RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 IGLV5-52A0A0A0MRZ9 124 aa6□□□□□ -1.45
ATG4A-203ENST00000372232 IGLV9-49A0A0B4J1Y8 123 aa6□□□□□ -1.45
ATG4A-203ENST00000372232 SCXQ7RTU7 201 aa6□□□□□ -1.45
ATG4A-203ENST00000372232 JMJD1CQ15652 2540 aa6□□□□□ -1.45
ATG4A-203ENST00000372232 IGLV1-51P01701 117 aa5.99□□□□□ -1.45
ATG4A-203ENST00000372232 CMC4P56277 68 aaPredicted RBP5.99□□□□□ -1.45
ATG4A-203ENST00000372232 C7orf65Q6ZTY9 151 aa5.99□□□□□ -1.45
ATG4A-203ENST00000372232 DIRC1Q969H9 104 aa5.99□□□□□ -1.45
ATG4A-203ENST00000372232 TRGV1A0A0A0MS02 117 aa5.99□□□□□ -1.45
ATG4A-203ENST00000372232 TRBV6-8A0A0A6YYG3 113 aa5.99□□□□□ -1.45
ATG4A-203ENST00000372232 GIG44P09565 113 aaPredicted RBP5.99□□□□□ -1.45
ATG4A-203ENST00000372232 LCA10Q71F78 164 aa5.99□□□□□ -1.45
ATG4A-203ENST00000372232 IGKV4-1P06312 121 aa5.98□□□□□ -1.45
ATG4A-203ENST00000372232 SMR3AQ99954 134 aa5.98□□□□□ -1.45
ATG4A-203ENST00000372232 HIVEP2P31629 2446 aa5.98□□□□□ -1.45
ATG4A-203ENST00000372232 C10orf25Q5T742 122 aa5.98□□□□□ -1.45
ATG4A-203ENST00000372232 ZCCHC13Q8WW36 166 aaKnown RBP5.98□□□□□ -1.45
ATG4A-203ENST00000372232 MUC7Q8TAX7 377 aa5.97□□□□□ -1.45
ATG4A-203ENST00000372232 KRTAP3-1Q9BYR8 98 aa5.97□□□□□ -1.45
ATG4A-203ENST00000372232 WFDC10AQ9H1F0 79 aa5.97□□□□□ -1.45
ATG4A-203ENST00000372232 HCG22E2RYF7 251 aa5.97□□□□□ -1.45
ATG4A-203ENST00000372232 LINC00575Q6W349 94 aa5.97□□□□□ -1.45
ATG4A-203ENST00000372232 NOTCH3Q9UM47 2321 aa5.97□□□□□ -1.45
ATG4A-203ENST00000372232 H3BQ85 93 aa5.96□□□□□ -1.46
ATG4A-203ENST00000372232 SPTSSBQ8NFR3 76 aa5.96□□□□□ -1.46
ATG4A-203ENST00000372232 SPATA3Q8NHX4 192 aa5.96□□□□□ -1.46
ATG4A-203ENST00000372232 CDC42SE2Q9NRR3 84 aa5.96□□□□□ -1.46
ATG4A-203ENST00000372232 CHKB-CPT1BH3BT56 60 aa5.96□□□□□ -1.46
ATG4A-203ENST00000372232 CDK2AP2O75956 126 aa5.96□□□□□ -1.46
ATG4A-203ENST00000372232 NOP10Q9NPE3 64 aaKnown RBP5.96□□□□□ -1.46
ATG4A-203ENST00000372232 NSD1Q96L73 2696 aaPredicted RBP5.95□□□□□ -1.46
ATG4A-203ENST00000372232 CSNK1G2-AS1Q8NCQ2 148 aa5.95□□□□□ -1.46
ATG4A-203ENST00000372232 KRTAP10-3P60369 221 aa5.94□□□□□ -1.46
ATG4A-203ENST00000372232 KRTAP21-3Q3LHN1 58 aa5.94□□□□□ -1.46
ATG4A-203ENST00000372232 C16orf74Q96GX8 76 aa5.94□□□□□ -1.46
ATG4A-203ENST00000372232 LIMD2Q9BT23 127 aa5.94□□□□□ -1.46
ATG4A-203ENST00000372232 TOMM7Q9P0U1 55 aa5.94□□□□□ -1.46
ATG4A-203ENST00000372232 C2CD3Q4AC94 2353 aa5.92□□□□□ -1.46
ATG4A-203ENST00000372232 TRGV2A0A075B6R0 118 aa5.92□□□□□ -1.46
ATG4A-203ENST00000372232 C6orf99Q4VX62 202 aa5.92□□□□□ -1.46
ATG4A-203ENST00000372232 Q8N9L7 120 aa5.92□□□□□ -1.46
ATG4A-203ENST00000372232 FN1P02751 2386 aaKnown RBP5.91□□□□□ -1.46
ATG4A-203ENST00000372232 Q8N9P0 234 aaPredicted RBP5.91□□□□□ -1.46
ATG4A-203ENST00000372232 IGLV4-60A0A075B6I1 120 aa5.91□□□□□ -1.46
ATG4A-203ENST00000372232 LINC00612Q8N6U2 182 aa5.91□□□□□ -1.46
ATG4A-203ENST00000372232 VWFP04275 2813 aa5.91□□□□□ -1.46
ATG4A-203ENST00000372232 NKAPP1Q8N9T2 125 aa5.9□□□□□ -1.47
ATG4A-203ENST00000372232 CDC42SE1Q9NRR8 79 aa5.9□□□□□ -1.47
ATG4A-203ENST00000372232 IGHV3OR16-9A0A0B4J2B5 98 aa5.89□□□□□ -1.47
ATG4A-203ENST00000372232 LOC100131303A0A0U1RQF7 123 aa5.89□□□□□ -1.47
ATG4A-203ENST00000372232 IGLV5-37A0A075B6J1 123 aa5.88□□□□□ -1.47
ATG4A-203ENST00000372232 TRGV4A0A0C4DH28 118 aa5.88□□□□□ -1.47
ATG4A-203ENST00000372232 COX7BP24311 80 aa5.88□□□□□ -1.47
ATG4A-203ENST00000372232 ELOF1P60002 83 aaKnown RBP5.88□□□□□ -1.47
ATG4A-203ENST00000372232 PRR3P79522 188 aaKnown RBP5.88□□□□□ -1.47
ATG4A-203ENST00000372232 SMIM29Q86T20 159 aa5.88□□□□□ -1.47
ATG4A-203ENST00000372232 PRR15LQ9BU68 103 aa5.88□□□□□ -1.47
ATG4A-203ENST00000372232 LOC101927531A0A1B0GV80 90 aa5.87□□□□□ -1.47
ATG4A-203ENST00000372232 Q6ZQY7 126 aa5.87□□□□□ -1.47
ATG4A-203ENST00000372232 TENM1Q9UKZ4 2725 aa5.87□□□□□ -1.47
ATG4A-203ENST00000372232 A6NED7 52 aa5.86□□□□□ -1.47
ATG4A-203ENST00000372232 NDUFB1O75438 58 aa5.86□□□□□ -1.47
ATG4A-203ENST00000372232 CELA1Q9UNI1 258 aa5.86□□□□□ -1.47
ATG4A-203ENST00000372232 NBEAL2Q6ZNJ1 2754 aa5.86□□□□□ -1.47
ATG4A-203ENST00000372232 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.86□□□□□ -1.47
ATG4A-203ENST00000372232 DEFB130BP0DP73 79 aa5.86□□□□□ -1.47
ATG4A-203ENST00000372232 DEFB130AP0DP74 79 aa5.86□□□□□ -1.47
ATG4A-203ENST00000372232 MOBPQ13875 183 aa5.85□□□□□ -1.47
ATG4A-203ENST00000372232 Q9BRP9 147 aa5.85□□□□□ -1.47
ATG4A-203ENST00000372232 PRR4Q16378 134 aa5.85□□□□□ -1.47
ATG4A-203ENST00000372232 B9D2Q9BPU9 175 aa5.85□□□□□ -1.47
ATG4A-203ENST00000372232 TRRAPQ9Y4A5 3859 aa5.84□□□□□ -1.47
ATG4A-203ENST00000372232 ETDCA0A1B0GVM5 59 aa5.84□□□□□ -1.47
ATG4A-203ENST00000372232 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.83□□□□□ -1.48
ATG4A-203ENST00000372232 COX17Q14061 63 aa5.82□□□□□ -1.48
ATG4A-203ENST00000372232 Q8IZM0 81 aa5.82□□□□□ -1.48
ATG4A-203ENST00000372232 ATRQ13535 2644 aa5.82□□□□□ -1.48
ATG4A-203ENST00000372232 LINC01554Q52M75 96 aa5.82□□□□□ -1.48
ATG4A-203ENST00000372232 C9orf116Q5BN46 136 aaPredicted RBP5.82□□□□□ -1.48
ATG4A-203ENST00000372232 LINC00208Q96KT6 92 aa5.82□□□□□ -1.48
ATG4A-203ENST00000372232 SPANXA2-OT1Q8N9U9 137 aa5.81□□□□□ -1.48
ATG4A-203ENST00000372232 Q8NDZ9 215 aa5.81□□□□□ -1.48
ATG4A-203ENST00000372232 PRO0255Q9UI72 69 aa5.81□□□□□ -1.48
ATG4A-203ENST00000372232 IGKV3OR2-268A0A0C4DH90 116 aa5.8□□□□□ -1.48
ATG4A-203ENST00000372232 DEFB135Q30KP9 77 aa5.8□□□□□ -1.48
ATG4A-203ENST00000372232 ST20-AS1Q8NBB2 130 aa5.8□□□□□ -1.48
ATG4A-203ENST00000372232 PRB2P02812 416 aaPredicted RBP5.8□□□□□ -1.48
ATG4A-203ENST00000372232 IGLV6-57P01721 117 aa5.79□□□□□ -1.48
ATG4A-203ENST00000372232 DEFB4AO15263 64 aa5.79□□□□□ -1.48
ATG4A-203ENST00000372232 HIGD2BQ4VC39 106 aa5.79□□□□□ -1.48
ATG4A-203ENST00000372232 KLK12Q9UKR0 248 aa5.79□□□□□ -1.48
ATG4A-203ENST00000372232 LINC00959A0A1B0GUT2 108 aa5.78□□□□□ -1.48
ATG4A-203ENST00000372232 A0A1B0GUV1 79 aa5.78□□□□□ -1.48
ATG4A-203ENST00000372232 LINC00313P59037 77 aa5.78□□□□□ -1.48
ATG4A-203ENST00000372232 A0A096LPF7 62 aa5.77□□□□□ -1.49
ATG4A-203ENST00000372232 PRAC1Q96KF2 57 aa5.77□□□□□ -1.49
ATG4A-203ENST00000372232 FBN1P35555 2871 aaKnown RBP5.77□□□□□ -1.49
ATG4A-203ENST00000372232 Q8NAQ8 132 aa5.76□□□□□ -1.49
ATG4A-203ENST00000372232 KCNQ1DNQ9H478 68 aa5.76□□□□□ -1.49
ATG4A-203ENST00000372232 C3orf84H3BNL1 204 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms