RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 CHTF8P0CG12 524 aa3.22□□□□□ -1.89
SCN3A-202ENST00000360093 IGKV2D-30A0A075B6S6 120 aa3.21□□□□□ -1.9
SCN3A-202ENST00000360093 IGKV2-30P06310 120 aa3.21□□□□□ -1.9
SCN3A-202ENST00000360093 SERTAD4-AS1Q5TG53 156 aa3.21□□□□□ -1.9
SCN3A-202ENST00000360093 C7orf65Q6ZTY9 151 aa3.21□□□□□ -1.9
SCN3A-202ENST00000360093 ST20-AS1Q8NBB2 130 aa3.21□□□□□ -1.9
SCN3A-202ENST00000360093 RETNLBQ9BQ08 111 aa3.21□□□□□ -1.9
SCN3A-202ENST00000360093 HECTD1Q9ULT8 2610 aa3.2□□□□□ -1.9
SCN3A-202ENST00000360093 CFAP46Q8IYW2 2715 aa3.2□□□□□ -1.9
SCN3A-202ENST00000360093 APLNQ9ULZ1 77 aa3.2□□□□□ -1.9
SCN3A-202ENST00000360093 LOC101927531A0A1B0GV80 90 aa3.2□□□□□ -1.9
SCN3A-202ENST00000360093 FAM168BA1KXE4 195 aa3.2□□□□□ -1.9
SCN3A-202ENST00000360093 ERC2-IT1O76042 136 aa3.2□□□□□ -1.9
SCN3A-202ENST00000360093 USP24Q9UPU5 2620 aa3.2□□□□□ -1.9
SCN3A-202ENST00000360093 ZNF575Q86XF7 245 aa3.19□□□□□ -1.9
SCN3A-202ENST00000360093 RPS28P62857 69 aaKnown RBP3.19□□□□□ -1.9
SCN3A-202ENST00000360093 C9orf129Q5T035 196 aaKnown RBP3.19□□□□□ -1.9
SCN3A-202ENST00000360093 ATP11AUNQ6ZP68 121 aa3.19□□□□□ -1.9
SCN3A-202ENST00000360093 MRPL34Q9BQ48 92 aaKnown RBP3.18□□□□□ -1.9
SCN3A-202ENST00000360093 IGLV5-37A0A075B6J1 123 aa3.18□□□□□ -1.9
SCN3A-202ENST00000360093 RANBP2P49792 3224 aaKnown RBP3.18□□□□□ -1.9
SCN3A-202ENST00000360093 ZNF292O60281 2723 aa3.18□□□□□ -1.9
SCN3A-202ENST00000360093 A0A0U1RQV1 116 aa3.18□□□□□ -1.9
SCN3A-202ENST00000360093 SPINK1P00995 79 aa3.17□□□□□ -1.9
SCN3A-202ENST00000360093 A0A1B0GU69 56 aa3.17□□□□□ -1.9
SCN3A-202ENST00000360093 Q96NJ1 140 aa3.17□□□□□ -1.9
SCN3A-202ENST00000360093 LINC00304Q8N9R0 145 aa3.17□□□□□ -1.9
SCN3A-202ENST00000360093 IGFL1Q6UW32 110 aa3.17□□□□□ -1.9
SCN3A-202ENST00000360093 Q8N377 158 aa3.17□□□□□ -1.9
SCN3A-202ENST00000360093 MKI67P46013 3256 aaKnown RBP3.17□□□□□ -1.9
SCN3A-202ENST00000360093 IGLV7-43P04211 117 aa3.16□□□□□ -1.9
SCN3A-202ENST00000360093 PMAIP1Q13794 54 aa3.16□□□□□ -1.9
SCN3A-202ENST00000360093 J3QL48 77 aa3.16□□□□□ -1.9
SCN3A-202ENST00000360093 C1orf195Q5TG92 126 aa3.16□□□□□ -1.9
SCN3A-202ENST00000360093 PRR15Q8IV56 129 aa3.16□□□□□ -1.9
SCN3A-202ENST00000360093 LAMA3Q16787 3333 aa3.16□□□□□ -1.9
SCN3A-202ENST00000360093 K7EQZ3 153 aa3.15□□□□□ -1.9
SCN3A-202ENST00000360093 ATRQ13535 2644 aa3.15□□□□□ -1.9
SCN3A-202ENST00000360093 MGAM2Q2M2H8 2515 aa3.15□□□□□ -1.9
SCN3A-202ENST00000360093 PSPHP1O15172 72 aa3.15□□□□□ -1.9
SCN3A-202ENST00000360093 A0A1B0GVX0 72 aa3.15□□□□□ -1.91
SCN3A-202ENST00000360093 PSORS1C2Q9UIG4 136 aa3.14□□□□□ -1.91
SCN3A-202ENST00000360093 SPRR4Q96PI1 79 aa3.14□□□□□ -1.91
SCN3A-202ENST00000360093 C8orf17Q9NRJ1 99 aa3.14□□□□□ -1.91
SCN3A-202ENST00000360093 EIF4EBP3O60516 100 aaPredicted RBP3.14□□□□□ -1.91
SCN3A-202ENST00000360093 CD164Q04900 197 aa3.13□□□□□ -1.91
SCN3A-202ENST00000360093 A0A1W2PNN7 141 aa3.13□□□□□ -1.91
SCN3A-202ENST00000360093 MAST4O15021 2626 aa3.13□□□□□ -1.91
SCN3A-202ENST00000360093 IGLV5-48A0A075B6I7 105 aa3.13□□□□□ -1.91
SCN3A-202ENST00000360093 CENPEQ02224 2701 aa3.12□□□□□ -1.91
SCN3A-202ENST00000360093 BRCA2P51587 3418 aa3.12□□□□□ -1.91
SCN3A-202ENST00000360093 KLKP1Q107X0 134 aa3.12□□□□□ -1.91
SCN3A-202ENST00000360093 LINC01600Q96MT4 127 aa3.12□□□□□ -1.91
SCN3A-202ENST00000360093 MGAQ8IWI9 3026 aa3.12□□□□□ -1.91
SCN3A-202ENST00000360093 LAMA2P24043 3122 aaKnown RBP3.12□□□□□ -1.91
SCN3A-202ENST00000360093 CASC10Q5T4H9 136 aa3.1□□□□□ -1.91
SCN3A-202ENST00000360093 CYP4F30PQ9H0H9 118 aa3.1□□□□□ -1.91
SCN3A-202ENST00000360093 PRO0628Q9UI54 55 aa3.1□□□□□ -1.91
SCN3A-202ENST00000360093 OBSCN-AS1Q96MR7 158 aa3.1□□□□□ -1.91
SCN3A-202ENST00000360093 FAM229BQ4G0N7 80 aa3.1□□□□□ -1.91
SCN3A-202ENST00000360093 DSCR10P59022 87 aa3.1□□□□□ -1.91
SCN3A-202ENST00000360093 KMT2BQ9UMN6 2715 aaPredicted RBP3.09□□□□□ -1.91
SCN3A-202ENST00000360093 CFAP54Q96N23 3096 aa3.09□□□□□ -1.91
SCN3A-202ENST00000360093 RBM12B-AS1Q9P1G2 102 aa3.09□□□□□ -1.92
SCN3A-202ENST00000360093 SPANXA2-OT1Q8N9U9 137 aa3.08□□□□□ -1.92
SCN3A-202ENST00000360093 PRUNE2Q8WUY3 3088 aa3.08□□□□□ -1.92
SCN3A-202ENST00000360093 COA5Q86WW8 74 aa3.08□□□□□ -1.92
SCN3A-202ENST00000360093 PLAC8Q9NZF1 115 aa3.08□□□□□ -1.92
SCN3A-202ENST00000360093 A0A1W2PNM2 257 aa3.07□□□□□ -1.92
SCN3A-202ENST00000360093 SMR3BP02814 79 aaPredicted RBP3.07□□□□□ -1.92
SCN3A-202ENST00000360093 TNP2Q05952 138 aa3.07□□□□□ -1.92
SCN3A-202ENST00000360093 UQCR11O14957 56 aa3.07□□□□□ -1.92
SCN3A-202ENST00000360093 FAM104AQ969W3 186 aa3.07□□□□□ -1.92
SCN3A-202ENST00000360093 COX6B2Q6YFQ2 88 aa3.07□□□□□ -1.92
SCN3A-202ENST00000360093 CDH23Q9H251 3354 aa3.06□□□□□ -1.92
SCN3A-202ENST00000360093 SPRR1AP35321 89 aa3.06□□□□□ -1.92
SCN3A-202ENST00000360093 TEX15Q9BXT5 2789 aa3.06□□□□□ -1.92
SCN3A-202ENST00000360093 WDFY4Q6ZS81 3184 aa3.05□□□□□ -1.92
SCN3A-202ENST00000360093 AKAP13Q12802 2813 aa3.05□□□□□ -1.92
SCN3A-202ENST00000360093 ANAPC11Q9NYG5 84 aa3.05□□□□□ -1.92
SCN3A-202ENST00000360093 C9orf92A6NGG3 77 aa3.05□□□□□ -1.92
SCN3A-202ENST00000360093 XIRP2A4UGR9 3374 aa3.05□□□□□ -1.92
SCN3A-202ENST00000360093 VPS13AQ96RL7 3174 aa3.04□□□□□ -1.92
SCN3A-202ENST00000360093 A0A0C4DFX4 3053 aa3.04□□□□□ -1.92
SCN3A-202ENST00000360093 A8MUN3 132 aa3.04□□□□□ -1.92
SCN3A-202ENST00000360093 IGSF10Q6WRI0 2623 aa3.04□□□□□ -1.92
SCN3A-202ENST00000360093 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.04□□□□□ -1.92
SCN3A-202ENST00000360093 CHD6Q8TD26 2715 aa3.04□□□□□ -1.92
SCN3A-202ENST00000360093 H7BZZ5 65 aa3.03□□□□□ -1.92
SCN3A-202ENST00000360093 C4orf26Q17RF5 130 aa3.03□□□□□ -1.92
SCN3A-202ENST00000360093 TRIOO75962 3097 aa3.03□□□□□ -1.92
SCN3A-202ENST00000360093 SPRR1BP22528 89 aa3.03□□□□□ -1.92
SCN3A-202ENST00000360093 DSPP15924 2871 aaKnown RBP3.03□□□□□ -1.92
SCN3A-202ENST00000360093 A0A0G2JQZ4 141 aa3.02□□□□□ -1.93
SCN3A-202ENST00000360093 TEP1Q99973 2627 aaKnown RBP3.02□□□□□ -1.93
SCN3A-202ENST00000360093 IGLV8-61A0A075B6I0 122 aa3.02□□□□□ -1.93
SCN3A-202ENST00000360093 OCR1Q9BZK8 76 aa3.01□□□□□ -1.93
SCN3A-202ENST00000360093 MIR22HGQ0VDD5 57 aa3.01□□□□□ -1.93
SCN3A-202ENST00000360093 ITPR2Q14571 2701 aa3.01□□□□□ -1.93
SCN3A-202ENST00000360093 IGLV7-46A0A075B6I9 117 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms