -0.32
COL15A1-201ENST00000375001 FASNP49327 2511 aaKnown RBP13.02□□□□□ -0.33
COL15A1-201ENST00000375001 A0A0D9SG42 100 aa13□□□□□ -0.33
COL15A1-201ENST00000375001 OBSCN-AS1Q96MR7 158 aa12.99□□□□□ -0.33
COL15A1-201ENST00000375001 C5orf42Q9H799 3197 aa12.99□□□□□ -0.33
COL15A1-201ENST00000375001 CSNK1G2-AS1Q8NCQ2 148 aa12.98□□□□□ -0.33
COL15A1-201ENST00000375001 FAM104AQ969W3 186 aa12.98□□□□□ -0.33
COL15A1-201ENST00000375001 Q1T7F1 81 aa12.98□□□□□ -0.33
COL15A1-201ENST00000375001 DNAH10OSP0CZ25 163 aa12.96□□□□□ -0.33
COL15A1-201ENST00000375001 H3BS24 57 aa12.95□□□□□ -0.34
COL15A1-201ENST00000375001 A0A1W2PNM2 257 aa12.95□□□□□ -0.34
COL15A1-201ENST00000375001 PRR26Q8N8Z3 221 aa12.94□□□□□ -0.34
COL15A1-201ENST00000375001 LUZP6Q538Z0 58 aa12.93□□□□□ -0.34
COL15A1-201ENST00000375001 COX6B2Q6YFQ2 88 aa12.92□□□□□ -0.34
COL15A1-201ENST00000375001 BPTFQ12830 3046 aa12.91□□□□□ -0.34
COL15A1-201ENST00000375001 C15orf56Q8N910 161 aa12.91□□□□□ -0.34
COL15A1-201ENST00000375001 LINC01554Q52M75 96 aa12.9□□□□□ -0.34
COL15A1-201ENST00000375001 C9orf163Q8N9P6 203 aa12.89□□□□□ -0.35
COL15A1-201ENST00000375001 GIG44P09565 113 aaPredicted RBP12.89□□□□□ -0.35
COL15A1-201ENST00000375001 C9orf92A6NGG3 77 aa12.89□□□□□ -0.35
COL15A1-201ENST00000375001 ZNF575Q86XF7 245 aa12.89□□□□□ -0.35
COL15A1-201ENST00000375001 Q8N1X5 172 aa12.89□□□□□ -0.35
COL15A1-201ENST00000375001 A0A0C4DFX4 3053 aa12.88□□□□□ -0.35
COL15A1-201ENST00000375001 CHD7Q9P2D1 2997 aa12.88□□□□□ -0.35
COL15A1-201ENST00000375001 OCR1Q9BZK8 76 aa12.87□□□□□ -0.35
COL15A1-201ENST00000375001 PRR34Q9NV39 138 aa12.87□□□□□ -0.35
COL15A1-201ENST00000375001 ANAPC11Q9NYG5 84 aa12.86□□□□□ -0.35
COL15A1-201ENST00000375001 J3QL48 77 aa12.85□□□□□ -0.35
COL15A1-201ENST00000375001 IGLV5-48A0A075B6I7 105 aa12.84□□□□□ -0.35
COL15A1-201ENST00000375001 EPG5Q9HCE0 2579 aa12.84□□□□□ -0.35
COL15A1-201ENST00000375001 Q5XG85 94 aa12.83□□□□□ -0.35
COL15A1-201ENST00000375001 ZNF861PO60384 105 aa12.82□□□□□ -0.36
COL15A1-201ENST00000375001 PRAC1Q96KF2 57 aa12.81□□□□□ -0.36
COL15A1-201ENST00000375001 C19orf73Q9NVV2 129 aa12.8□□□□□ -0.36
COL15A1-201ENST00000375001 KRTAP24-1Q3LI83 254 aa12.79□□□□□ -0.36
COL15A1-201ENST00000375001 USP24Q9UPU5 2620 aa12.79□□□□□ -0.36
COL15A1-201ENST00000375001 LINC00304Q8N9R0 145 aa12.78□□□□□ -0.36
COL15A1-201ENST00000375001 Q75L30 129 aa12.77□□□□□ -0.37
COL15A1-201ENST00000375001 FAM229BQ4G0N7 80 aa12.77□□□□□ -0.37
COL15A1-201ENST00000375001 PLA2G2DQ9UNK4 145 aa12.75□□□□□ -0.37
COL15A1-201ENST00000375001 A0A096LNT2 108 aa12.75□□□□□ -0.37
COL15A1-201ENST00000375001 IGLV5-37A0A075B6J1 123 aa12.74□□□□□ -0.37
COL15A1-201ENST00000375001 TLX1NBP0CAT3 122 aa12.73□□□□□ -0.37
COL15A1-201ENST00000375001 FP248Q71RG6 208 aaPredicted RBP12.72□□□□□ -0.37
COL15A1-201ENST00000375001 LINC00612Q8N6U2 182 aa12.72□□□□□ -0.37
COL15A1-201ENST00000375001 CYSTM1Q9H1C7 97 aa12.7□□□□□ -0.38
COL15A1-201ENST00000375001 IGLV7-46A0A075B6I9 117 aa12.69□□□□□ -0.38
COL15A1-201ENST00000375001 CFAP54Q96N23 3096 aa12.68□□□□□ -0.38
COL15A1-201ENST00000375001 SPRR4Q96PI1 79 aa12.67□□□□□ -0.38
COL15A1-201ENST00000375001 Q8N9P0 234 aaPredicted RBP12.67□□□□□ -0.38
COL15A1-201ENST00000375001 A0A1B0GU33 70 aa12.65□□□□□ -0.38
COL15A1-201ENST00000375001 KRTAP10-3P60369 221 aa12.64□□□□□ -0.39
COL15A1-201ENST00000375001 KRTAP10-11P60412 298 aa12.62□□□□□ -0.39
COL15A1-201ENST00000375001 LINC01558Q9Y6Z2 57 aa12.61□□□□□ -0.39
COL15A1-201ENST00000375001 PSORS1C2Q9UIG4 136 aa12.61□□□□□ -0.39
COL15A1-201ENST00000375001 CASC10Q5T4H9 136 aa12.6□□□□□ -0.39
COL15A1-201ENST00000375001 CSAG1Q6PB30 78 aa12.6□□□□□ -0.39
COL15A1-201ENST00000375001 IGLV7-43P04211 117 aa12.59□□□□□ -0.39
COL15A1-201ENST00000375001 HRES1P13985 223 aa12.59□□□□□ -0.39
COL15A1-201ENST00000375001 MGAM2Q2M2H8 2515 aa12.58□□□□□ -0.4
COL15A1-201ENST00000375001 CR1P17927 2039 aa12.58□□□□□ -0.4
COL15A1-201ENST00000375001 CHD9Q3L8U1 2897 aa12.57□□□□□ -0.4
COL15A1-201ENST00000375001 HECTD1Q9ULT8 2610 aa12.57□□□□□ -0.4
COL15A1-201ENST00000375001 HTTP42858 3142 aa12.57□□□□□ -0.4
COL15A1-201ENST00000375001 Q5VV11 94 aa12.57□□□□□ -0.4
COL15A1-201ENST00000375001 RANBP2P49792 3224 aaKnown RBP12.56□□□□□ -0.4
COL15A1-201ENST00000375001 A0A087WTM6 91 aa12.55□□□□□ -0.4
COL15A1-201ENST00000375001 WWC2-AS2Q96NR7 200 aa12.54□□□□□ -0.4
COL15A1-201ENST00000375001 FLNBO75369 2602 aaKnown RBP12.54□□□□□ -0.4
COL15A1-201ENST00000375001 LAMA2P24043 3122 aaKnown RBP12.53□□□□□ -0.4
COL15A1-201ENST00000375001 A0A0A0MQY5 61 aa12.51□□□□□ -0.41
COL15A1-201ENST00000375001 CNBPP62633 177 aaKnown RBP12.51□□□□□ -0.41
COL15A1-201ENST00000375001 SMR3BP02814 79 aaPredicted RBP12.51□□□□□ -0.41
COL15A1-201ENST00000375001 SPINK7P58062 85 aa12.5□□□□□ -0.41
COL15A1-201ENST00000375001 MKI67P46013 3256 aaKnown RBP12.48□□□□□ -0.41
COL15A1-201ENST00000375001 K7EIL1 84 aa12.47□□□□□ -0.41
COL15A1-201ENST00000375001 FLNAP21333 2647 aaKnown RBP12.47□□□□□ -0.41
COL15A1-201ENST00000375001 CAMK2N1Q7Z7J9 78 aa12.45□□□□□ -0.42
COL15A1-201ENST00000375001 CENPEQ02224 2701 aa12.44□□□□□ -0.42
COL15A1-201ENST00000375001 LINC00483Q53H64 154 aa12.44□□□□□ -0.42
COL15A1-201ENST00000375001 OXTP01178 125 aa12.44□□□□□ -0.42
COL15A1-201ENST00000375001 LAMA3Q16787 3333 aa12.41□□□□□ -0.42
COL15A1-201ENST00000375001 DMAC1Q96GE9 116 aa12.41□□□□□ -0.42
COL15A1-201ENST00000375001 KRTAP1-3Q8IUG1 177 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms