RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 TEX15Q9BXT5 2789 aa9.73□□□□□ -0.85
NDC1-201ENST00000371429 SMR3BP02814 79 aaPredicted RBP9.72□□□□□ -0.85
NDC1-201ENST00000371429 KCNQ1DNQ9H478 68 aa9.72□□□□□ -0.85
NDC1-201ENST00000371429 LINC00336Q6ZUF6 198 aa9.72□□□□□ -0.85
NDC1-201ENST00000371429 COL6A5A8TX70 2615 aa9.72□□□□□ -0.85
NDC1-201ENST00000371429 LAMA3Q16787 3333 aa9.71□□□□□ -0.86
NDC1-201ENST00000371429 A0A0U1RQV1 116 aa9.71□□□□□ -0.86
NDC1-201ENST00000371429 AKAP13Q12802 2813 aa9.71□□□□□ -0.86
NDC1-201ENST00000371429 LOC110117498A0A087WWA1 95 aa9.7□□□□□ -0.86
NDC1-201ENST00000371429 SMCPP49901 116 aaPredicted RBP9.7□□□□□ -0.86
NDC1-201ENST00000371429 MGAQ8IWI9 3026 aa9.7□□□□□ -0.86
NDC1-201ENST00000371429 C7orf65Q6ZTY9 151 aa9.7□□□□□ -0.86
NDC1-201ENST00000371429 ZNF861PO60384 105 aa9.69□□□□□ -0.86
NDC1-201ENST00000371429 Q96NJ1 140 aa9.68□□□□□ -0.86
NDC1-201ENST00000371429 ATP11AUNQ6ZP68 121 aa9.68□□□□□ -0.86
NDC1-201ENST00000371429 TRBV7-4A0A0J9YYF1 115 aa9.67□□□□□ -0.86
NDC1-201ENST00000371429 A0A0C4DFX4 3053 aa9.67□□□□□ -0.86
NDC1-201ENST00000371429 CDIP1Q9H305 208 aa9.66□□□□□ -0.86
NDC1-201ENST00000371429 LINC00528Q8N1L1 170 aa9.66□□□□□ -0.86
NDC1-201ENST00000371429 C9orf129Q5T035 196 aaKnown RBP9.66□□□□□ -0.86
NDC1-201ENST00000371429 TRANK1O15050 2925 aa9.65□□□□□ -0.86
NDC1-201ENST00000371429 ZNF575Q86XF7 245 aa9.64□□□□□ -0.87
NDC1-201ENST00000371429 CASC10Q5T4H9 136 aa9.64□□□□□ -0.87
NDC1-201ENST00000371429 PRO0461Q9UI25 63 aa9.64□□□□□ -0.87
NDC1-201ENST00000371429 TLX1NBP0CAT3 122 aa9.63□□□□□ -0.87
NDC1-201ENST00000371429 LINC00304Q8N9R0 145 aa9.63□□□□□ -0.87
NDC1-201ENST00000371429 SSBP3-AS1Q7Z2R9 100 aa9.63□□□□□ -0.87
NDC1-201ENST00000371429 BAHCC1Q9P281 2608 aa9.62□□□□□ -0.87
NDC1-201ENST00000371429 UNC79Q9P2D8 2635 aa9.62□□□□□ -0.87
NDC1-201ENST00000371429 EIF4EBP3O60516 100 aaPredicted RBP9.62□□□□□ -0.87
NDC1-201ENST00000371429 MKI67P46013 3256 aaKnown RBP9.62□□□□□ -0.87
NDC1-201ENST00000371429 CHD6Q8TD26 2715 aa9.61□□□□□ -0.87
NDC1-201ENST00000371429 TRAV22A0A0B4J277 110 aa9.61□□□□□ -0.87
NDC1-201ENST00000371429 C8orf87E5RJ46 101 aa9.6□□□□□ -0.87
NDC1-201ENST00000371429 SPAG11AQ6PDA7 123 aa9.6□□□□□ -0.87
NDC1-201ENST00000371429 DSPP15924 2871 aaKnown RBP9.6□□□□□ -0.87
NDC1-201ENST00000371429 ACYP2P14621 99 aa9.59□□□□□ -0.87
NDC1-201ENST00000371429 CNBPP62633 177 aaKnown RBP9.59□□□□□ -0.87
NDC1-201ENST00000371429 PSPHP1O15172 72 aa9.59□□□□□ -0.87
NDC1-201ENST00000371429 A0A1W2PNN7 141 aa9.58□□□□□ -0.88
NDC1-201ENST00000371429 A8MWP4 228 aa9.58□□□□□ -0.88
NDC1-201ENST00000371429 PSORS1C2Q9UIG4 136 aa9.58□□□□□ -0.88
NDC1-201ENST00000371429 PLA2G2DQ9UNK4 145 aa9.58□□□□□ -0.88
NDC1-201ENST00000371429 IGLV7-43P04211 117 aa9.58□□□□□ -0.88
NDC1-201ENST00000371429 IGFL1Q6UW32 110 aa9.57□□□□□ -0.88
NDC1-201ENST00000371429 H3BPC8 53 aa9.56□□□□□ -0.88
NDC1-201ENST00000371429 ANAPC11Q9NYG5 84 aa9.55□□□□□ -0.88
NDC1-201ENST00000371429 WDFY4Q6ZS81 3184 aa9.55□□□□□ -0.88
NDC1-201ENST00000371429 WIPF1O43516 503 aa9.55□□□□□ -0.88
NDC1-201ENST00000371429 NOTCH1P46531 2555 aa9.55□□□□□ -0.88
NDC1-201ENST00000371429 COX6B2Q6YFQ2 88 aa9.54□□□□□ -0.88
NDC1-201ENST00000371429 MRPL34Q9BQ48 92 aaKnown RBP9.54□□□□□ -0.88
NDC1-201ENST00000371429 IGSF10Q6WRI0 2623 aa9.54□□□□□ -0.88
NDC1-201ENST00000371429 TNP2Q05952 138 aa9.54□□□□□ -0.88
NDC1-201ENST00000371429 BRCA2P51587 3418 aa9.53□□□□□ -0.88
NDC1-201ENST00000371429 Q8N377 158 aa9.53□□□□□ -0.88
NDC1-201ENST00000371429 K7EQZ3 153 aa9.52□□□□□ -0.88
NDC1-201ENST00000371429 PRUNE2Q8WUY3 3088 aa9.51□□□□□ -0.89
NDC1-201ENST00000371429 A0A1B0GU69 56 aa9.51□□□□□ -0.89
NDC1-201ENST00000371429 CFAP54Q96N23 3096 aa9.5□□□□□ -0.89
NDC1-201ENST00000371429 LOC101927531A0A1B0GV80 90 aa9.5□□□□□ -0.89
NDC1-201ENST00000371429 DSCR10P59022 87 aa9.5□□□□□ -0.89
NDC1-201ENST00000371429 OBSCN-AS1Q96MR7 158 aa9.49□□□□□ -0.89
NDC1-201ENST00000371429 A0A0G2JQZ4 141 aa9.48□□□□□ -0.89
NDC1-201ENST00000371429 C9orf92A6NGG3 77 aa9.48□□□□□ -0.89
NDC1-201ENST00000371429 MAP1AP78559 2803 aaPredicted RBP9.48□□□□□ -0.89
NDC1-201ENST00000371429 CR1P17927 2039 aa9.48□□□□□ -0.89
NDC1-201ENST00000371429 SPRR4Q96PI1 79 aa9.47□□□□□ -0.89
NDC1-201ENST00000371429 NBEAL1Q6ZS30 2694 aa9.47□□□□□ -0.89
NDC1-201ENST00000371429 PMAIP1Q13794 54 aa9.47□□□□□ -0.89
NDC1-201ENST00000371429 C8orf17Q9NRJ1 99 aa9.46□□□□□ -0.9
NDC1-201ENST00000371429 ERC2-IT1O76042 136 aa9.45□□□□□ -0.9
NDC1-201ENST00000371429 PRR15Q8IV56 129 aa9.45□□□□□ -0.9
NDC1-201ENST00000371429 A0A1B0GVX0 72 aa9.44□□□□□ -0.9
NDC1-201ENST00000371429 TRIOO75962 3097 aa9.43□□□□□ -0.9
NDC1-201ENST00000371429 UBR5O95071 2799 aaPredicted RBP9.4□□□□□ -0.9
NDC1-201ENST00000371429 LAMA2P24043 3122 aaKnown RBP9.39□□□□□ -0.91
NDC1-201ENST00000371429 IGLV5-37A0A075B6J1 123 aa9.39□□□□□ -0.91
NDC1-201ENST00000371429 GCN1Q92616 2671 aaKnown RBP9.38□□□□□ -0.91
NDC1-201ENST00000371429 C1orf195Q5TG92 126 aa9.38□□□□□ -0.91
NDC1-201ENST00000371429 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.36□□□□□ -0.91
NDC1-201ENST00000371429 IGLV8-61A0A075B6I0 122 aa9.35□□□□□ -0.91
NDC1-201ENST00000371429 A0A1W2PNM2 257 aa9.33□□□□□ -0.92
NDC1-201ENST00000371429 XIRP2A4UGR9 3374 aa9.29□□□□□ -0.92
NDC1-201ENST00000371429 RBM12B-AS1Q9P1G2 102 aa9.28□□□□□ -0.92
NDC1-201ENST00000371429 PRR26Q8N8Z3 221 aa9.28□□□□□ -0.92
NDC1-201ENST00000371429 UNC80Q8N2C7 3258 aa9.27□□□□□ -0.93
NDC1-201ENST00000371429 IGLV5-48A0A075B6I7 105 aa9.25□□□□□ -0.93
NDC1-201ENST00000371429 NSD1Q96L73 2696 aaPredicted RBP9.25□□□□□ -0.93
NDC1-201ENST00000371429 LINC01600Q96MT4 127 aa9.24□□□□□ -0.93
NDC1-201ENST00000371429 COA5Q86WW8 74 aa9.24□□□□□ -0.93
NDC1-201ENST00000371429 FAM104AQ969W3 186 aa9.23□□□□□ -0.93
NDC1-201ENST00000371429 PLAC8Q9NZF1 115 aa9.22□□□□□ -0.93
NDC1-201ENST00000371429 IGLV7-46A0A075B6I9 117 aa9.22□□□□□ -0.93
NDC1-201ENST00000371429 FLNCQ14315 2725 aa9.22□□□□□ -0.93
NDC1-201ENST00000371429 CD164Q04900 197 aa9.21□□□□□ -0.94
NDC1-201ENST00000371429 VPS13AQ96RL7 3174 aa9.21□□□□□ -0.94
NDC1-201ENST00000371429 FRYQ5TBA9 3013 aa9.18□□□□□ -0.94
NDC1-201ENST00000371429 FAM229BQ4G0N7 80 aa9.18□□□□□ -0.94
NDC1-201ENST00000371429 LCE6AA0A183 80 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms