RNA–Protein interactions for RNA: ENST00000373691.4

CXCR3-201, Transcript of C-X-C motif chemokine receptor 3, humanhuman

TSL 1 (best) BASIC

Gene CXCR3, Length 1,861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR3-201ENST00000373691 CASC10Q5T4H9 136 aa13.16□□□□□ -0.3
CXCR3-201ENST00000373691 CYSTM1Q9H1C7 97 aa13.16□□□□□ -0.3
CXCR3-201ENST00000373691 DHRS4-AS1Q9P1J3 65 aa13.13□□□□□ -0.31
CXCR3-201ENST00000373691 DNAH3Q8TD57 4116 aa13.13□□□□□ -0.31
CXCR3-201ENST00000373691 IGLV1-50A0A075B6I6 118 aa13.12□□□□□ -0.31
CXCR3-201ENST00000373691 KRTAP4-16G5E9R7 235 aaPredicted RBP13.12□□□□□ -0.31
CXCR3-201ENST00000373691 K7EIL1 84 aa13.12□□□□□ -0.31
CXCR3-201ENST00000373691 SPRR1AP35321 89 aa13.12□□□□□ -0.31
CXCR3-201ENST00000373691 TMEM258P61165 79 aa13.12□□□□□ -0.31
CXCR3-201ENST00000373691 PRB2P02812 416 aaPredicted RBP13.11□□□□□ -0.31
CXCR3-201ENST00000373691 Q6ZRX8 168 aa13.11□□□□□ -0.31
CXCR3-201ENST00000373691 TENM3Q9P273 2699 aa13.11□□□□□ -0.31
CXCR3-201ENST00000373691 Q8N377 158 aa13.1□□□□□ -0.31
CXCR3-201ENST00000373691 CMYA5Q8N3K9 4069 aa13.1□□□□□ -0.31
CXCR3-201ENST00000373691 TRAV7A0A075B6U4 112 aa13.09□□□□□ -0.31
CXCR3-201ENST00000373691 FAM168BA1KXE4 195 aa13.09□□□□□ -0.31
CXCR3-201ENST00000373691 LOC107984640A0A0U1RRK4 108 aa13.08□□□□□ -0.32
CXCR3-201ENST00000373691 KRTAP7-1Q8IUC3 87 aa13.08□□□□□ -0.32
CXCR3-201ENST00000373691 IGLV5-48A0A075B6I7 105 aa13.07□□□□□ -0.32
CXCR3-201ENST00000373691 ETDCA0A1B0GVM5 59 aa13.06□□□□□ -0.32
CXCR3-201ENST00000373691 RPL37AP8A6NKH3 93 aa13.06□□□□□ -0.32
CXCR3-201ENST00000373691 Q9BRP9 147 aa13.06□□□□□ -0.32
CXCR3-201ENST00000373691 DEFB105AQ8NG35 78 aa13.05□□□□□ -0.32
CXCR3-201ENST00000373691 SCXQ7RTU7 201 aa13.04□□□□□ -0.32
CXCR3-201ENST00000373691 SVIPQ8NHG7 77 aa13.04□□□□□ -0.32
CXCR3-201ENST00000373691 J3KT08 172 aa13.04□□□□□ -0.32
CXCR3-201ENST00000373691 MRPL55Q7Z7F7 128 aaKnown RBP13.03□□□□□ -0.32
CXCR3-201ENST00000373691 RPS28P62857 69 aaKnown RBP13.02□□□□□ -0.32
CXCR3-201ENST00000373691 FBN1P35555 2871 aaKnown RBP13.02□□□□□ -0.33
CXCR3-201ENST00000373691 A0A1B0GW54 56 aa13.01□□□□□ -0.33
CXCR3-201ENST00000373691 FAM19A5Q7Z5A7 132 aaPredicted RBP13.01□□□□□ -0.33
CXCR3-201ENST00000373691 PKD1L1Q8TDX9 2849 aa13.01□□□□□ -0.33
CXCR3-201ENST00000373691 NREPQ16612 68 aa13□□□□□ -0.33
CXCR3-201ENST00000373691 TNP2Q05952 138 aa12.99□□□□□ -0.33
CXCR3-201ENST00000373691 C20orf197Q8N268 126 aa12.99□□□□□ -0.33
CXCR3-201ENST00000373691 IGKV4-1P06312 121 aa12.95□□□□□ -0.34
CXCR3-201ENST00000373691 ST20-AS1Q8NBB2 130 aa12.95□□□□□ -0.34
CXCR3-201ENST00000373691 DPH3Q96FX2 82 aa12.95□□□□□ -0.34
CXCR3-201ENST00000373691 FUSP35637 526 aaKnown RBP eCLIP12.95□□□□□ -0.34
CXCR3-201ENST00000373691 REG3GQ6UW15 175 aa12.95□□□□□ -0.34
CXCR3-201ENST00000373691 STAB1Q9NY15 2570 aa12.95□□□□□ -0.34
CXCR3-201ENST00000373691 C3orf84H3BNL1 204 aa12.94□□□□□ -0.34
CXCR3-201ENST00000373691 ANK2Q01484 3957 aa12.93□□□□□ -0.34
CXCR3-201ENST00000373691 A0A1W2PNM2 257 aa12.93□□□□□ -0.34
CXCR3-201ENST00000373691 BPY2O14599 106 aa12.93□□□□□ -0.34
CXCR3-201ENST00000373691 CNBPP62633 177 aaKnown RBP12.93□□□□□ -0.34
CXCR3-201ENST00000373691 C1orf137Q5JT78 98 aa12.93□□□□□ -0.34
CXCR3-201ENST00000373691 ERC2-IT1O76042 136 aa12.92□□□□□ -0.34
CXCR3-201ENST00000373691 KLKP1Q107X0 134 aa12.92□□□□□ -0.34
CXCR3-201ENST00000373691 KRTAP1-5Q9BYS1 174 aa12.92□□□□□ -0.34
CXCR3-201ENST00000373691 UBE2BP63146 152 aa12.91□□□□□ -0.34
CXCR3-201ENST00000373691 Q8NBF4 154 aa12.91□□□□□ -0.34
CXCR3-201ENST00000373691 DNAH1Q9P2D7 4330 aa12.91□□□□□ -0.34
CXCR3-201ENST00000373691 C16orf90A8MZG2 172 aa12.9□□□□□ -0.34
CXCR3-201ENST00000373691 A0A096LNI7 61 aa12.89□□□□□ -0.35
CXCR3-201ENST00000373691 Q8N9L7 120 aa12.88□□□□□ -0.35
CXCR3-201ENST00000373691 SPRR4Q96PI1 79 aa12.88□□□□□ -0.35
CXCR3-201ENST00000373691 H7BZZ5 65 aa12.87□□□□□ -0.35
CXCR3-201ENST00000373691 APLNQ9ULZ1 77 aa12.86□□□□□ -0.35
CXCR3-201ENST00000373691 HUWE1Q7Z6Z7 4374 aaKnown RBP12.85□□□□□ -0.35
CXCR3-201ENST00000373691 FAM236DA0A1B0GTK5 79 aa12.85□□□□□ -0.35
CXCR3-201ENST00000373691 FAM236CP0DP71 79 aa12.85□□□□□ -0.35
CXCR3-201ENST00000373691 SMIM29Q86T20 159 aa12.85□□□□□ -0.35
CXCR3-201ENST00000373691 UBE2DNLQ8IWF7 75 aa12.85□□□□□ -0.35
CXCR3-201ENST00000373691 PSCAO43653 123 aa12.84□□□□□ -0.35
CXCR3-201ENST00000373691 C14orf177Q52M58 125 aa12.84□□□□□ -0.35
CXCR3-201ENST00000373691 A0A1W2PNN7 141 aa12.82□□□□□ -0.36
CXCR3-201ENST00000373691 IGKV2-24A0A0C4DH68 120 aa12.8□□□□□ -0.36
CXCR3-201ENST00000373691 SNURFQ9Y675 71 aa12.8□□□□□ -0.36
CXCR3-201ENST00000373691 F8WEM9 126 aa12.8□□□□□ -0.36
CXCR3-201ENST00000373691 NDUFC1O43677 76 aa12.8□□□□□ -0.36
CXCR3-201ENST00000373691 OXTP01178 125 aa12.8□□□□□ -0.36
CXCR3-201ENST00000373691 LINC00476Q8WZB0 136 aa12.79□□□□□ -0.36
CXCR3-201ENST00000373691 OCR1Q9BZK8 76 aa12.79□□□□□ -0.36
CXCR3-201ENST00000373691 NOTCH1P46531 2555 aa12.76□□□□□ -0.37
CXCR3-201ENST00000373691 IGLV8-61A0A075B6I0 122 aa12.76□□□□□ -0.37
CXCR3-201ENST00000373691 PRLHP81277 87 aa12.76□□□□□ -0.37
CXCR3-201ENST00000373691 TMEM254Q8TBM7 123 aa12.75□□□□□ -0.37
CXCR3-201ENST00000373691 B9D2Q9BPU9 175 aa12.74□□□□□ -0.37
CXCR3-201ENST00000373691 PKIGQ9Y2B9 76 aa12.74□□□□□ -0.37
CXCR3-201ENST00000373691 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.73□□□□□ -0.37
CXCR3-201ENST00000373691 IGFL1Q6UW32 110 aa12.73□□□□□ -0.37
CXCR3-201ENST00000373691 DSCR10P59022 87 aa12.72□□□□□ -0.37
CXCR3-201ENST00000373691 SERP1Q9Y6X1 66 aa12.72□□□□□ -0.37
CXCR3-201ENST00000373691 EPM2AB3EWF7 344 aa12.72□□□□□ -0.37
CXCR3-201ENST00000373691 H0Y9J4 135 aa12.71□□□□□ -0.37
CXCR3-201ENST00000373691 A0A0U1RQV1 116 aa12.7□□□□□ -0.38
CXCR3-201ENST00000373691 HIGD2AQ9BW72 106 aa12.7□□□□□ -0.38
CXCR3-201ENST00000373691 CHTF8P0CG12 524 aa12.69□□□□□ -0.38
CXCR3-201ENST00000373691 ATP5EP56381 51 aaPredicted RBP12.69□□□□□ -0.38
CXCR3-201ENST00000373691 PHF5AQ7RTV0 110 aaKnown RBP12.69□□□□□ -0.38
CXCR3-201ENST00000373691 C9orf163Q8N9P6 203 aa12.69□□□□□ -0.38
CXCR3-201ENST00000373691 COL6A5A8TX70 2615 aa12.68□□□□□ -0.38
CXCR3-201ENST00000373691 LRCOL1A6NCL2 159 aa12.68□□□□□ -0.38
CXCR3-201ENST00000373691 SPRR1BP22528 89 aa12.67□□□□□ -0.38
CXCR3-201ENST00000373691 KRTAP11-1Q8IUC1 163 aa12.67□□□□□ -0.38
CXCR3-201ENST00000373691 NBDYA0A0U1RRE5 68 aa12.65□□□□□ -0.38
CXCR3-201ENST00000373691 UBE2AP49459 152 aa12.65□□□□□ -0.38
CXCR3-201ENST00000373691 K7EQZ3 153 aa12.65□□□□□ -0.38
CXCR3-201ENST00000373691 LCE6AA0A183 80 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms