RNA–Protein interactions for RNA: ENST00000361796.9

CTNND1-204, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-204ENST00000361796 ABCA12Q86UK0 2595 aa5.28□□□□□ -1.56
CTNND1-204ENST00000361796 CD164Q04900 197 aa5.28□□□□□ -1.56
CTNND1-204ENST00000361796 ZNF575Q86XF7 245 aa5.28□□□□□ -1.56
CTNND1-204ENST00000361796 PRR15Q8IV56 129 aa5.27□□□□□ -1.57
CTNND1-204ENST00000361796 TLN1Q9Y490 2541 aaKnown RBP5.27□□□□□ -1.57
CTNND1-204ENST00000361796 Q6ZSA8 131 aa5.27□□□□□ -1.57
CTNND1-204ENST00000361796 A0A0D9SG42 100 aa5.26□□□□□ -1.57
CTNND1-204ENST00000361796 GIG44P09565 113 aaPredicted RBP5.26□□□□□ -1.57
CTNND1-204ENST00000361796 MIR22HGQ0VDD5 57 aa5.26□□□□□ -1.57
CTNND1-204ENST00000361796 A0A1B0GVX0 72 aa5.26□□□□□ -1.57
CTNND1-204ENST00000361796 ERC2-IT1O76042 136 aa5.25□□□□□ -1.57
CTNND1-204ENST00000361796 UQCR11O14957 56 aa5.25□□□□□ -1.57
CTNND1-204ENST00000361796 Q8N1X5 172 aa5.24□□□□□ -1.57
CTNND1-204ENST00000361796 LUZP6Q538Z0 58 aa5.24□□□□□ -1.57
CTNND1-204ENST00000361796 DNAH12Q6ZR08 3092 aa5.24□□□□□ -1.57
CTNND1-204ENST00000361796 TLN2Q9Y4G6 2542 aa5.24□□□□□ -1.57
CTNND1-204ENST00000361796 ZNF861PO60384 105 aa5.24□□□□□ -1.57
CTNND1-204ENST00000361796 A0A087WTM6 91 aa5.23□□□□□ -1.57
CTNND1-204ENST00000361796 PRR34Q9NV39 138 aa5.23□□□□□ -1.57
CTNND1-204ENST00000361796 KLK9Q2XQG4 91 aa5.22□□□□□ -1.57
CTNND1-204ENST00000361796 C19orf73Q9NVV2 129 aa5.21□□□□□ -1.57
CTNND1-204ENST00000361796 PSORS1C2Q9UIG4 136 aa5.21□□□□□ -1.58
CTNND1-204ENST00000361796 H7BZZ5 65 aa5.21□□□□□ -1.58
CTNND1-204ENST00000361796 LCA10Q71F78 164 aa5.21□□□□□ -1.58
CTNND1-204ENST00000361796 SETD2Q9BYW2 2564 aaPredicted RBP5.2□□□□□ -1.58
CTNND1-204ENST00000361796 ZFYVE26Q68DK2 2539 aa5.2□□□□□ -1.58
CTNND1-204ENST00000361796 CYP4F30PQ9H0H9 118 aa5.2□□□□□ -1.58
CTNND1-204ENST00000361796 IGLV5-48A0A075B6I7 105 aa5.2□□□□□ -1.58
CTNND1-204ENST00000361796 CAMK2N1Q7Z7J9 78 aa5.2□□□□□ -1.58
CTNND1-204ENST00000361796 KTN1-AS1Q86SY8 53 aa5.19□□□□□ -1.58
CTNND1-204ENST00000361796 IGLV7-43P04211 117 aa5.19□□□□□ -1.58
CTNND1-204ENST00000361796 KLKP1Q107X0 134 aa5.19□□□□□ -1.58
CTNND1-204ENST00000361796 USP9XQ93008 2570 aaPredicted RBP5.19□□□□□ -1.58
CTNND1-204ENST00000361796 A0A096LNT2 108 aa5.18□□□□□ -1.58
CTNND1-204ENST00000361796 A0A1W2PNM2 257 aa5.18□□□□□ -1.58
CTNND1-204ENST00000361796 IGLV7-46A0A075B6I9 117 aa5.17□□□□□ -1.58
CTNND1-204ENST00000361796 ANKRD11Q6UB99 2663 aaPredicted RBP5.17□□□□□ -1.58
CTNND1-204ENST00000361796 SPRR4Q96PI1 79 aa5.16□□□□□ -1.58
CTNND1-204ENST00000361796 ANKRD17O75179 2603 aaKnown RBP5.16□□□□□ -1.58
CTNND1-204ENST00000361796 C9orf163Q8N9P6 203 aa5.16□□□□□ -1.58
CTNND1-204ENST00000361796 PIEZO1Q92508 2521 aa5.16□□□□□ -1.58
CTNND1-204ENST00000361796 ZNF462Q96JM2 2506 aa5.16□□□□□ -1.58
CTNND1-204ENST00000361796 TLX1NBP0CAT3 122 aa5.15□□□□□ -1.58
CTNND1-204ENST00000361796 PLA2G2DQ9UNK4 145 aa5.15□□□□□ -1.59
CTNND1-204ENST00000361796 LINC00612Q8N6U2 182 aa5.14□□□□□ -1.59
CTNND1-204ENST00000361796 FAM104AQ969W3 186 aa5.14□□□□□ -1.59
CTNND1-204ENST00000361796 POLQO75417 2590 aa5.14□□□□□ -1.59
CTNND1-204ENST00000361796 CEP295Q9C0D2 2601 aa5.14□□□□□ -1.59
CTNND1-204ENST00000361796 A0A0A0MQY5 61 aa5.13□□□□□ -1.59
CTNND1-204ENST00000361796 H3BS24 57 aa5.13□□□□□ -1.59
CTNND1-204ENST00000361796 PKD1L2Q7Z442 2459 aa5.12□□□□□ -1.59
CTNND1-204ENST00000361796 C5orf42Q9H799 3197 aa5.11□□□□□ -1.59
CTNND1-204ENST00000361796 CDC42SE1Q9NRR8 79 aa5.11□□□□□ -1.59
CTNND1-204ENST00000361796 KRTAP1-3Q8IUG1 177 aa5.11□□□□□ -1.59
CTNND1-204ENST00000361796 PRR26Q8N8Z3 221 aa5.11□□□□□ -1.59
CTNND1-204ENST00000361796 CHD8Q9HCK8 2581 aa5.09□□□□□ -1.59
CTNND1-204ENST00000361796 USP9YO00507 2555 aaPredicted RBP5.09□□□□□ -1.59
CTNND1-204ENST00000361796 TNP2Q05952 138 aa5.09□□□□□ -1.59
CTNND1-204ENST00000361796 CNBPP62633 177 aaKnown RBP5.09□□□□□ -1.59
CTNND1-204ENST00000361796 SPTBN4Q9H254 2564 aa5.09□□□□□ -1.59
CTNND1-204ENST00000361796 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.08□□□□□ -1.6
CTNND1-204ENST00000361796 MTORP42345 2549 aa5.08□□□□□ -1.6
CTNND1-204ENST00000361796 BRCA2P51587 3418 aa5.08□□□□□ -1.6
CTNND1-204ENST00000361796 ACANP16112 2415 aa5.07□□□□□ -1.6
CTNND1-204ENST00000361796 LINC00483Q53H64 154 aa5.07□□□□□ -1.6
CTNND1-204ENST00000361796 KRTAP1-1Q07627 177 aa5.07□□□□□ -1.6
CTNND1-204ENST00000361796 FAM229BQ4G0N7 80 aa5.06□□□□□ -1.6
CTNND1-204ENST00000361796 SPANXA2-OT1Q8N9U9 137 aa5.05□□□□□ -1.6
CTNND1-204ENST00000361796 F8P00451 2351 aa5.05□□□□□ -1.6
CTNND1-204ENST00000361796 OCR1Q9BZK8 76 aa5.05□□□□□ -1.6
CTNND1-204ENST00000361796 BPTFQ12830 3046 aa5.05□□□□□ -1.6
CTNND1-204ENST00000361796 CEP350Q5VT06 3117 aa5.03□□□□□ -1.6
CTNND1-204ENST00000361796 WIPF1O43516 503 aa5.03□□□□□ -1.6
CTNND1-204ENST00000361796 HRES1P13985 223 aa5.03□□□□□ -1.6
CTNND1-204ENST00000361796 PLAC4Q8WY50 150 aa5.03□□□□□ -1.6
CTNND1-204ENST00000361796 Q8NDZ9 215 aa5.02□□□□□ -1.61
CTNND1-204ENST00000361796 CR1P17927 2039 aa5.02□□□□□ -1.61
CTNND1-204ENST00000361796 CYSTM1Q9H1C7 97 aa5□□□□□ -1.61
CTNND1-204ENST00000361796 Q8N9P0 234 aaPredicted RBP5□□□□□ -1.61
CTNND1-204ENST00000361796 Q1T7F1 81 aa5□□□□□ -1.61
CTNND1-204ENST00000361796 PRAC1Q96KF2 57 aa4.99□□□□□ -1.61
CTNND1-204ENST00000361796 A0A1B0GU33 70 aa4.99□□□□□ -1.61
CTNND1-204ENST00000361796 SEC61BP60468 96 aaKnown RBP4.99□□□□□ -1.61
CTNND1-204ENST00000361796 FASNP49327 2511 aaKnown RBP4.99□□□□□ -1.61
CTNND1-204ENST00000361796 MMP24-AS1A0A0U1RRL7 71 aa4.96□□□□□ -1.62
CTNND1-204ENST00000361796 LAMA3Q16787 3333 aa4.95□□□□□ -1.62
CTNND1-204ENST00000361796 PRRC2CQ9Y520 2896 aaKnown RBP4.95□□□□□ -1.62
CTNND1-204ENST00000361796 S4R3F8 94 aa4.95□□□□□ -1.62
CTNND1-204ENST00000361796 Q75L30 129 aa4.94□□□□□ -1.62
CTNND1-204ENST00000361796 MKI67P46013 3256 aaKnown RBP4.94□□□□□ -1.62
CTNND1-204ENST00000361796 Q5XG85 94 aa4.94□□□□□ -1.62
CTNND1-204ENST00000361796 USP34Q70CQ2 3546 aa4.93□□□□□ -1.62
CTNND1-204ENST00000361796 ZCCHC13Q8WW36 166 aaKnown RBP4.93□□□□□ -1.62
CTNND1-204ENST00000361796 SZT2Q5T011 3432 aa4.93□□□□□ -1.62
CTNND1-204ENST00000361796 Q5W150 140 aa4.92□□□□□ -1.62
CTNND1-204ENST00000361796 SPINK7P58062 85 aa4.91□□□□□ -1.62
CTNND1-204ENST00000361796 FP248Q71RG6 208 aaPredicted RBP4.91□□□□□ -1.62
CTNND1-204ENST00000361796 CSAG1Q6PB30 78 aa4.9□□□□□ -1.62
CTNND1-204ENST00000361796 XIRP2A4UGR9 3374 aa4.9□□□□□ -1.63
CTNND1-204ENST00000361796 PLAC8Q9NZF1 115 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms