RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 LINC01546A6NGU7 62 aa2.9□□□□□ -1.95
RNU4-4P-201ENST00000364588 LINC01549A6NIU2 74 aa2.9□□□□□ -1.95
RNU4-4P-201ENST00000364588 IGLC3P0DOY3 106 aa2.9□□□□□ -1.95
RNU4-4P-201ENST00000364588 CTAG1AP78358 180 aa2.9□□□□□ -1.95
RNU4-4P-201ENST00000364588 SPAG11AQ6PDA7 123 aa2.9□□□□□ -1.95
RNU4-4P-201ENST00000364588 LINC00337Q8N6G1 96 aa2.9□□□□□ -1.95
RNU4-4P-201ENST00000364588 SPRR4Q96PI1 79 aa2.9□□□□□ -1.95
RNU4-4P-201ENST00000364588 GNB1LQ9BYB4 327 aa2.9□□□□□ -1.95
RNU4-4P-201ENST00000364588 TRAV9-1A0A075B6T8 112 aa2.89□□□□□ -1.95
RNU4-4P-201ENST00000364588 A0A096LNJ9 63 aa2.89□□□□□ -1.95
RNU4-4P-201ENST00000364588 C11orf86A6NJI1 115 aa2.89□□□□□ -1.95
RNU4-4P-201ENST00000364588 LINC00158P58513 81 aa2.89□□□□□ -1.95
RNU4-4P-201ENST00000364588 FABP9Q0Z7S8 132 aa2.89□□□□□ -1.95
RNU4-4P-201ENST00000364588 COX17Q14061 63 aa2.89□□□□□ -1.95
RNU4-4P-201ENST00000364588 PMCHL1Q16048 86 aa2.89□□□□□ -1.95
RNU4-4P-201ENST00000364588 TMEM170BQ5T4T1 132 aa2.89□□□□□ -1.95
RNU4-4P-201ENST00000364588 FP248Q71RG6 208 aaPredicted RBP2.89□□□□□ -1.95
RNU4-4P-201ENST00000364588 KRTAP4-1Q9BYQ7 146 aa2.89□□□□□ -1.95
RNU4-4P-201ENST00000364588 NCR3O14931 201 aa2.88□□□□□ -1.95
RNU4-4P-201ENST00000364588 S100PP25815 95 aa2.88□□□□□ -1.95
RNU4-4P-201ENST00000364588 ASB16-AS1Q495Z4 193 aa2.88□□□□□ -1.95
RNU4-4P-201ENST00000364588 BAGE3Q86Y29 109 aa2.88□□□□□ -1.95
RNU4-4P-201ENST00000364588 SMCR5Q8TEV8 140 aa2.88□□□□□ -1.95
RNU4-4P-201ENST00000364588 ZNF706Q9Y5V0 76 aaPredicted RBP2.88□□□□□ -1.95
RNU4-4P-201ENST00000364588 TMEM218A2RU14 115 aa2.87□□□□□ -1.95
RNU4-4P-201ENST00000364588 HBDP02042 147 aa2.87□□□□□ -1.95
RNU4-4P-201ENST00000364588 SMIM13P0DJ93 91 aa2.87□□□□□ -1.95
RNU4-4P-201ENST00000364588 BOD1L2Q8IYS8 172 aa2.87□□□□□ -1.95
RNU4-4P-201ENST00000364588 ETDCA0A1B0GVM5 59 aa2.86□□□□□ -1.95
RNU4-4P-201ENST00000364588 ATP6V1G1O75348 118 aa2.86□□□□□ -1.95
RNU4-4P-201ENST00000364588 SPINK1P00995 79 aa2.86□□□□□ -1.95
RNU4-4P-201ENST00000364588 LINC00614P0C842 121 aa2.86□□□□□ -1.95
RNU4-4P-201ENST00000364588 MOBPQ13875 183 aa2.86□□□□□ -1.95
RNU4-4P-201ENST00000364588 COX19Q49B96 90 aa2.86□□□□□ -1.95
RNU4-4P-201ENST00000364588 MEIG1Q5JSS6 88 aa2.86□□□□□ -1.95
RNU4-4P-201ENST00000364588 CLLU1Q5K131 121 aa2.86□□□□□ -1.95
RNU4-4P-201ENST00000364588 SFTA2Q6UW10 78 aa2.86□□□□□ -1.95
RNU4-4P-201ENST00000364588 MIR7-3HGQ8N6C7 128 aa2.86□□□□□ -1.95
RNU4-4P-201ENST00000364588 C18orf32Q8TCD1 76 aa2.86□□□□□ -1.95
RNU4-4P-201ENST00000364588 SEC11CQ9BY50 192 aa2.86□□□□□ -1.95
RNU4-4P-201ENST00000364588 CHTOPQ9Y3Y2 248 aaKnown RBP2.86□□□□□ -1.95
RNU4-4P-201ENST00000364588 TRBV10-3A0A0K0K1G6 114 aa2.85□□□□□ -1.95
RNU4-4P-201ENST00000364588 TMEM223A0PJW6 202 aa2.85□□□□□ -1.95
RNU4-4P-201ENST00000364588 KRTAP4-16G5E9R7 235 aaPredicted RBP2.85□□□□□ -1.95
RNU4-4P-201ENST00000364588 ERC2-IT1O76042 136 aa2.85□□□□□ -1.95
RNU4-4P-201ENST00000364588 SPRR1AP35321 89 aa2.85□□□□□ -1.95
RNU4-4P-201ENST00000364588 UQCC3Q6UW78 93 aa2.85□□□□□ -1.95
RNU4-4P-201ENST00000364588 KCNQ1DNQ9H478 68 aa2.85□□□□□ -1.95
RNU4-4P-201ENST00000364588 CRCT1Q9UGL9 99 aa2.85□□□□□ -1.95
RNU4-4P-201ENST00000364588 NDUFA12Q9UI09 145 aa2.85□□□□□ -1.95
RNU4-4P-201ENST00000364588 TRAPPC1Q9Y5R8 145 aa2.85□□□□□ -1.95
RNU4-4P-201ENST00000364588 LINC00483Q53H64 154 aa2.84□□□□□ -1.95
RNU4-4P-201ENST00000364588 FSIP2Q5CZC0 6907 aa2.84□□□□□ -1.95
RNU4-4P-201ENST00000364588 SLC25A20O43772 301 aa2.83□□□□□ -1.96
RNU4-4P-201ENST00000364588 S100A12P80511 92 aa2.83□□□□□ -1.96
RNU4-4P-201ENST00000364588 SSBP3-AS1Q7Z2R9 100 aa2.83□□□□□ -1.96
RNU4-4P-201ENST00000364588 FAM19A2Q8N3H0 131 aa2.83□□□□□ -1.96
RNU4-4P-201ENST00000364588 IFI27L1Q96BM0 104 aa2.83□□□□□ -1.96
RNU4-4P-201ENST00000364588 Q9BRP9 147 aa2.83□□□□□ -1.96
RNU4-4P-201ENST00000364588 H0Y8G0 127 aa2.82□□□□□ -1.96
RNU4-4P-201ENST00000364588 DDTP30046 118 aa2.82□□□□□ -1.96
RNU4-4P-201ENST00000364588 TSPEAR-AS2P59090 65 aa2.82□□□□□ -1.96
RNU4-4P-201ENST00000364588 RPS29P62273 56 aaKnown RBP2.82□□□□□ -1.96
RNU4-4P-201ENST00000364588 HERV-K104P63124 156 aa2.82□□□□□ -1.96
RNU4-4P-201ENST00000364588 IFITM2Q01629 132 aa2.82□□□□□ -1.96
RNU4-4P-201ENST00000364588 RHEBQ15382 184 aa2.82□□□□□ -1.96
RNU4-4P-201ENST00000364588 C9orf153Q5TBE3 101 aa2.82□□□□□ -1.96
RNU4-4P-201ENST00000364588 COMMD7Q86VX2 200 aa2.82□□□□□ -1.96
RNU4-4P-201ENST00000364588 LINC00518Q8N0U6 118 aa2.82□□□□□ -1.96
RNU4-4P-201ENST00000364588 MAP1LC3CQ9BXW4 147 aa2.82□□□□□ -1.96
RNU4-4P-201ENST00000364588 TRAV12-1A0A0B4J245 112 aa2.81□□□□□ -1.96
RNU4-4P-201ENST00000364588 MYMXA0A1B0GTQ4 84 aa2.81□□□□□ -1.96
RNU4-4P-201ENST00000364588 LINC00587B1AMM8 73 aa2.81□□□□□ -1.96
RNU4-4P-201ENST00000364588 C10orf91Q5T1B1 145 aa2.81□□□□□ -1.96
RNU4-4P-201ENST00000364588 Q6ZRX8 168 aa2.81□□□□□ -1.96
RNU4-4P-201ENST00000364588 ST20-AS1Q8NBB2 130 aa2.81□□□□□ -1.96
RNU4-4P-201ENST00000364588 IGLV8-61A0A075B6I0 122 aa2.8□□□□□ -1.96
RNU4-4P-201ENST00000364588 TRBV10-2A0A0K0K1G8 114 aa2.8□□□□□ -1.96
RNU4-4P-201ENST00000364588 C9orf92A6NGG3 77 aa2.8□□□□□ -1.96
RNU4-4P-201ENST00000364588 NPC2P61916 151 aa2.8□□□□□ -1.96
RNU4-4P-201ENST00000364588 MT1HP80294 61 aa2.8□□□□□ -1.96
RNU4-4P-201ENST00000364588 KRTAP19-2Q3LHN2 52 aa2.8□□□□□ -1.96
RNU4-4P-201ENST00000364588 PCOTHQ58A44 107 aa2.8□□□□□ -1.96
RNU4-4P-201ENST00000364588 S100A7L2Q5SY68 101 aa2.8□□□□□ -1.96
RNU4-4P-201ENST00000364588 HRCT1Q6UXD1 115 aa2.8□□□□□ -1.96
RNU4-4P-201ENST00000364588 CHCHD1Q96BP2 118 aaKnown RBP2.8□□□□□ -1.96
RNU4-4P-201ENST00000364588 MIEN1Q9BRT3 115 aa2.8□□□□□ -1.96
RNU4-4P-201ENST00000364588 SPANXB1Q9NS25 103 aaPredicted RBP2.8□□□□□ -1.96
RNU4-4P-201ENST00000364588 TRAV23DV6A0A075B6W5 121 aa2.79□□□□□ -1.96
RNU4-4P-201ENST00000364588 LOC107984156A0A0G2JMH3 177 aa2.79□□□□□ -1.96
RNU4-4P-201ENST00000364588 A4D1N5 150 aa2.79□□□□□ -1.96
RNU4-4P-201ENST00000364588 LEPROTO15243 131 aa2.79□□□□□ -1.96
RNU4-4P-201ENST00000364588 HSBP1O75506 76 aa2.79□□□□□ -1.96
RNU4-4P-201ENST00000364588 SERF1AO75920 110 aa2.79□□□□□ -1.96
RNU4-4P-201ENST00000364588 IGLV6-57P01721 117 aa2.79□□□□□ -1.96
RNU4-4P-201ENST00000364588 APOC3P02656 99 aa2.79□□□□□ -1.96
RNU4-4P-201ENST00000364588 KRTAP5-5Q701N2 237 aaPredicted RBP2.79□□□□□ -1.96
RNU4-4P-201ENST00000364588 ARL17AQ8IVW1 177 aa2.79□□□□□ -1.96
RNU4-4P-201ENST00000364588 J3QQQ9 107 aa2.78□□□□□ -1.96
RNU4-4P-201ENST00000364588 ZNF73O43830 326 aaPredicted RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms