RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 DNAH10OSP0CZ25 163 aa8.82□□□□□ -1
CCDC144A-203ENST00000360495 NBDYA0A0U1RRE5 68 aa8.82□□□□□ -1
CCDC144A-203ENST00000360495 USP9YO00507 2555 aaPredicted RBP8.81□□□□□ -1
CCDC144A-203ENST00000360495 A0A1W2PNM2 257 aa8.8□□□□□ -1
CCDC144A-203ENST00000360495 COL27A1Q8IZC6 1860 aaPredicted RBP8.79□□□□□ -1
CCDC144A-203ENST00000360495 Q5XG85 94 aa8.79□□□□□ -1
CCDC144A-203ENST00000360495 OCR1Q9BZK8 76 aa8.79□□□□□ -1
CCDC144A-203ENST00000360495 FAM104AQ969W3 186 aa8.79□□□□□ -1
CCDC144A-203ENST00000360495 C15orf56Q8N910 161 aa8.78□□□□□ -1
CCDC144A-203ENST00000360495 PRR34Q9NV39 138 aa8.78□□□□□ -1
CCDC144A-203ENST00000360495 H3BS24 57 aa8.77□□□□□ -1.01
CCDC144A-203ENST00000360495 CSNK1G2-AS1Q8NCQ2 148 aa8.75□□□□□ -1.01
CCDC144A-203ENST00000360495 PRR26Q8N8Z3 221 aa8.74□□□□□ -1.01
CCDC144A-203ENST00000360495 A0A0D9SG42 100 aa8.73□□□□□ -1.01
CCDC144A-203ENST00000360495 LINC01554Q52M75 96 aa8.73□□□□□ -1.01
CCDC144A-203ENST00000360495 C9orf163Q8N9P6 203 aa8.72□□□□□ -1.01
CCDC144A-203ENST00000360495 Q75L30 129 aa8.72□□□□□ -1.01
CCDC144A-203ENST00000360495 PLA2G2DQ9UNK4 145 aa8.72□□□□□ -1.01
CCDC144A-203ENST00000360495 LUZP6Q538Z0 58 aa8.7□□□□□ -1.02
CCDC144A-203ENST00000360495 FAM229BQ4G0N7 80 aa8.7□□□□□ -1.02
CCDC144A-203ENST00000360495 IGLV5-48A0A075B6I7 105 aa8.69□□□□□ -1.02
CCDC144A-203ENST00000360495 TLX1NBP0CAT3 122 aa8.69□□□□□ -1.02
CCDC144A-203ENST00000360495 FP248Q71RG6 208 aaPredicted RBP8.69□□□□□ -1.02
CCDC144A-203ENST00000360495 ZNF861PO60384 105 aa8.68□□□□□ -1.02
CCDC144A-203ENST00000360495 Q8N1X5 172 aa8.68□□□□□ -1.02
CCDC144A-203ENST00000360495 CYSTM1Q9H1C7 97 aa8.67□□□□□ -1.02
CCDC144A-203ENST00000360495 C9orf92A6NGG3 77 aa8.66□□□□□ -1.02
CCDC144A-203ENST00000360495 PRAC1Q96KF2 57 aa8.66□□□□□ -1.02
CCDC144A-203ENST00000360495 ANAPC11Q9NYG5 84 aa8.65□□□□□ -1.02
CCDC144A-203ENST00000360495 MTORP42345 2549 aa8.65□□□□□ -1.02
CCDC144A-203ENST00000360495 IGLV7-46A0A075B6I9 117 aa8.65□□□□□ -1.02
CCDC144A-203ENST00000360495 GIG44P09565 113 aaPredicted RBP8.63□□□□□ -1.03
CCDC144A-203ENST00000360495 LINC00304Q8N9R0 145 aa8.63□□□□□ -1.03
CCDC144A-203ENST00000360495 Q8N9P0 234 aaPredicted RBP8.62□□□□□ -1.03
CCDC144A-203ENST00000360495 ACANP16112 2415 aa8.62□□□□□ -1.03
CCDC144A-203ENST00000360495 CEP295Q9C0D2 2601 aa8.62□□□□□ -1.03
CCDC144A-203ENST00000360495 LINC00612Q8N6U2 182 aa8.61□□□□□ -1.03
CCDC144A-203ENST00000360495 SPRR4Q96PI1 79 aa8.6□□□□□ -1.03
CCDC144A-203ENST00000360495 LINC01558Q9Y6Z2 57 aa8.6□□□□□ -1.03
CCDC144A-203ENST00000360495 ANKRD11Q6UB99 2663 aaPredicted RBP8.59□□□□□ -1.03
CCDC144A-203ENST00000360495 COL4A2P08572 1712 aa8.58□□□□□ -1.04
CCDC144A-203ENST00000360495 IGLV5-37A0A075B6J1 123 aa8.57□□□□□ -1.04
CCDC144A-203ENST00000360495 Q5VV11 94 aa8.57□□□□□ -1.04
CCDC144A-203ENST00000360495 A0A096LNT2 108 aa8.56□□□□□ -1.04
CCDC144A-203ENST00000360495 KRTAP24-1Q3LI83 254 aa8.56□□□□□ -1.04
CCDC144A-203ENST00000360495 A0A1B0GU33 70 aa8.56□□□□□ -1.04
CCDC144A-203ENST00000360495 C19orf73Q9NVV2 129 aa8.56□□□□□ -1.04
CCDC144A-203ENST00000360495 CHD8Q9HCK8 2581 aa8.54□□□□□ -1.04
CCDC144A-203ENST00000360495 COX6B2Q6YFQ2 88 aa8.54□□□□□ -1.04
CCDC144A-203ENST00000360495 HRES1P13985 223 aa8.53□□□□□ -1.04
CCDC144A-203ENST00000360495 IGLV7-43P04211 117 aa8.53□□□□□ -1.04
CCDC144A-203ENST00000360495 PSORS1C2Q9UIG4 136 aa8.53□□□□□ -1.04
CCDC144A-203ENST00000360495 CASC10Q5T4H9 136 aa8.53□□□□□ -1.04
CCDC144A-203ENST00000360495 CSAG1Q6PB30 78 aa8.53□□□□□ -1.04
CCDC144A-203ENST00000360495 ZNF575Q86XF7 245 aa8.52□□□□□ -1.05
CCDC144A-203ENST00000360495 CNBPP62633 177 aaKnown RBP8.51□□□□□ -1.05
CCDC144A-203ENST00000360495 OXTP01178 125 aa8.51□□□□□ -1.05
CCDC144A-203ENST00000360495 SPTBN4Q9H254 2564 aa8.5□□□□□ -1.05
CCDC144A-203ENST00000360495 CENPFP49454 3210 aa8.5□□□□□ -1.05
CCDC144A-203ENST00000360495 POLQO75417 2590 aa8.5□□□□□ -1.05
CCDC144A-203ENST00000360495 A0A087WTM6 91 aa8.49□□□□□ -1.05
CCDC144A-203ENST00000360495 SPINK7P58062 85 aa8.48□□□□□ -1.05
CCDC144A-203ENST00000360495 CR1P17927 2039 aa8.48□□□□□ -1.05
CCDC144A-203ENST00000360495 KRTAP10-11P60412 298 aa8.46□□□□□ -1.06
CCDC144A-203ENST00000360495 ANKRD17O75179 2603 aaKnown RBP8.45□□□□□ -1.06
CCDC144A-203ENST00000360495 PCSK5Q92824 1860 aa8.45□□□□□ -1.06
CCDC144A-203ENST00000360495 MMP24-AS1A0A0U1RRL7 71 aa8.44□□□□□ -1.06
CCDC144A-203ENST00000360495 A0A0A0MQY5 61 aa8.44□□□□□ -1.06
CCDC144A-203ENST00000360495 DMAC1Q96GE9 116 aa8.43□□□□□ -1.06
CCDC144A-203ENST00000360495 K7EIL1 84 aa8.4□□□□□ -1.07
CCDC144A-203ENST00000360495 LINC00483Q53H64 154 aa8.39□□□□□ -1.07
CCDC144A-203ENST00000360495 WWC2-AS2Q96NR7 200 aa8.37□□□□□ -1.07
CCDC144A-203ENST00000360495 FASNP49327 2511 aaKnown RBP8.37□□□□□ -1.07
CCDC144A-203ENST00000360495 SMR3BP02814 79 aaPredicted RBP8.37□□□□□ -1.07
CCDC144A-203ENST00000360495 KRTAP10-3P60369 221 aa8.36□□□□□ -1.07
CCDC144A-203ENST00000360495 CAMK2N1Q7Z7J9 78 aa8.35□□□□□ -1.07
CCDC144A-203ENST00000360495 J3QL48 77 aa8.35□□□□□ -1.07
CCDC144A-203ENST00000360495 Q8NDZ9 215 aa8.35□□□□□ -1.07
CCDC144A-203ENST00000360495 Q5W150 140 aa8.29□□□□□ -1.08
CCDC144A-203ENST00000360495 LINC00472Q9H8W2 130 aa8.28□□□□□ -1.08
CCDC144A-203ENST00000360495 EPG5Q9HCE0 2579 aa8.27□□□□□ -1.09
CCDC144A-203ENST00000360495 ZCCHC13Q8WW36 166 aaKnown RBP8.27□□□□□ -1.09
CCDC144A-203ENST00000360495 SPRR1AP35321 89 aa8.27□□□□□ -1.09
CCDC144A-203ENST00000360495 USP24Q9UPU5 2620 aa8.26□□□□□ -1.09
CCDC144A-203ENST00000360495 ROMO1P60602 79 aa8.23□□□□□ -1.09
CCDC144A-203ENST00000360495 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.23□□□□□ -1.09
CCDC144A-203ENST00000360495 ASB16-AS1Q495Z4 193 aa8.21□□□□□ -1.1
CCDC144A-203ENST00000360495 Q6ZSA8 131 aa8.21□□□□□ -1.1
CCDC144A-203ENST00000360495 RPL37P61927 97 aaKnown RBP8.19□□□□□ -1.1
CCDC144A-203ENST00000360495 S4R3F8 94 aa8.19□□□□□ -1.1
CCDC144A-203ENST00000360495 SPRR1BP22528 89 aa8.18□□□□□ -1.1
CCDC144A-203ENST00000360495 BPTFQ12830 3046 aa8.15□□□□□ -1.11
CCDC144A-203ENST00000360495 MGAM2Q2M2H8 2515 aa8.13□□□□□ -1.11
CCDC144A-203ENST00000360495 KRTAP26-1Q6PEX3 210 aa8.13□□□□□ -1.11
CCDC144A-203ENST00000360495 H1FX-AS1Q4G0G2 97 aa8.13□□□□□ -1.11
CCDC144A-203ENST00000360495 KRTAP16-1A8MUX0 517 aa8.12□□□□□ -1.11
CCDC144A-203ENST00000360495 PRRC2CQ9Y520 2896 aaKnown RBP8.12□□□□□ -1.11
CCDC144A-203ENST00000360495 TNP2Q05952 138 aa8.11□□□□□ -1.11
CCDC144A-203ENST00000360495 A6NN06 94 aa8.1□□□□□ -1.11
CCDC144A-203ENST00000360495 GOLGB1Q14789 3259 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms