RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 NCOR2Q9Y618 2525 aa10.94□□□□□ -0.66
NID1-202ENST00000366595 IGLV5-48A0A075B6I7 105 aa10.94□□□□□ -0.66
NID1-202ENST00000366595 PIEZO2Q9H5I5 2752 aa10.94□□□□□ -0.66
NID1-202ENST00000366595 PIEZO1Q92508 2521 aa10.93□□□□□ -0.66
NID1-202ENST00000366595 TLN2Q9Y4G6 2542 aa10.93□□□□□ -0.66
NID1-202ENST00000366595 PTPRBP23467 1997 aa10.93□□□□□ -0.66
NID1-202ENST00000366595 LRRK2Q5S007 2527 aa10.92□□□□□ -0.66
NID1-202ENST00000366595 IGF2RP11717 2491 aa10.92□□□□□ -0.66
NID1-202ENST00000366595 C9orf92A6NGG3 77 aa10.92□□□□□ -0.66
NID1-202ENST00000366595 CSNK1G2-AS1Q8NCQ2 148 aa10.91□□□□□ -0.66
NID1-202ENST00000366595 A0A1W2PNM2 257 aa10.91□□□□□ -0.66
NID1-202ENST00000366595 C9orf163Q8N9P6 203 aa10.91□□□□□ -0.66
NID1-202ENST00000366595 KRTAP24-1Q3LI83 254 aa10.9□□□□□ -0.67
NID1-202ENST00000366595 SPRR4Q96PI1 79 aa10.89□□□□□ -0.67
NID1-202ENST00000366595 Q75L30 129 aa10.89□□□□□ -0.67
NID1-202ENST00000366595 IGLV7-43P04211 117 aa10.87□□□□□ -0.67
NID1-202ENST00000366595 A0A0A0MQY5 61 aa10.87□□□□□ -0.67
NID1-202ENST00000366595 USP9XQ93008 2570 aaPredicted RBP10.86□□□□□ -0.67
NID1-202ENST00000366595 OCR1Q9BZK8 76 aa10.86□□□□□ -0.67
NID1-202ENST00000366595 TLN1Q9Y490 2541 aaKnown RBP10.86□□□□□ -0.67
NID1-202ENST00000366595 Q8N1X5 172 aa10.85□□□□□ -0.67
NID1-202ENST00000366595 PKD1L2Q7Z442 2459 aa10.85□□□□□ -0.67
NID1-202ENST00000366595 LINC00612Q8N6U2 182 aa10.84□□□□□ -0.67
NID1-202ENST00000366595 ZFYVE26Q68DK2 2539 aa10.84□□□□□ -0.67
NID1-202ENST00000366595 IGLV7-46A0A075B6I9 117 aa10.84□□□□□ -0.67
NID1-202ENST00000366595 A0A1B0GU33 70 aa10.83□□□□□ -0.68
NID1-202ENST00000366595 A0A087WTM6 91 aa10.83□□□□□ -0.68
NID1-202ENST00000366595 PRR26Q8N8Z3 221 aa10.81□□□□□ -0.68
NID1-202ENST00000366595 WDR87Q6ZQQ6 2873 aa10.81□□□□□ -0.68
NID1-202ENST00000366595 A0A0G2JQZ4 141 aa10.81□□□□□ -0.68
NID1-202ENST00000366595 A0A1W2PNN7 141 aa10.81□□□□□ -0.68
NID1-202ENST00000366595 CNBPP62633 177 aaKnown RBP10.8□□□□□ -0.68
NID1-202ENST00000366595 CAMK2N1Q7Z7J9 78 aa10.77□□□□□ -0.68
NID1-202ENST00000366595 DMAC1Q96GE9 116 aa10.77□□□□□ -0.69
NID1-202ENST00000366595 C19orf73Q9NVV2 129 aa10.77□□□□□ -0.69
NID1-202ENST00000366595 PSORS1C2Q9UIG4 136 aa10.77□□□□□ -0.69
NID1-202ENST00000366595 LINC01558Q9Y6Z2 57 aa10.77□□□□□ -0.69
NID1-202ENST00000366595 ZNF575Q86XF7 245 aa10.76□□□□□ -0.69
NID1-202ENST00000366595 H3BS24 57 aa10.73□□□□□ -0.69
NID1-202ENST00000366595 COL27A1Q8IZC6 1860 aaPredicted RBP10.73□□□□□ -0.69
NID1-202ENST00000366595 ANAPC11Q9NYG5 84 aa10.71□□□□□ -0.69
NID1-202ENST00000366595 HRES1P13985 223 aa10.68□□□□□ -0.7
NID1-202ENST00000366595 SETD2Q9BYW2 2564 aaPredicted RBP10.67□□□□□ -0.7
NID1-202ENST00000366595 GIG44P09565 113 aaPredicted RBP10.67□□□□□ -0.7
NID1-202ENST00000366595 Q8N9P0 234 aaPredicted RBP10.67□□□□□ -0.7
NID1-202ENST00000366595 K7EIL1 84 aa10.66□□□□□ -0.7
NID1-202ENST00000366595 Q6ZSA8 131 aa10.64□□□□□ -0.71
NID1-202ENST00000366595 COL4A2P08572 1712 aa10.63□□□□□ -0.71
NID1-202ENST00000366595 USP9YO00507 2555 aaPredicted RBP10.63□□□□□ -0.71
NID1-202ENST00000366595 KRTAP10-11P60412 298 aa10.61□□□□□ -0.71
NID1-202ENST00000366595 Q5XG85 94 aa10.6□□□□□ -0.71
NID1-202ENST00000366595 ACANP16112 2415 aa10.59□□□□□ -0.71
NID1-202ENST00000366595 SMR3BP02814 79 aaPredicted RBP10.58□□□□□ -0.72
NID1-202ENST00000366595 CSAG1Q6PB30 78 aa10.55□□□□□ -0.72
NID1-202ENST00000366595 PRAC1Q96KF2 57 aa10.55□□□□□ -0.72
NID1-202ENST00000366595 FAM229BQ4G0N7 80 aa10.55□□□□□ -0.72
NID1-202ENST00000366595 MMP24-AS1A0A0U1RRL7 71 aa10.52□□□□□ -0.72
NID1-202ENST00000366595 ZCCHC13Q8WW36 166 aaKnown RBP10.52□□□□□ -0.73
NID1-202ENST00000366595 CASC10Q5T4H9 136 aa10.52□□□□□ -0.73
NID1-202ENST00000366595 Q5VV11 94 aa10.52□□□□□ -0.73
NID1-202ENST00000366595 FP248Q71RG6 208 aaPredicted RBP10.51□□□□□ -0.73
NID1-202ENST00000366595 CENPFP49454 3210 aa10.49□□□□□ -0.73
NID1-202ENST00000366595 SPINK7P58062 85 aa10.49□□□□□ -0.73
NID1-202ENST00000366595 EP400Q96L91 3159 aa10.48□□□□□ -0.73
NID1-202ENST00000366595 TNP2Q05952 138 aa10.48□□□□□ -0.73
NID1-202ENST00000366595 S4R3F8 94 aa10.47□□□□□ -0.73
NID1-202ENST00000366595 ASB16-AS1Q495Z4 193 aa10.46□□□□□ -0.74
NID1-202ENST00000366595 MTORP42345 2549 aa10.45□□□□□ -0.74
NID1-202ENST00000366595 A0A096LNT2 108 aa10.43□□□□□ -0.74
NID1-202ENST00000366595 ROMO1P60602 79 aa10.41□□□□□ -0.74
NID1-202ENST00000366595 RPL37P61927 97 aaKnown RBP10.4□□□□□ -0.74
NID1-202ENST00000366595 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.4□□□□□ -0.75
NID1-202ENST00000366595 Q5W150 140 aa10.39□□□□□ -0.75
NID1-202ENST00000366595 KRTAP10-3P60369 221 aa10.37□□□□□ -0.75
NID1-202ENST00000366595 R4GN34 69 aa10.37□□□□□ -0.75
NID1-202ENST00000366595 CHD8Q9HCK8 2581 aa10.37□□□□□ -0.75
NID1-202ENST00000366595 SPRR1BP22528 89 aa10.35□□□□□ -0.75
NID1-202ENST00000366595 SPRR1AP35321 89 aa10.35□□□□□ -0.75
NID1-202ENST00000366595 M0R2T5 61 aa10.35□□□□□ -0.75
NID1-202ENST00000366595 ANKRD11Q6UB99 2663 aaPredicted RBP10.34□□□□□ -0.75
NID1-202ENST00000366595 CR1P17927 2039 aa10.33□□□□□ -0.76
NID1-202ENST00000366595 LINC00472Q9H8W2 130 aa10.32□□□□□ -0.76
NID1-202ENST00000366595 PLAC8Q9NZF1 115 aa10.29□□□□□ -0.76
NID1-202ENST00000366595 ANKRD17O75179 2603 aaKnown RBP10.28□□□□□ -0.76
NID1-202ENST00000366595 CYSTM1Q9H1C7 97 aa10.28□□□□□ -0.76
NID1-202ENST00000366595 CEP295Q9C0D2 2601 aa10.26□□□□□ -0.77
NID1-202ENST00000366595 PCSK5Q92824 1860 aa10.25□□□□□ -0.77
NID1-202ENST00000366595 H1FX-AS1Q4G0G2 97 aa10.24□□□□□ -0.77
NID1-202ENST00000366595 GOLGB1Q14789 3259 aaKnown RBP10.22□□□□□ -0.77
NID1-202ENST00000366595 KRTAP16-1A8MUX0 517 aa10.21□□□□□ -0.78
NID1-202ENST00000366595 SEC61BP60468 96 aaKnown RBP10.18□□□□□ -0.78
NID1-202ENST00000366595 POLQO75417 2590 aa10.13□□□□□ -0.79
NID1-202ENST00000366595 M0QZ58 72 aa10.12□□□□□ -0.79
NID1-202ENST00000366595 OXTP01178 125 aa10.11□□□□□ -0.79
NID1-202ENST00000366595 Q6ZR54 194 aa10.11□□□□□ -0.79
NID1-202ENST00000366595 KRTAP26-1Q6PEX3 210 aa10.1□□□□□ -0.79
NID1-202ENST00000366595 SPTBN4Q9H254 2564 aa10.1□□□□□ -0.79
NID1-202ENST00000366595 Q8NDZ9 215 aa10.09□□□□□ -0.79
NID1-202ENST00000366595 SPATA8Q6RVD6 105 aa10.05□□□□□ -0.8
NID1-202ENST00000366595 PLAC4Q8WY50 150 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms