RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 C9JAW5 83 aa6.77□□□□□ -1.32
SNX6-201ENST00000362031 SRSF9Q13242 221 aaKnown RBP eCLIP6.77□□□□□ -1.321e-7■■■■□ 24.7
SNX6-201ENST00000362031 SCXQ7RTU7 201 aa6.77□□□□□ -1.32
SNX6-201ENST00000362031 TEN1Q86WV5 123 aa6.77□□□□□ -1.32
SNX6-201ENST00000362031 DPH3Q96FX2 82 aa6.77□□□□□ -1.32
SNX6-201ENST00000362031 VPREB1P12018 145 aa6.77□□□□□ -1.33
SNX6-201ENST00000362031 KRTAP11-1Q8IUC1 163 aa6.77□□□□□ -1.33
SNX6-201ENST00000362031 HIST1H4GQ99525 98 aa6.77□□□□□ -1.33
SNX6-201ENST00000362031 IGKV2-28A0A075B6P5 120 aa6.76□□□□□ -1.33
SNX6-201ENST00000362031 EPM2AB3EWF7 344 aa6.76□□□□□ -1.33
SNX6-201ENST00000362031 IGKV2D-28P01615 120 aa6.76□□□□□ -1.33
SNX6-201ENST00000362031 PLAC8Q9NZF1 115 aa6.76□□□□□ -1.33
SNX6-201ENST00000362031 PHF5AQ7RTV0 110 aaKnown RBP6.75□□□□□ -1.33
SNX6-201ENST00000362031 KRTAP17-1Q9BYP8 105 aa6.75□□□□□ -1.33
SNX6-201ENST00000362031 LINC00474Q9P2X8 69 aa6.75□□□□□ -1.33
SNX6-201ENST00000362031 C22orf24Q9Y442 160 aa6.75□□□□□ -1.33
SNX6-201ENST00000362031 TRBV20-1A0A075B6N2 111 aa6.74□□□□□ -1.33
SNX6-201ENST00000362031 NCR3O14931 201 aa6.74□□□□□ -1.33
SNX6-201ENST00000362031 FXYD2P54710 66 aa6.74□□□□□ -1.33
SNX6-201ENST00000362031 LYRM7Q5U5X0 104 aa6.74□□□□□ -1.33
SNX6-201ENST00000362031 SEC61GP60059 68 aa6.74□□□□□ -1.33
SNX6-201ENST00000362031 PLA2G2DQ9UNK4 145 aa6.74□□□□□ -1.33
SNX6-201ENST00000362031 CEND1Q8N111 149 aa6.73□□□□□ -1.33
SNX6-201ENST00000362031 LINC00337Q8N6G1 96 aa6.72□□□□□ -1.33
SNX6-201ENST00000362031 C7orf33Q8WU49 177 aa6.72□□□□□ -1.33
SNX6-201ENST00000362031 IGLV5-37A0A075B6J1 123 aa6.72□□□□□ -1.33
SNX6-201ENST00000362031 RPL37AP8A6NKH3 93 aa6.72□□□□□ -1.33
SNX6-201ENST00000362031 SMCPP49901 116 aaPredicted RBP6.72□□□□□ -1.33
SNX6-201ENST00000362031 LINC00167Q96N53 147 aa6.72□□□□□ -1.33
SNX6-201ENST00000362031 PKIGQ9Y2B9 76 aa6.72□□□□□ -1.33
SNX6-201ENST00000362031 SMR3BP02814 79 aaPredicted RBP6.71□□□□□ -1.33
SNX6-201ENST00000362031 NHP2Q9NX24 153 aaKnown RBP6.71□□□□□ -1.33
SNX6-201ENST00000362031 HERC2O95714 4834 aa6.71□□□□□ -1.34
SNX6-201ENST00000362031 NDUFC2O95298 119 aa6.71□□□□□ -1.34
SNX6-201ENST00000362031 MRPL55Q7Z7F7 128 aaKnown RBP6.71□□□□□ -1.34
SNX6-201ENST00000362031 PRO0628Q9UI54 55 aa6.71□□□□□ -1.34
SNX6-201ENST00000362031 CFC1BP0CG36 223 aa6.7□□□□□ -1.34
SNX6-201ENST00000362031 CFC1P0CG37 223 aa6.7□□□□□ -1.34
SNX6-201ENST00000362031 TRBV10-3A0A0K0K1G6 114 aa6.69□□□□□ -1.34
SNX6-201ENST00000362031 NKAPP1Q8N9T2 125 aa6.69□□□□□ -1.34
SNX6-201ENST00000362031 K7ERJ3 54 aa6.69□□□□□ -1.34
SNX6-201ENST00000362031 UQCRQO14949 82 aa6.69□□□□□ -1.34
SNX6-201ENST00000362031 M0R378 163 aa6.68□□□□□ -1.34
SNX6-201ENST00000362031 LINC01600Q96MT4 127 aa6.68□□□□□ -1.34
SNX6-201ENST00000362031 IGLV1-50A0A075B6I6 118 aa6.67□□□□□ -1.34
SNX6-201ENST00000362031 IGLV6-57P01721 117 aa6.67□□□□□ -1.34
SNX6-201ENST00000362031 C3orf22Q8N5N4 141 aa6.67□□□□□ -1.34
SNX6-201ENST00000362031 IMUPQ9GZP8 106 aa6.67□□□□□ -1.34
SNX6-201ENST00000362031 ABCA13Q86UQ4 5058 aa6.67□□□□□ -1.34
SNX6-201ENST00000362031 TRBV7-7A0A0K0K1E9 115 aa6.67□□□□□ -1.34
SNX6-201ENST00000362031 TRBV10-2A0A0K0K1G8 114 aa6.67□□□□□ -1.34
SNX6-201ENST00000362031 C9orf153Q5TBE3 101 aa6.67□□□□□ -1.34
SNX6-201ENST00000362031 CDK2AP2O75956 126 aa6.66□□□□□ -1.34
SNX6-201ENST00000362031 COPS9Q8WXC6 57 aa6.66□□□□□ -1.34
SNX6-201ENST00000362031 SCGB1C2P0DMR2 95 aa6.65□□□□□ -1.35
SNX6-201ENST00000362031 UBE2BP63146 152 aa6.65□□□□□ -1.35
SNX6-201ENST00000362031 PSORS1C2Q9UIG4 136 aa6.65□□□□□ -1.35
SNX6-201ENST00000362031 V9GYY9 64 aa6.65□□□□□ -1.35
SNX6-201ENST00000362031 S100A7L2Q5SY68 101 aa6.64□□□□□ -1.35
SNX6-201ENST00000362031 FAM240AA0A1B0GVK7 77 aa6.64□□□□□ -1.35
SNX6-201ENST00000362031 H7C2G1 150 aa6.63□□□□□ -1.35
SNX6-201ENST00000362031 CRYGAP11844 174 aa6.63□□□□□ -1.35
SNX6-201ENST00000362031 RPL13AP40429 203 aaKnown RBP6.63□□□□□ -1.35
SNX6-201ENST00000362031 KRTAP10-4P60372 401 aaPredicted RBP6.63□□□□□ -1.35
SNX6-201ENST00000362031 TMEM258P61165 79 aa6.63□□□□□ -1.35
SNX6-201ENST00000362031 LINC00528Q8N1L1 170 aa6.63□□□□□ -1.35
SNX6-201ENST00000362031 ANKRD29Q8N6D5 301 aa6.63□□□□□ -1.35
SNX6-201ENST00000362031 KCNQ1DNQ9H478 68 aa6.63□□□□□ -1.35
SNX6-201ENST00000362031 A0A0B4J2C4 111 aa6.62□□□□□ -1.35
SNX6-201ENST00000362031 PKHD1L1Q86WI1 4243 aa6.62□□□□□ -1.35
SNX6-201ENST00000362031 TRAV13-2A0A0B4J235 113 aa6.62□□□□□ -1.35
SNX6-201ENST00000362031 SMIM11BQ8TCY0 68 aa6.62□□□□□ -1.35
SNX6-201ENST00000362031 MYCBP2O75592 4640 aa6.61□□□□□ -1.35
SNX6-201ENST00000362031 TRAV23DV6A0A075B6W5 121 aa6.61□□□□□ -1.35
SNX6-201ENST00000362031 KRTAP4-16G5E9R7 235 aaPredicted RBP6.61□□□□□ -1.35
SNX6-201ENST00000362031 PRO1854Q9UHT4 67 aa6.61□□□□□ -1.35
SNX6-201ENST00000362031 LRP1Q07954 4544 aaKnown RBP6.61□□□□□ -1.35
SNX6-201ENST00000362031 SPRR1AP35321 89 aa6.6□□□□□ -1.35
SNX6-201ENST00000362031 Q5XG85 94 aa6.6□□□□□ -1.35
SNX6-201ENST00000362031 C1orf137Q5JT78 98 aa6.6□□□□□ -1.35
SNX6-201ENST00000362031 GAGE2AQ6NT46 116 aa6.6□□□□□ -1.35
SNX6-201ENST00000362031 REG3GQ6UW15 175 aa6.6□□□□□ -1.35
SNX6-201ENST00000362031 ZNF73O43830 326 aaPredicted RBP6.59□□□□□ -1.35
SNX6-201ENST00000362031 C6orf99Q4VX62 202 aa6.59□□□□□ -1.35
SNX6-201ENST00000362031 PSMB2P49721 201 aa6.59□□□□□ -1.36
SNX6-201ENST00000362031 PRLHP81277 87 aa6.59□□□□□ -1.36
SNX6-201ENST00000362031 KRTAP4-5Q9BYR2 181 aa6.59□□□□□ -1.36
SNX6-201ENST00000362031 PRYO14603 147 aa6.58□□□□□ -1.36
SNX6-201ENST00000362031 COX7CP15954 63 aa6.58□□□□□ -1.36
SNX6-201ENST00000362031 BCE1O60756 84 aa6.57□□□□□ -1.36
SNX6-201ENST00000362031 HRCT1Q6UXD1 115 aa6.57□□□□□ -1.36
SNX6-201ENST00000362031 KRTAP13-1Q8IUC0 172 aa6.57□□□□□ -1.36
SNX6-201ENST00000362031 PCLOQ9Y6V0 5065 aa6.57□□□□□ -1.36
SNX6-201ENST00000362031 SLC25A20O43772 301 aa6.57□□□□□ -1.36
SNX6-201ENST00000362031 RPL37AP61513 92 aaKnown RBP6.57□□□□□ -1.36
SNX6-201ENST00000362031 RPL28P46779 137 aaKnown RBP6.56□□□□□ -1.36
SNX6-201ENST00000362031 C4orf26Q17RF5 130 aa6.56□□□□□ -1.36
SNX6-201ENST00000362031 Q5VSD8 79 aa6.56□□□□□ -1.36
SNX6-201ENST00000362031 FAM19A1Q7Z5A9 133 aa6.56□□□□□ -1.36
SNX6-201ENST00000362031 Q9BRP9 147 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms