RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 DPY30Q9C005 99 aa-0.99□□□□□ -2.57
ECHDC1-201ENST00000368287 CLIP1P30622 1438 aa-0.99□□□□□ -2.57
ECHDC1-201ENST00000368287 QSER1Q2KHR3 1735 aa-1□□□□□ -2.57
ECHDC1-201ENST00000368287 PKHD1L1Q86WI1 4243 aa-1□□□□□ -2.57
ECHDC1-201ENST00000368287 UBR3Q6ZT12 1888 aa-1□□□□□ -2.57
ECHDC1-201ENST00000368287 MT1AP04731 61 aa-1□□□□□ -2.57
ECHDC1-201ENST00000368287 HIGD1BQ9P298 99 aa-1□□□□□ -2.57
ECHDC1-201ENST00000368287 PDE4DIPQ5VU43 2346 aa-1□□□□□ -2.57
ECHDC1-201ENST00000368287 PTPN23Q9H3S7 1636 aa-1□□□□□ -2.57
ECHDC1-201ENST00000368287 UQCRHLA0A096LP55 91 aa-1.01□□□□□ -2.57
ECHDC1-201ENST00000368287 LINC00032P0C843 101 aa-1.01□□□□□ -2.57
ECHDC1-201ENST00000368287 HMGN3Q15651 99 aa-1.01□□□□□ -2.57
ECHDC1-201ENST00000368287 ZNF720Q7Z2F6 126 aa-1.01□□□□□ -2.57
ECHDC1-201ENST00000368287 MUC17Q685J3 4493 aa-1.01□□□□□ -2.57
ECHDC1-201ENST00000368287 TEP1Q99973 2627 aaKnown RBP-1.02□□□□□ -2.57
ECHDC1-201ENST00000368287 ACBD7Q8N6N7 88 aa-1.02□□□□□ -2.57
ECHDC1-201ENST00000368287 DNAH3Q8TD57 4116 aa-1.02□□□□□ -2.57
ECHDC1-201ENST00000368287 VPS13DQ5THJ4 4388 aa-1.03□□□□□ -2.57
ECHDC1-201ENST00000368287 MAGI2Q86UL8 1455 aa-1.03□□□□□ -2.57
ECHDC1-201ENST00000368287 H0YGG7 62 aa-1.03□□□□□ -2.57
ECHDC1-201ENST00000368287 HTTP42858 3142 aa-1.03□□□□□ -2.57
ECHDC1-201ENST00000368287 RGPD1P0DJD0 1748 aa-1.03□□□□□ -2.58
ECHDC1-201ENST00000368287 LAMA1P25391 3075 aa-1.04□□□□□ -2.58
ECHDC1-201ENST00000368287 ALKAL2Q6UX46 152 aa-1.04□□□□□ -2.58
ECHDC1-201ENST00000368287 UBE2D4Q9Y2X8 147 aa-1.04□□□□□ -2.58
ECHDC1-201ENST00000368287 UBR1Q8IWV7 1749 aa-1.04□□□□□ -2.58
ECHDC1-201ENST00000368287 ANKRD26Q9UPS8 1709 aa-1.04□□□□□ -2.58
ECHDC1-201ENST00000368287 CICQ96RK0 1608 aaPredicted RBP-1.04□□□□□ -2.58
ECHDC1-201ENST00000368287 EPPK1P58107 5090 aaKnown RBP-1.05□□□□□ -2.58
ECHDC1-201ENST00000368287 ZZEF1O43149 2961 aa-1.05□□□□□ -2.58
ECHDC1-201ENST00000368287 PREX1Q8TCU6 1659 aa-1.05□□□□□ -2.58
ECHDC1-201ENST00000368287 CUBNO60494 3623 aa-1.05□□□□□ -2.58
ECHDC1-201ENST00000368287 HYDINQ4G0P3 5121 aa-1.05□□□□□ -2.58
ECHDC1-201ENST00000368287 RYR1P21817 5038 aa-1.06□□□□□ -2.58
ECHDC1-201ENST00000368287 AKAP9Q99996 3911 aa-1.06□□□□□ -2.58
ECHDC1-201ENST00000368287 KIAA1109Q2LD37 5005 aa-1.07□□□□□ -2.58
ECHDC1-201ENST00000368287 ACACAQ13085 2346 aa-1.07□□□□□ -2.58
ECHDC1-201ENST00000368287 COX7BP24311 80 aa-1.07□□□□□ -2.58
ECHDC1-201ENST00000368287 AKAP12Q02952 1782 aa-1.07□□□□□ -2.58
ECHDC1-201ENST00000368287 C4AP0C0L4 1744 aa-1.07□□□□□ -2.58
ECHDC1-201ENST00000368287 C4BP0C0L5 1744 aa-1.07□□□□□ -2.58
ECHDC1-201ENST00000368287 ABCC10Q5T3U5 1492 aa-1.07□□□□□ -2.58
ECHDC1-201ENST00000368287 LAMA2P24043 3122 aaKnown RBP-1.07□□□□□ -2.58
ECHDC1-201ENST00000368287 TROQ12816 1431 aaPredicted RBP-1.07□□□□□ -2.58
ECHDC1-201ENST00000368287 ALKQ9UM73 1620 aa-1.07□□□□□ -2.58
ECHDC1-201ENST00000368287 H3BNG1 76 aa-1.08□□□□□ -2.58
ECHDC1-201ENST00000368287 M0R143 59 aa-1.08□□□□□ -2.58
ECHDC1-201ENST00000368287 EPRSP07814 1512 aaKnown RBP-1.09□□□□□ -2.58
ECHDC1-201ENST00000368287 LRRC7Q96NW7 1537 aa-1.09□□□□□ -2.58
ECHDC1-201ENST00000368287 NDUFA3O95167 84 aa-1.09□□□□□ -2.58
ECHDC1-201ENST00000368287 DMXL1Q9Y485 3027 aa-1.1□□□□□ -2.58
ECHDC1-201ENST00000368287 FANCAO15360 1455 aa-1.1□□□□□ -2.59
ECHDC1-201ENST00000368287 C20orf78Q9BR46 151 aa-1.1□□□□□ -2.59
ECHDC1-201ENST00000368287 SNHG12Q9BXW3 62 aa-1.1□□□□□ -2.59
ECHDC1-201ENST00000368287 ATP10BO94823 1461 aa-1.11□□□□□ -2.59
ECHDC1-201ENST00000368287 SUPT6HQ7KZ85 1726 aaKnown RBP-1.11□□□□□ -2.59
ECHDC1-201ENST00000368287 BIRC6Q9NR09 4857 aa-1.11□□□□□ -2.59
ECHDC1-201ENST00000368287 ANKRD11Q6UB99 2663 aaPredicted RBP-1.12□□□□□ -2.59
ECHDC1-201ENST00000368287 HMGN2P05204 90 aaKnown RBP-1.12□□□□□ -2.59
ECHDC1-201ENST00000368287 NMSQ5H8A3 153 aa-1.12□□□□□ -2.59
ECHDC1-201ENST00000368287 MGAM2Q2M2H8 2515 aa-1.12□□□□□ -2.59
ECHDC1-201ENST00000368287 APOBP04114 4563 aaKnown RBP-1.13□□□□□ -2.59
ECHDC1-201ENST00000368287 RGPD8O14715 1765 aaPredicted RBP-1.13□□□□□ -2.59
ECHDC1-201ENST00000368287 RGPD4Q7Z3J3 1758 aa-1.13□□□□□ -2.59
ECHDC1-201ENST00000368287 RGPD5Q99666 1765 aa-1.13□□□□□ -2.59
ECHDC1-201ENST00000368287 MYO3AQ8NEV4 1616 aa-1.13□□□□□ -2.59
ECHDC1-201ENST00000368287 C9orf92A6NGG3 77 aa-1.13□□□□□ -2.59
ECHDC1-201ENST00000368287 NEXMIFQ5QGS0 1516 aa-1.14□□□□□ -2.59
ECHDC1-201ENST00000368287 A0A1B0GUT8 65 aa-1.14□□□□□ -2.59
ECHDC1-201ENST00000368287 IQCF6A8MYZ5 107 aa-1.14□□□□□ -2.59
ECHDC1-201ENST00000368287 GAFA1Q96PS6 74 aa-1.14□□□□□ -2.59
ECHDC1-201ENST00000368287 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.14□□□□□ -2.59
ECHDC1-201ENST00000368287 VPS13BQ7Z7G8 4022 aa-1.14□□□□□ -2.59
ECHDC1-201ENST00000368287 MTORP42345 2549 aa-1.15□□□□□ -2.59
ECHDC1-201ENST00000368287 NIPBLQ6KC79 2804 aaeCLIP-1.15□□□□□ -2.59
ECHDC1-201ENST00000368287 ANK3Q12955 4377 aaKnown RBP-1.15□□□□□ -2.59
ECHDC1-201ENST00000368287 RGPD3A6NKT7 1758 aaPredicted RBP-1.15□□□□□ -2.59
ECHDC1-201ENST00000368287 LRRC9Q6ZRR7 1453 aa-1.15□□□□□ -2.59
ECHDC1-201ENST00000368287 DNAH2Q9P225 4427 aa-1.15□□□□□ -2.59
ECHDC1-201ENST00000368287 DEFA5Q01523 94 aa-1.15□□□□□ -2.59
ECHDC1-201ENST00000368287 SCN11AQ9UI33 1791 aa-1.16□□□□□ -2.59
ECHDC1-201ENST00000368287 ATP7BP35670 1465 aa-1.16□□□□□ -2.59
ECHDC1-201ENST00000368287 PLGLAQ15195 96 aa-1.16□□□□□ -2.6
ECHDC1-201ENST00000368287 POLR1AO95602 1720 aaPredicted RBP-1.16□□□□□ -2.6
ECHDC1-201ENST00000368287 ANKRD50Q9ULJ7 1429 aa-1.16□□□□□ -2.6
ECHDC1-201ENST00000368287 PKD1L2Q7Z442 2459 aa-1.16□□□□□ -2.6
ECHDC1-201ENST00000368287 DNAH11Q96DT5 4516 aa-1.17□□□□□ -2.6
ECHDC1-201ENST00000368287 TIAM2Q8IVF5 1701 aa-1.17□□□□□ -2.6
ECHDC1-201ENST00000368287 MT1HP80294 61 aa-1.17□□□□□ -2.6
ECHDC1-201ENST00000368287 VPS8Q8N3P4 1428 aa-1.17□□□□□ -2.6
ECHDC1-201ENST00000368287 DSPP15924 2871 aaKnown RBP-1.18□□□□□ -2.6
ECHDC1-201ENST00000368287 GYPAP02724 150 aa-1.18□□□□□ -2.6
ECHDC1-201ENST00000368287 PEA15Q15121 130 aa-1.18□□□□□ -2.6
ECHDC1-201ENST00000368287 COX6B2Q6YFQ2 88 aa-1.18□□□□□ -2.6
ECHDC1-201ENST00000368287 CCDC168Q8NDH2 2452 aa-1.18□□□□□ -2.6
ECHDC1-201ENST00000368287 LAMA3Q16787 3333 aa-1.18□□□□□ -2.6
ECHDC1-201ENST00000368287 LTN1O94822 1766 aa-1.19□□□□□ -2.6
ECHDC1-201ENST00000368287 TEX15Q9BXT5 2789 aa-1.19□□□□□ -2.6
ECHDC1-201ENST00000368287 FAM186AA6NE01 2351 aa-1.19□□□□□ -2.6
ECHDC1-201ENST00000368287 TRAV21A0A0B4J279 112 aa-1.19□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms