RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 M0R2N4 97 aa9.41□□□□□ -0.9
COL6A1-201ENST00000361866 IL17DQ8TAD2 202 aa9.4□□□□□ -0.9
COL6A1-201ENST00000361866 SMG1Q96Q15 3661 aaKnown RBP9.4□□□□□ -0.9
COL6A1-201ENST00000361866 C7orf33Q8WU49 177 aa9.4□□□□□ -0.91
COL6A1-201ENST00000361866 FBN2P35556 2912 aa9.39□□□□□ -0.91
COL6A1-201ENST00000361866 LINC00474Q9P2X8 69 aa9.39□□□□□ -0.91
COL6A1-201ENST00000361866 COL6A5A8TX70 2615 aa9.39□□□□□ -0.91
COL6A1-201ENST00000361866 C19orf73Q9NVV2 129 aa9.39□□□□□ -0.91
COL6A1-201ENST00000361866 CELSR2Q9HCU4 2923 aa9.39□□□□□ -0.91
COL6A1-201ENST00000361866 CRYBG3Q68DQ2 2970 aa9.39□□□□□ -0.91
COL6A1-201ENST00000361866 PRLHP81277 87 aa9.39□□□□□ -0.91
COL6A1-201ENST00000361866 C2orf48Q96LS8 159 aa9.39□□□□□ -0.91
COL6A1-201ENST00000361866 B9D2Q9BPU9 175 aa9.38□□□□□ -0.91
COL6A1-201ENST00000361866 HRNRQ86YZ3 2850 aaPredicted RBP9.38□□□□□ -0.91
COL6A1-201ENST00000361866 CR1P17927 2039 aa9.38□□□□□ -0.91
COL6A1-201ENST00000361866 ELOF1P60002 83 aaKnown RBP9.38□□□□□ -0.91
COL6A1-201ENST00000361866 LOC110117498A0A087WWA1 95 aa9.37□□□□□ -0.91
COL6A1-201ENST00000361866 LINC01600Q96MT4 127 aa9.37□□□□□ -0.91
COL6A1-201ENST00000361866 IGLV6-57P01721 117 aa9.36□□□□□ -0.91
COL6A1-201ENST00000361866 SPINK6Q6UWN8 80 aa9.36□□□□□ -0.91
COL6A1-201ENST00000361866 DCHS2Q6V1P9 2916 aa9.35□□□□□ -0.91
COL6A1-201ENST00000361866 CYSTM1Q9H1C7 97 aa9.35□□□□□ -0.91
COL6A1-201ENST00000361866 IGLV9-49A0A0B4J1Y8 123 aa9.35□□□□□ -0.91
COL6A1-201ENST00000361866 ST20-AS1Q8NBB2 130 aa9.34□□□□□ -0.91
COL6A1-201ENST00000361866 PRR15LQ9BU68 103 aa9.34□□□□□ -0.91
COL6A1-201ENST00000361866 C22orf24Q9Y442 160 aa9.34□□□□□ -0.91
COL6A1-201ENST00000361866 REG3GQ6UW15 175 aa9.33□□□□□ -0.92
COL6A1-201ENST00000361866 Q8NAQ8 132 aa9.33□□□□□ -0.92
COL6A1-201ENST00000361866 CUBNO60494 3623 aa9.33□□□□□ -0.92
COL6A1-201ENST00000361866 Q6ZRP5 223 aa9.32□□□□□ -0.92
COL6A1-201ENST00000361866 LINC00167Q96N53 147 aa9.32□□□□□ -0.92
COL6A1-201ENST00000361866 VPREB1P12018 145 aa9.32□□□□□ -0.92
COL6A1-201ENST00000361866 STAB1Q9NY15 2570 aa9.31□□□□□ -0.92
COL6A1-201ENST00000361866 H7BZZ5 65 aa9.3□□□□□ -0.92
COL6A1-201ENST00000361866 PCOTHQ58A44 107 aa9.3□□□□□ -0.92
COL6A1-201ENST00000361866 Q9BRP9 147 aa9.29□□□□□ -0.92
COL6A1-201ENST00000361866 HCG22E2RYF7 251 aa9.29□□□□□ -0.92
COL6A1-201ENST00000361866 CASC2Q6XLA1 102 aa9.28□□□□□ -0.92
COL6A1-201ENST00000361866 BCE1O60756 84 aa9.28□□□□□ -0.92
COL6A1-201ENST00000361866 BAHCC1Q9P281 2608 aa9.28□□□□□ -0.92
COL6A1-201ENST00000361866 FAM168BA1KXE4 195 aa9.27□□□□□ -0.93
COL6A1-201ENST00000361866 SVEP1Q4LDE5 3571 aa9.27□□□□□ -0.93
COL6A1-201ENST00000361866 A0A0G2JQZ4 141 aa9.26□□□□□ -0.93
COL6A1-201ENST00000361866 A0A1W2PNN7 141 aa9.26□□□□□ -0.93
COL6A1-201ENST00000361866 C14orf177Q52M58 125 aa9.26□□□□□ -0.93
COL6A1-201ENST00000361866 OBSCN-AS1Q96MR7 158 aa9.26□□□□□ -0.93
COL6A1-201ENST00000361866 ITPR2Q14571 2701 aa9.25□□□□□ -0.93
COL6A1-201ENST00000361866 SERTAD4-AS1Q5TG53 156 aa9.25□□□□□ -0.93
COL6A1-201ENST00000361866 WIPF1O43516 503 aa9.25□□□□□ -0.93
COL6A1-201ENST00000361866 H0Y9P7 68 aa9.24□□□□□ -0.93
COL6A1-201ENST00000361866 KLKP1Q107X0 134 aa9.24□□□□□ -0.93
COL6A1-201ENST00000361866 LINC01556Q5JQF7 62 aa9.24□□□□□ -0.93
COL6A1-201ENST00000361866 LINC00528Q8N1L1 170 aa9.24□□□□□ -0.93
COL6A1-201ENST00000361866 Q8NBF4 154 aa9.24□□□□□ -0.93
COL6A1-201ENST00000361866 Q6ZRX8 168 aa9.24□□□□□ -0.93
COL6A1-201ENST00000361866 GVQW2A0A096LPI5 108 aaPredicted RBP9.23□□□□□ -0.93
COL6A1-201ENST00000361866 Q8NDZ9 215 aa9.23□□□□□ -0.93
COL6A1-201ENST00000361866 TRBV7-4A0A0J9YYF1 115 aa9.22□□□□□ -0.93
COL6A1-201ENST00000361866 RPL37AP61513 92 aaKnown RBP9.22□□□□□ -0.93
COL6A1-201ENST00000361866 KRTAP24-1Q3LI83 254 aa9.22□□□□□ -0.93
COL6A1-201ENST00000361866 PRR34Q9NV39 138 aa9.22□□□□□ -0.93
COL6A1-201ENST00000361866 KRTAP10-3P60369 221 aa9.22□□□□□ -0.93
COL6A1-201ENST00000361866 CELSR1Q9NYQ6 3014 aa9.22□□□□□ -0.93
COL6A1-201ENST00000361866 LINC00476Q8WZB0 136 aa9.21□□□□□ -0.93
COL6A1-201ENST00000361866 HIVEP1P15822 2718 aa9.21□□□□□ -0.94
COL6A1-201ENST00000361866 K7EQZ3 153 aa9.2□□□□□ -0.94
COL6A1-201ENST00000361866 NSD1Q96L73 2696 aaPredicted RBP9.2□□□□□ -0.94
COL6A1-201ENST00000361866 LINC00612Q8N6U2 182 aa9.2□□□□□ -0.94
COL6A1-201ENST00000361866 IGHV6-1A0A0B4J1U7 121 aa9.2□□□□□ -0.94
COL6A1-201ENST00000361866 F8WDY8 70 aa9.19□□□□□ -0.94
COL6A1-201ENST00000361866 Q8N377 158 aa9.19□□□□□ -0.94
COL6A1-201ENST00000361866 C15orf56Q8N910 161 aa9.17□□□□□ -0.94
COL6A1-201ENST00000361866 C1orf64Q8NEQ6 169 aa9.17□□□□□ -0.94
COL6A1-201ENST00000361866 APCP25054 2843 aa9.17□□□□□ -0.94
COL6A1-201ENST00000361866 KRTAP1-3Q8IUG1 177 aa9.16□□□□□ -0.94
COL6A1-201ENST00000361866 MXRA5Q9NR99 2828 aa9.16□□□□□ -0.94
COL6A1-201ENST00000361866 A8MUN3 132 aa9.14□□□□□ -0.95
COL6A1-201ENST00000361866 CHTF8P0CG12 524 aa9.14□□□□□ -0.95
COL6A1-201ENST00000361866 Q5XG85 94 aa9.14□□□□□ -0.95
COL6A1-201ENST00000361866 KCNQ1DNQ9H478 68 aa9.13□□□□□ -0.95
COL6A1-201ENST00000361866 LINC00588Q9Y4M8 146 aa9.13□□□□□ -0.95
COL6A1-201ENST00000361866 PHF5AQ7RTV0 110 aaKnown RBP9.12□□□□□ -0.95
COL6A1-201ENST00000361866 hDV103S1A0JD37 113 aa9.1□□□□□ -0.95
COL6A1-201ENST00000361866 RETNLBQ9BQ08 111 aa9.1□□□□□ -0.95
COL6A1-201ENST00000361866 SPENQ96T58 3664 aaKnown RBP9.1□□□□□ -0.95
COL6A1-201ENST00000361866 H3BNG1 76 aa9.1□□□□□ -0.95
COL6A1-201ENST00000361866 ERC2-IT1O76042 136 aa9.1□□□□□ -0.95
COL6A1-201ENST00000361866 A0A1W2PNM2 257 aa9.1□□□□□ -0.95
COL6A1-201ENST00000361866 OXTP01178 125 aa9.09□□□□□ -0.95
COL6A1-201ENST00000361866 LIMD2Q9BT23 127 aa9.09□□□□□ -0.95
COL6A1-201ENST00000361866 IGLV1-50A0A075B6I6 118 aa9.08□□□□□ -0.96
COL6A1-201ENST00000361866 CASC10Q5T4H9 136 aa9.08□□□□□ -0.96
COL6A1-201ENST00000361866 CIRBP-AS1Q8TBR5 109 aa9.08□□□□□ -0.96
COL6A1-201ENST00000361866 LY6G6CO95867 125 aa9.07□□□□□ -0.96
COL6A1-201ENST00000361866 KRTAP1-1Q07627 177 aa9.07□□□□□ -0.96
COL6A1-201ENST00000361866 C4orf48Q5BLP8 95 aa9.07□□□□□ -0.96
COL6A1-201ENST00000361866 EPM2AB3EWF7 344 aa9.06□□□□□ -0.96
COL6A1-201ENST00000361866 SPAG11AQ6PDA7 123 aa9.05□□□□□ -0.96
COL6A1-201ENST00000361866 IGFL1Q6UW32 110 aa9.04□□□□□ -0.96
COL6A1-201ENST00000361866 A0A1B0GW54 56 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms