RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 ARL17AQ8IVW1 177 aa9.76□□□□□ -0.85
HDHD3-202ENST00000374180 IGLV1-50A0A075B6I6 118 aa9.75□□□□□ -0.85
HDHD3-202ENST00000374180 A0A1B0GWB2 263 aa9.75□□□□□ -0.85
HDHD3-202ENST00000374180 M0R378 163 aa9.75□□□□□ -0.85
HDHD3-202ENST00000374180 BCE1O60756 84 aa9.74□□□□□ -0.85
HDHD3-202ENST00000374180 TIMM17BO60830 172 aa9.74□□□□□ -0.85
HDHD3-202ENST00000374180 REG3GQ6UW15 175 aa9.74□□□□□ -0.85
HDHD3-202ENST00000374180 DIRC1Q969H9 104 aa9.74□□□□□ -0.85
HDHD3-202ENST00000374180 SPANXB1Q9NS25 103 aaPredicted RBP9.74□□□□□ -0.85
HDHD3-202ENST00000374180 K7ERU9 68 aa9.72□□□□□ -0.85
HDHD3-202ENST00000374180 NCR3O14931 201 aa9.72□□□□□ -0.85
HDHD3-202ENST00000374180 NPC2P61916 151 aa9.72□□□□□ -0.85
HDHD3-202ENST00000374180 ZNF861PO60384 105 aa9.72□□□□□ -0.85
HDHD3-202ENST00000374180 OCIAD2Q56VL3 154 aa9.72□□□□□ -0.85
HDHD3-202ENST00000374180 LITAFQ99732 161 aa9.72□□□□□ -0.85
HDHD3-202ENST00000374180 TMEM238C9JI98 176 aa9.71□□□□□ -0.86
HDHD3-202ENST00000374180 K7ERJ3 54 aa9.71□□□□□ -0.86
HDHD3-202ENST00000374180 NAA38Q9BRA0 125 aaKnown RBP9.71□□□□□ -0.86
HDHD3-202ENST00000374180 H0Y9J4 135 aa9.7□□□□□ -0.86
HDHD3-202ENST00000374180 RPL28P46779 137 aaKnown RBP9.7□□□□□ -0.86
HDHD3-202ENST00000374180 SOSTDC1Q6X4U4 206 aa9.7□□□□□ -0.86
HDHD3-202ENST00000374180 TMEM126AQ9H061 195 aa9.7□□□□□ -0.86
HDHD3-202ENST00000374180 EIF4EBP3O60516 100 aaPredicted RBP9.69□□□□□ -0.86
HDHD3-202ENST00000374180 NDUFC2O95298 119 aa9.69□□□□□ -0.86
HDHD3-202ENST00000374180 LYRM7Q5U5X0 104 aa9.69□□□□□ -0.86
HDHD3-202ENST00000374180 TRBV10-2A0A0K0K1G8 114 aa9.68□□□□□ -0.86
HDHD3-202ENST00000374180 UBE2AP49459 152 aa9.68□□□□□ -0.86
HDHD3-202ENST00000374180 LINC00308Q8TCZ7 52 aa9.68□□□□□ -0.86
HDHD3-202ENST00000374180 LINC01600Q96MT4 127 aa9.68□□□□□ -0.86
HDHD3-202ENST00000374180 TRBV10-3A0A0K0K1G6 114 aa9.66□□□□□ -0.86
HDHD3-202ENST00000374180 COPS9Q8WXC6 57 aa9.66□□□□□ -0.86
HDHD3-202ENST00000374180 SPANXDQ9BXN6 97 aa9.66□□□□□ -0.86
HDHD3-202ENST00000374180 SPANXCQ9NY87 97 aa9.66□□□□□ -0.86
HDHD3-202ENST00000374180 HERC1Q15751 4861 aa9.66□□□□□ -0.86
HDHD3-202ENST00000374180 F8W1H4 67 aa9.66□□□□□ -0.86
HDHD3-202ENST00000374180 FAM19A1Q7Z5A9 133 aa9.66□□□□□ -0.86
HDHD3-202ENST00000374180 PRYO14603 147 aa9.65□□□□□ -0.87
HDHD3-202ENST00000374180 IFITM1P13164 125 aa9.65□□□□□ -0.87
HDHD3-202ENST00000374180 S100A7L2Q5SY68 101 aa9.65□□□□□ -0.87
HDHD3-202ENST00000374180 PPDPFQ9H3Y8 114 aa9.65□□□□□ -0.87
HDHD3-202ENST00000374180 KCNQ1DNQ9H478 68 aa9.65□□□□□ -0.87
HDHD3-202ENST00000374180 MT1HL1P0DM35 61 aa9.64□□□□□ -0.87
HDHD3-202ENST00000374180 KRTAP13-1Q8IUC0 172 aa9.64□□□□□ -0.87
HDHD3-202ENST00000374180 TNXBP22105 4242 aa9.63□□□□□ -0.87
HDHD3-202ENST00000374180 PRLHP81277 87 aa9.63□□□□□ -0.87
HDHD3-202ENST00000374180 VPS25Q9BRG1 176 aa9.62□□□□□ -0.87
HDHD3-202ENST00000374180 IGLV6-57P01721 117 aa9.61□□□□□ -0.87
HDHD3-202ENST00000374180 LINC00337Q8N6G1 96 aa9.6□□□□□ -0.87
HDHD3-202ENST00000374180 ETDCA0A1B0GVM5 59 aa9.59□□□□□ -0.87
HDHD3-202ENST00000374180 J3QR89 54 aa9.59□□□□□ -0.87
HDHD3-202ENST00000374180 KRTAP1-4P0C5Y4 121 aa9.59□□□□□ -0.87
HDHD3-202ENST00000374180 SPRR1AP35321 89 aa9.59□□□□□ -0.87
HDHD3-202ENST00000374180 KRTAP10-8P60410 259 aa9.59□□□□□ -0.87
HDHD3-202ENST00000374180 PRO1854Q9UHT4 67 aa9.59□□□□□ -0.87
HDHD3-202ENST00000374180 TRBV20-1A0A075B6N2 111 aa9.59□□□□□ -0.87
HDHD3-202ENST00000374180 A0A0B4J2C4 111 aa9.59□□□□□ -0.87
HDHD3-202ENST00000374180 TSPAN13O95857 204 aa9.59□□□□□ -0.87
HDHD3-202ENST00000374180 MUSTN1Q8IVN3 82 aa9.59□□□□□ -0.87
HDHD3-202ENST00000374180 OR13C6PQ8NH95 151 aa9.59□□□□□ -0.87
HDHD3-202ENST00000374180 CFC1BP0CG36 223 aa9.58□□□□□ -0.88
HDHD3-202ENST00000374180 CFC1P0CG37 223 aa9.58□□□□□ -0.88
HDHD3-202ENST00000374180 TRAV23DV6A0A075B6W5 121 aa9.57□□□□□ -0.88
HDHD3-202ENST00000374180 KRTAP4-16G5E9R7 235 aaPredicted RBP9.57□□□□□ -0.88
HDHD3-202ENST00000374180 H3BMG7 143 aa9.57□□□□□ -0.88
HDHD3-202ENST00000374180 PRR26Q8N8Z3 221 aa9.57□□□□□ -0.88
HDHD3-202ENST00000374180 HIGD2AQ9BW72 106 aa9.57□□□□□ -0.88
HDHD3-202ENST00000374180 A4D1N5 150 aa9.55□□□□□ -0.88
HDHD3-202ENST00000374180 B5MCH6 92 aa9.53□□□□□ -0.88
HDHD3-202ENST00000374180 ZNF73O43830 326 aaPredicted RBP9.53□□□□□ -0.88
HDHD3-202ENST00000374180 PSMB2P49721 201 aa9.53□□□□□ -0.88
HDHD3-202ENST00000374180 SCGB1C2P0DMR2 95 aa9.53□□□□□ -0.88
HDHD3-202ENST00000374180 PRO0461Q9UI25 63 aa9.53□□□□□ -0.88
HDHD3-202ENST00000374180 RPL13AP40429 203 aaKnown RBP9.52□□□□□ -0.89
HDHD3-202ENST00000374180 PCP4P48539 62 aa9.52□□□□□ -0.89
HDHD3-202ENST00000374180 ANAPC11Q9NYG5 84 aa9.52□□□□□ -0.89
HDHD3-202ENST00000374180 SMCR5Q8TEV8 140 aa9.51□□□□□ -0.89
HDHD3-202ENST00000374180 CRYGAP11844 174 aa9.5□□□□□ -0.89
HDHD3-202ENST00000374180 Q6ZRX8 168 aa9.5□□□□□ -0.89
HDHD3-202ENST00000374180 A0A087X002 238 aa9.48□□□□□ -0.89
HDHD3-202ENST00000374180 TRAV13-2A0A0B4J235 113 aa9.48□□□□□ -0.89
HDHD3-202ENST00000374180 Q1RN00 199 aa9.48□□□□□ -0.89
HDHD3-202ENST00000374180 ZNF706Q9Y5V0 76 aaPredicted RBP9.48□□□□□ -0.89
HDHD3-202ENST00000374180 TCL1BO95988 128 aa9.47□□□□□ -0.89
HDHD3-202ENST00000374180 ETDBQ3ZM63 59 aa9.47□□□□□ -0.89
HDHD3-202ENST00000374180 FAM229BQ4G0N7 80 aa9.47□□□□□ -0.89
HDHD3-202ENST00000374180 SPRR4Q96PI1 79 aa9.47□□□□□ -0.89
HDHD3-202ENST00000374180 Q9BRP9 147 aa9.47□□□□□ -0.89
HDHD3-202ENST00000374180 COX6CP09669 75 aa9.47□□□□□ -0.89
HDHD3-202ENST00000374180 ATXN8Q156A1 80 aa9.46□□□□□ -0.9
HDHD3-202ENST00000374180 C6orf99Q4VX62 202 aa9.46□□□□□ -0.9
HDHD3-202ENST00000374180 ERC2-IT1O76042 136 aa9.45□□□□□ -0.9
HDHD3-202ENST00000374180 TYMSOSQ8TAI1 123 aa9.45□□□□□ -0.9
HDHD3-202ENST00000374180 COX7BP24311 80 aa9.43□□□□□ -0.9
HDHD3-202ENST00000374180 TEN1Q86WV5 123 aa9.43□□□□□ -0.9
HDHD3-202ENST00000374180 PPDPFLQ8WWR9 84 aa9.43□□□□□ -0.9
HDHD3-202ENST00000374180 H7C2G1 150 aa9.42□□□□□ -0.9
HDHD3-202ENST00000374180 SMCPP49901 116 aaPredicted RBP9.42□□□□□ -0.9
HDHD3-202ENST00000374180 KRTAP13-2Q52LG2 175 aa9.42□□□□□ -0.9
HDHD3-202ENST00000374180 TRBV7-6A0A0J9YX20 115 aa9.41□□□□□ -0.9
HDHD3-202ENST00000374180 ELOF1P60002 83 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms