RNA–Protein interactions for RNA: ENST00000357517.6

PCDH1-202, Transcript of protocadherin 1, humanhuman

TSL 2

Gene PCDH1, Length 3,307 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-202ENST00000357517 PRAC1Q96KF2 57 aa6.97□□□□□ -1.29
PCDH1-202ENST00000357517 CCL24O00175 119 aa6.96□□□□□ -1.29
PCDH1-202ENST00000357517 IGLV6-57P01721 117 aa6.96□□□□□ -1.29
PCDH1-202ENST00000357517 A0A0G2JQZ4 141 aa6.96□□□□□ -1.3
PCDH1-202ENST00000357517 A0A1W2PNN7 141 aa6.96□□□□□ -1.3
PCDH1-202ENST00000357517 FAM208BQ5VWN6 2430 aa6.96□□□□□ -1.3
PCDH1-202ENST00000357517 IGHV4-31P0DP07 118 aa6.96□□□□□ -1.3
PCDH1-202ENST00000357517 REG3AQ06141 175 aa6.96□□□□□ -1.3
PCDH1-202ENST00000357517 COX17Q14061 63 aa6.96□□□□□ -1.3
PCDH1-202ENST00000357517 DEFB114Q30KQ6 69 aa6.96□□□□□ -1.3
PCDH1-202ENST00000357517 Q8N9P0 234 aaPredicted RBP6.96□□□□□ -1.3
PCDH1-202ENST00000357517 SERTAD4-AS1Q5TG53 156 aa6.95□□□□□ -1.3
PCDH1-202ENST00000357517 B4DSR2 109 aa6.94□□□□□ -1.3
PCDH1-202ENST00000357517 DEFB4AO15263 64 aa6.94□□□□□ -1.3
PCDH1-202ENST00000357517 IGHV4-30-2A0A087WSY4 118 aa6.93□□□□□ -1.3
PCDH1-202ENST00000357517 LIMD2Q9BT23 127 aa6.93□□□□□ -1.3
PCDH1-202ENST00000357517 HIVEP2P31629 2446 aa6.93□□□□□ -1.3
PCDH1-202ENST00000357517 MP68P56378 58 aa6.93□□□□□ -1.3
PCDH1-202ENST00000357517 SPAG11AQ6PDA7 123 aa6.92□□□□□ -1.3
PCDH1-202ENST00000357517 UNC79Q9P2D8 2635 aa6.92□□□□□ -1.3
PCDH1-202ENST00000357517 ELOF1P60002 83 aaKnown RBP6.91□□□□□ -1.3
PCDH1-202ENST00000357517 KPRPQ5T749 579 aaPredicted RBP6.91□□□□□ -1.3
PCDH1-202ENST00000357517 UBR5O95071 2799 aaPredicted RBP6.91□□□□□ -1.3
PCDH1-202ENST00000357517 HTN3P15516 51 aa6.91□□□□□ -1.3
PCDH1-202ENST00000357517 MSMBP08118 114 aa6.91□□□□□ -1.3
PCDH1-202ENST00000357517 ABCA12Q86UK0 2595 aa6.91□□□□□ -1.3
PCDH1-202ENST00000357517 ZCCHC13Q8WW36 166 aaKnown RBP6.9□□□□□ -1.3
PCDH1-202ENST00000357517 C16orf74Q96GX8 76 aa6.9□□□□□ -1.31
PCDH1-202ENST00000357517 MYO18BQ8IUG5 2567 aa6.89□□□□□ -1.31
PCDH1-202ENST00000357517 CYP4F30PQ9H0H9 118 aa6.89□□□□□ -1.31
PCDH1-202ENST00000357517 A0A1W2PNM2 257 aa6.88□□□□□ -1.31
PCDH1-202ENST00000357517 VPREB1P12018 145 aa6.88□□□□□ -1.31
PCDH1-202ENST00000357517 DSCR10P59022 87 aa6.88□□□□□ -1.31
PCDH1-202ENST00000357517 RPL37AP61513 92 aaKnown RBP6.88□□□□□ -1.31
PCDH1-202ENST00000357517 MOBPQ13875 183 aa6.88□□□□□ -1.31
PCDH1-202ENST00000357517 H3BQ85 93 aa6.88□□□□□ -1.31
PCDH1-202ENST00000357517 LINC01554Q52M75 96 aa6.88□□□□□ -1.31
PCDH1-202ENST00000357517 C1orf137Q5JT78 98 aa6.88□□□□□ -1.31
PCDH1-202ENST00000357517 ADM2Q7Z4H4 148 aa6.88□□□□□ -1.31
PCDH1-202ENST00000357517 C6orf48Q9UBA6 75 aa6.88□□□□□ -1.31
PCDH1-202ENST00000357517 NDUFB1O75438 58 aa6.87□□□□□ -1.31
PCDH1-202ENST00000357517 LINC00313P59037 77 aa6.87□□□□□ -1.31
PCDH1-202ENST00000357517 BAHCC1Q9P281 2608 aa6.87□□□□□ -1.31
PCDH1-202ENST00000357517 FLNCQ14315 2725 aa6.87□□□□□ -1.31
PCDH1-202ENST00000357517 OTOGQ6ZRI0 2925 aa6.86□□□□□ -1.31
PCDH1-202ENST00000357517 IGHV4-30-4P0DP06 118 aa6.86□□□□□ -1.31
PCDH1-202ENST00000357517 PCOTHQ58A44 107 aa6.86□□□□□ -1.31
PCDH1-202ENST00000357517 GIG44P09565 113 aaPredicted RBP6.86□□□□□ -1.31
PCDH1-202ENST00000357517 RPL37AP8A6NKH3 93 aa6.86□□□□□ -1.31
PCDH1-202ENST00000357517 Q8N377 158 aa6.86□□□□□ -1.31
PCDH1-202ENST00000357517 CDC42SE1Q9NRR8 79 aa6.86□□□□□ -1.31
PCDH1-202ENST00000357517 CAMK2N2Q96S95 79 aa6.85□□□□□ -1.31
PCDH1-202ENST00000357517 A0A1B0GUV1 79 aa6.85□□□□□ -1.31
PCDH1-202ENST00000357517 LINC00528Q8N1L1 170 aa6.85□□□□□ -1.31
PCDH1-202ENST00000357517 ZNF702PQ9H963 129 aa6.85□□□□□ -1.31
PCDH1-202ENST00000357517 NOTCH2Q04721 2471 aa6.85□□□□□ -1.31
PCDH1-202ENST00000357517 H0Y9P7 68 aa6.84□□□□□ -1.31
PCDH1-202ENST00000357517 CCL19Q99731 98 aa6.84□□□□□ -1.31
PCDH1-202ENST00000357517 SPINK7P58062 85 aa6.83□□□□□ -1.32
PCDH1-202ENST00000357517 COA5Q86WW8 74 aa6.83□□□□□ -1.32
PCDH1-202ENST00000357517 Q75L30 129 aa6.82□□□□□ -1.32
PCDH1-202ENST00000357517 LCE6AA0A183 80 aa6.82□□□□□ -1.32
PCDH1-202ENST00000357517 LOC101927531A0A1B0GV80 90 aa6.82□□□□□ -1.32
PCDH1-202ENST00000357517 C7orf33Q8WU49 177 aa6.81□□□□□ -1.32
PCDH1-202ENST00000357517 PRO0255Q9UI72 69 aa6.81□□□□□ -1.32
PCDH1-202ENST00000357517 DSCR9P59020 149 aa6.8□□□□□ -1.32
PCDH1-202ENST00000357517 ACANP16112 2415 aa6.79□□□□□ -1.32
PCDH1-202ENST00000357517 DOPEY1Q5JWR5 2465 aa6.78□□□□□ -1.32
PCDH1-202ENST00000357517 IGLV1-51P01701 117 aa6.78□□□□□ -1.32
PCDH1-202ENST00000357517 Q8NBF4 154 aa6.78□□□□□ -1.32
PCDH1-202ENST00000357517 FASNP49327 2511 aaKnown RBP6.77□□□□□ -1.33
PCDH1-202ENST00000357517 A0A087WSZ3 146 aa6.77□□□□□ -1.33
PCDH1-202ENST00000357517 CASC2Q6XLA1 102 aa6.77□□□□□ -1.33
PCDH1-202ENST00000357517 C4orf3Q8WVX3 66 aa6.77□□□□□ -1.33
PCDH1-202ENST00000357517 CSNK1G2-AS1Q8NCQ2 148 aa6.76□□□□□ -1.33
PCDH1-202ENST00000357517 ZNF706Q9Y5V0 76 aaPredicted RBP6.75□□□□□ -1.33
PCDH1-202ENST00000357517 IGLV5-48A0A075B6I7 105 aa6.74□□□□□ -1.33
PCDH1-202ENST00000357517 A0A096LNI7 61 aa6.74□□□□□ -1.33
PCDH1-202ENST00000357517 PDZD2O15018 2839 aa6.74□□□□□ -1.33
PCDH1-202ENST00000357517 OXLD1Q5BKU9 147 aa6.73□□□□□ -1.33
PCDH1-202ENST00000357517 Q8NAQ8 132 aa6.73□□□□□ -1.33
PCDH1-202ENST00000357517 KCNQ1DNQ9H478 68 aa6.73□□□□□ -1.33
PCDH1-202ENST00000357517 SRRM2Q9UQ35 2752 aaKnown RBP6.73□□□□□ -1.33
PCDH1-202ENST00000357517 RETNLBQ9BQ08 111 aa6.73□□□□□ -1.33
PCDH1-202ENST00000357517 IGKV2D-24A0A075B6R9 120 aa6.71□□□□□ -1.33
PCDH1-202ENST00000357517 USP24Q9UPU5 2620 aa6.71□□□□□ -1.33
PCDH1-202ENST00000357517 IGSF10Q6WRI0 2623 aa6.71□□□□□ -1.34
PCDH1-202ENST00000357517 FAM168BA1KXE4 195 aa6.71□□□□□ -1.34
PCDH1-202ENST00000357517 H0Y9J4 135 aa6.71□□□□□ -1.34
PCDH1-202ENST00000357517 DEFB135Q30KP9 77 aa6.71□□□□□ -1.34
PCDH1-202ENST00000357517 Q9BRP9 147 aa6.71□□□□□ -1.34
PCDH1-202ENST00000357517 PKD1L1Q8TDX9 2849 aa6.7□□□□□ -1.34
PCDH1-202ENST00000357517 LINC00476Q8WZB0 136 aa6.7□□□□□ -1.34
PCDH1-202ENST00000357517 Q6YL49 198 aa6.7□□□□□ -1.34
PCDH1-202ENST00000357517 CSMD3Q7Z407 3707 aa6.69□□□□□ -1.34
PCDH1-202ENST00000357517 SPANXA2-OT1Q8N9U9 137 aa6.68□□□□□ -1.34
PCDH1-202ENST00000357517 HIVEP1P15822 2718 aa6.67□□□□□ -1.34
PCDH1-202ENST00000357517 EGFEM1PQ0D2K5 195 aa6.66□□□□□ -1.34
PCDH1-202ENST00000357517 Q6ZRX8 168 aa6.66□□□□□ -1.34
PCDH1-202ENST00000357517 HELZ2Q9BYK8 2649 aaKnown RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms