RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 Q8NAQ8 132 aa4.4□□□□□ -1.71
CSDE1-203ENST00000358528 H7BZZ5 65 aa4.39□□□□□ -1.71
CSDE1-203ENST00000358528 DEFB116Q30KQ4 102 aa4.39□□□□□ -1.71
CSDE1-203ENST00000358528 LINC00612Q8N6U2 182 aa4.39□□□□□ -1.71
CSDE1-203ENST00000358528 TRBV7-6A0A0J9YX20 115 aa4.39□□□□□ -1.71
CSDE1-203ENST00000358528 CXCL6P80162 114 aa4.39□□□□□ -1.71
CSDE1-203ENST00000358528 LINC00474Q9P2X8 69 aa4.39□□□□□ -1.71
CSDE1-203ENST00000358528 A0A096LNI7 61 aa4.39□□□□□ -1.71
CSDE1-203ENST00000358528 ELOF1P60002 83 aaKnown RBP4.39□□□□□ -1.71
CSDE1-203ENST00000358528 HIGD2AQ9BW72 106 aa4.39□□□□□ -1.71
CSDE1-203ENST00000358528 SMIM26A0A096LP01 95 aa4.38□□□□□ -1.71
CSDE1-203ENST00000358528 VPREB1P12018 145 aa4.38□□□□□ -1.71
CSDE1-203ENST00000358528 KRTAP1-1Q07627 177 aa4.38□□□□□ -1.71
CSDE1-203ENST00000358528 Q6ZRP5 223 aa4.38□□□□□ -1.71
CSDE1-203ENST00000358528 ESRGQ1W209 222 aa4.37□□□□□ -1.71
CSDE1-203ENST00000358528 C11orf45Q8TAV5 145 aa4.37□□□□□ -1.71
CSDE1-203ENST00000358528 PSCAO43653 123 aa4.37□□□□□ -1.71
CSDE1-203ENST00000358528 WFDC13Q8IUB5 93 aa4.37□□□□□ -1.71
CSDE1-203ENST00000358528 NBEAL1Q6ZS30 2694 aa4.37□□□□□ -1.71
CSDE1-203ENST00000358528 PRYO14603 147 aa4.37□□□□□ -1.71
CSDE1-203ENST00000358528 C1orf137Q5JT78 98 aa4.37□□□□□ -1.71
CSDE1-203ENST00000358528 C7orf33Q8WU49 177 aa4.36□□□□□ -1.71
CSDE1-203ENST00000358528 STAB1Q9NY15 2570 aa4.36□□□□□ -1.71
CSDE1-203ENST00000358528 SMIM29Q86T20 159 aa4.36□□□□□ -1.71
CSDE1-203ENST00000358528 ST20-AS1Q8NBB2 130 aa4.36□□□□□ -1.71
CSDE1-203ENST00000358528 A0A0G2JQZ4 141 aa4.36□□□□□ -1.71
CSDE1-203ENST00000358528 A0A1W2PNN7 141 aa4.36□□□□□ -1.71
CSDE1-203ENST00000358528 NDUFC1O43677 76 aa4.36□□□□□ -1.71
CSDE1-203ENST00000358528 MGAM2Q2M2H8 2515 aa4.36□□□□□ -1.71
CSDE1-203ENST00000358528 LINC00336Q6ZUF6 198 aa4.36□□□□□ -1.71
CSDE1-203ENST00000358528 PRR34Q9NV39 138 aa4.36□□□□□ -1.71
CSDE1-203ENST00000358528 COL6A5A8TX70 2615 aa4.35□□□□□ -1.71
CSDE1-203ENST00000358528 TRBV7-4A0A0J9YYF1 115 aa4.35□□□□□ -1.71
CSDE1-203ENST00000358528 FAM168BA1KXE4 195 aa4.35□□□□□ -1.71
CSDE1-203ENST00000358528 SERTAD4-AS1Q5TG53 156 aa4.35□□□□□ -1.71
CSDE1-203ENST00000358528 KLKP1Q107X0 134 aa4.35□□□□□ -1.71
CSDE1-203ENST00000358528 Q5XG85 94 aa4.35□□□□□ -1.71
CSDE1-203ENST00000358528 LINC00528Q8N1L1 170 aa4.35□□□□□ -1.71
CSDE1-203ENST00000358528 TENM1Q9UKZ4 2725 aa4.34□□□□□ -1.71
CSDE1-203ENST00000358528 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.34□□□□□ -1.71
CSDE1-203ENST00000358528 NBPF19A0A087WUL8 3843 aa4.34□□□□□ -1.71
CSDE1-203ENST00000358528 C15orf56Q8N910 161 aa4.34□□□□□ -1.72
CSDE1-203ENST00000358528 PDZD2O15018 2839 aa4.33□□□□□ -1.72
CSDE1-203ENST00000358528 GVQW2A0A096LPI5 108 aaPredicted RBP4.33□□□□□ -1.72
CSDE1-203ENST00000358528 UBE2DNLQ8IWF7 75 aa4.33□□□□□ -1.72
CSDE1-203ENST00000358528 DHRS4-AS1Q9P1J3 65 aa4.33□□□□□ -1.72
CSDE1-203ENST00000358528 IGKV4-1P06312 121 aa4.32□□□□□ -1.72
CSDE1-203ENST00000358528 PRLHP81277 87 aa4.32□□□□□ -1.72
CSDE1-203ENST00000358528 Q8N377 158 aa4.32□□□□□ -1.72
CSDE1-203ENST00000358528 PKD1L1Q8TDX9 2849 aa4.32□□□□□ -1.72
CSDE1-203ENST00000358528 PSPHP1O15172 72 aa4.31□□□□□ -1.72
CSDE1-203ENST00000358528 BCE1O60756 84 aa4.31□□□□□ -1.72
CSDE1-203ENST00000358528 ZNF469Q96JG9 3925 aaPredicted RBP4.31□□□□□ -1.72
CSDE1-203ENST00000358528 ATP5EP56381 51 aaPredicted RBP4.31□□□□□ -1.72
CSDE1-203ENST00000358528 NSD1Q96L73 2696 aaPredicted RBP4.31□□□□□ -1.72
CSDE1-203ENST00000358528 MP68P56378 58 aa4.31□□□□□ -1.72
CSDE1-203ENST00000358528 A0A087WSZ3 146 aa4.31□□□□□ -1.72
CSDE1-203ENST00000358528 UBE2AP49459 152 aa4.3□□□□□ -1.72
CSDE1-203ENST00000358528 CASC10Q5T4H9 136 aa4.3□□□□□ -1.72
CSDE1-203ENST00000358528 PRO0628Q9UI54 55 aa4.3□□□□□ -1.72
CSDE1-203ENST00000358528 TENM4Q6N022 2769 aa4.3□□□□□ -1.72
CSDE1-203ENST00000358528 H0Y9J4 135 aa4.3□□□□□ -1.72
CSDE1-203ENST00000358528 MRPL55Q7Z7F7 128 aaKnown RBP4.3□□□□□ -1.72
CSDE1-203ENST00000358528 LINC00208Q96KT6 92 aa4.3□□□□□ -1.72
CSDE1-203ENST00000358528 K7EQZ3 153 aa4.29□□□□□ -1.72
CSDE1-203ENST00000358528 Q6ZRX8 168 aa4.29□□□□□ -1.72
CSDE1-203ENST00000358528 ERC2-IT1O76042 136 aa4.29□□□□□ -1.72
CSDE1-203ENST00000358528 A0A1W2PNM2 257 aa4.29□□□□□ -1.72
CSDE1-203ENST00000358528 RPL37AP61513 92 aaKnown RBP4.29□□□□□ -1.72
CSDE1-203ENST00000358528 FAM229BQ4G0N7 80 aa4.29□□□□□ -1.72
CSDE1-203ENST00000358528 LINC01556Q5JQF7 62 aa4.29□□□□□ -1.72
CSDE1-203ENST00000358528 FP248Q71RG6 208 aaPredicted RBP4.29□□□□□ -1.72
CSDE1-203ENST00000358528 REG3GQ6UW15 175 aa4.28□□□□□ -1.72
CSDE1-203ENST00000358528 NDUFS5O43920 106 aa4.28□□□□□ -1.72
CSDE1-203ENST00000358528 Q8NBF4 154 aa4.28□□□□□ -1.72
CSDE1-203ENST00000358528 KMT2BQ9UMN6 2715 aaPredicted RBP4.28□□□□□ -1.72
CSDE1-203ENST00000358528 TENM3Q9P273 2699 aa4.27□□□□□ -1.73
CSDE1-203ENST00000358528 KCNQ1DNQ9H478 68 aa4.27□□□□□ -1.73
CSDE1-203ENST00000358528 C1orf195Q5TG92 126 aa4.27□□□□□ -1.73
CSDE1-203ENST00000358528 LINC00476Q8WZB0 136 aa4.27□□□□□ -1.73
CSDE1-203ENST00000358528 AKAP9Q99996 3911 aa4.27□□□□□ -1.73
CSDE1-203ENST00000358528 KRTAP10-11P60412 298 aa4.27□□□□□ -1.73
CSDE1-203ENST00000358528 HCG22E2RYF7 251 aa4.26□□□□□ -1.73
CSDE1-203ENST00000358528 Q9BRP9 147 aa4.26□□□□□ -1.73
CSDE1-203ENST00000358528 OCR1Q9BZK8 76 aa4.26□□□□□ -1.73
CSDE1-203ENST00000358528 LINC00588Q9Y4M8 146 aa4.26□□□□□ -1.73
CSDE1-203ENST00000358528 OTOGQ6ZRI0 2925 aa4.25□□□□□ -1.73
CSDE1-203ENST00000358528 EPM2AB3EWF7 344 aa4.25□□□□□ -1.73
CSDE1-203ENST00000358528 IGLV1-50A0A075B6I6 118 aa4.25□□□□□ -1.73
CSDE1-203ENST00000358528 SPTSSBQ8NFR3 76 aa4.24□□□□□ -1.73
CSDE1-203ENST00000358528 FBN1P35555 2871 aaKnown RBP4.24□□□□□ -1.73
CSDE1-203ENST00000358528 CHTF8P0CG12 524 aa4.24□□□□□ -1.73
CSDE1-203ENST00000358528 C1orf64Q8NEQ6 169 aa4.24□□□□□ -1.73
CSDE1-203ENST00000358528 IGLV9-49A0A0B4J1Y8 123 aa4.23□□□□□ -1.73
CSDE1-203ENST00000358528 H3BNG1 76 aa4.23□□□□□ -1.73
CSDE1-203ENST00000358528 KRTAP26-1Q6PEX3 210 aa4.23□□□□□ -1.73
CSDE1-203ENST00000358528 CASC2Q6XLA1 102 aa4.23□□□□□ -1.73
CSDE1-203ENST00000358528 CDK2AP2O75956 126 aa4.23□□□□□ -1.73
CSDE1-203ENST00000358528 PCOTHQ58A44 107 aa4.23□□□□□ -1.73
CSDE1-203ENST00000358528 IGLV5-48A0A075B6I7 105 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms