RNA–Protein interactions for RNA: ENST00000357058.7

RNF38-204, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-204ENST00000357058 FAM104AQ969W3 186 aa13.29□□□□□ -0.28
RNF38-204ENST00000357058 WIPF1O43516 503 aa13.28□□□□□ -0.28
RNF38-204ENST00000357058 SPEGQ15772 3267 aa13.28□□□□□ -0.28
RNF38-204ENST00000357058 HCG22E2RYF7 251 aa13.28□□□□□ -0.28
RNF38-204ENST00000357058 KCNQ1DNQ9H478 68 aa13.28□□□□□ -0.28
RNF38-204ENST00000357058 ATMQ13315 3056 aa13.28□□□□□ -0.28
RNF38-204ENST00000357058 MOBPQ13875 183 aa13.27□□□□□ -0.28
RNF38-204ENST00000357058 C9orf129Q5T035 196 aaKnown RBP13.27□□□□□ -0.29
RNF38-204ENST00000357058 TEP1Q99973 2627 aaKnown RBP13.26□□□□□ -0.29
RNF38-204ENST00000357058 Q8NBF4 154 aa13.26□□□□□ -0.29
RNF38-204ENST00000357058 FLNCQ14315 2725 aa13.25□□□□□ -0.29
RNF38-204ENST00000357058 LINC00528Q8N1L1 170 aa13.24□□□□□ -0.29
RNF38-204ENST00000357058 BCE1O60756 84 aa13.24□□□□□ -0.29
RNF38-204ENST00000357058 CASC10Q5T4H9 136 aa13.24□□□□□ -0.29
RNF38-204ENST00000357058 A0A1B0GW54 56 aa13.22□□□□□ -0.29
RNF38-204ENST00000357058 FREM2Q5SZK8 3169 aa13.22□□□□□ -0.29
RNF38-204ENST00000357058 APLNQ9ULZ1 77 aa13.22□□□□□ -0.29
RNF38-204ENST00000357058 ADGRG4Q8IZF6 3080 aa13.21□□□□□ -0.29
RNF38-204ENST00000357058 TLX1NBP0CAT3 122 aa13.19□□□□□ -0.3
RNF38-204ENST00000357058 TEX15Q9BXT5 2789 aa13.19□□□□□ -0.3
RNF38-204ENST00000357058 SEC61GP60059 68 aa13.19□□□□□ -0.3
RNF38-204ENST00000357058 TMEM254Q8TBM7 123 aa13.19□□□□□ -0.3
RNF38-204ENST00000357058 CHD6Q8TD26 2715 aa13.19□□□□□ -0.3
RNF38-204ENST00000357058 SMIM29Q86T20 159 aa13.18□□□□□ -0.3
RNF38-204ENST00000357058 NBEAQ8NFP9 2946 aa13.18□□□□□ -0.3
RNF38-204ENST00000357058 LIMD2Q9BT23 127 aa13.17□□□□□ -0.3
RNF38-204ENST00000357058 H0Y9P7 68 aa13.16□□□□□ -0.3
RNF38-204ENST00000357058 RETNLBQ9BQ08 111 aa13.15□□□□□ -0.3
RNF38-204ENST00000357058 BRK1Q8WUW1 75 aa13.14□□□□□ -0.31
RNF38-204ENST00000357058 PLA2G2DQ9UNK4 145 aa13.13□□□□□ -0.31
RNF38-204ENST00000357058 A0A087WTM6 91 aa13.13□□□□□ -0.31
RNF38-204ENST00000357058 DMXL1Q9Y485 3027 aa13.13□□□□□ -0.31
RNF38-204ENST00000357058 C9orf163Q8N9P6 203 aa13.13□□□□□ -0.31
RNF38-204ENST00000357058 COL12A1Q99715 3063 aa13.12□□□□□ -0.31
RNF38-204ENST00000357058 PCOTHQ58A44 107 aa13.11□□□□□ -0.31
RNF38-204ENST00000357058 TRBV7-4A0A0J9YYF1 115 aa13.09□□□□□ -0.31
RNF38-204ENST00000357058 LRBAP50851 2863 aa13.08□□□□□ -0.32
RNF38-204ENST00000357058 SPACA4Q8TDM5 124 aa13.08□□□□□ -0.32
RNF38-204ENST00000357058 SERP1Q9Y6X1 66 aa13.08□□□□□ -0.32
RNF38-204ENST00000357058 V9GYY9 64 aa13.07□□□□□ -0.32
RNF38-204ENST00000357058 SETXQ7Z333 2677 aaKnown RBP13.07□□□□□ -0.32
RNF38-204ENST00000357058 Q8N377 158 aa13.06□□□□□ -0.32
RNF38-204ENST00000357058 A0A1W2PNN7 141 aa13.06□□□□□ -0.32
RNF38-204ENST00000357058 CRYGAP11844 174 aa13.06□□□□□ -0.32
RNF38-204ENST00000357058 CNBPP62633 177 aaKnown RBP13.06□□□□□ -0.32
RNF38-204ENST00000357058 USP34Q70CQ2 3546 aa13.05□□□□□ -0.32
RNF38-204ENST00000357058 hDV103S1A0JD37 113 aa13.04□□□□□ -0.32
RNF38-204ENST00000357058 COL6A5A8TX70 2615 aa13.04□□□□□ -0.32
RNF38-204ENST00000357058 RPL37AP61513 92 aaKnown RBP13.03□□□□□ -0.32
RNF38-204ENST00000357058 SMIM26A0A096LP01 95 aa13.03□□□□□ -0.32
RNF38-204ENST00000357058 GCN1Q92616 2671 aaKnown RBP13.02□□□□□ -0.32
RNF38-204ENST00000357058 KALRNO60229 2985 aa13.02□□□□□ -0.33
RNF38-204ENST00000357058 C1orf64Q8NEQ6 169 aa13.02□□□□□ -0.33
RNF38-204ENST00000357058 IGFL1Q6UW32 110 aa13□□□□□ -0.33
RNF38-204ENST00000357058 SVIPQ8NHG7 77 aa12.99□□□□□ -0.33
RNF38-204ENST00000357058 TYMSOSQ8TAI1 123 aa12.98□□□□□ -0.33
RNF38-204ENST00000357058 MYO15AQ9UKN7 3530 aa12.98□□□□□ -0.33
RNF38-204ENST00000357058 STAB1Q9NY15 2570 aa12.97□□□□□ -0.33
RNF38-204ENST00000357058 SPTSSBQ8NFR3 76 aa12.96□□□□□ -0.33
RNF38-204ENST00000357058 PRR15LQ9BU68 103 aa12.96□□□□□ -0.33
RNF38-204ENST00000357058 ERC2-IT1O76042 136 aa12.96□□□□□ -0.34
RNF38-204ENST00000357058 ZNF861PO60384 105 aa12.95□□□□□ -0.34
RNF38-204ENST00000357058 TP53AIP1Q9HCN2 124 aa12.95□□□□□ -0.34
RNF38-204ENST00000357058 ITPR1Q14643 2758 aa12.94□□□□□ -0.34
RNF38-204ENST00000357058 A0A0G2JQZ4 141 aa12.94□□□□□ -0.34
RNF38-204ENST00000357058 IGLV5-37A0A075B6J1 123 aa12.93□□□□□ -0.34
RNF38-204ENST00000357058 FAM229AH3BQW9 127 aa12.93□□□□□ -0.34
RNF38-204ENST00000357058 K7EQZ3 153 aa12.93□□□□□ -0.34
RNF38-204ENST00000357058 UBR5O95071 2799 aaPredicted RBP12.92□□□□□ -0.34
RNF38-204ENST00000357058 NOTCH1P46531 2555 aa12.91□□□□□ -0.34
RNF38-204ENST00000357058 UTP20O75691 2785 aaKnown RBP12.9□□□□□ -0.34
RNF38-204ENST00000357058 LOC400499M0QZD8 3231 aa12.9□□□□□ -0.34
RNF38-204ENST00000357058 A8MWP4 228 aa12.9□□□□□ -0.35
RNF38-204ENST00000357058 BAHCC1Q9P281 2608 aa12.89□□□□□ -0.35
RNF38-204ENST00000357058 PLA2G1BP04054 148 aaKnown RBP12.89□□□□□ -0.35
RNF38-204ENST00000357058 ZZEF1O43149 2961 aa12.89□□□□□ -0.35
RNF38-204ENST00000357058 IGKV2D-30A0A075B6S6 120 aa12.88□□□□□ -0.35
RNF38-204ENST00000357058 IGKV2-30P06310 120 aa12.88□□□□□ -0.35
RNF38-204ENST00000357058 PSORS1C2Q9UIG4 136 aa12.88□□□□□ -0.35
RNF38-204ENST00000357058 A6NED7 52 aa12.88□□□□□ -0.35
RNF38-204ENST00000357058 TACC2O95359 2948 aa12.88□□□□□ -0.35
RNF38-204ENST00000357058 LINC00313P59037 77 aa12.86□□□□□ -0.35
RNF38-204ENST00000357058 NBEAL2Q6ZNJ1 2754 aa12.86□□□□□ -0.35
RNF38-204ENST00000357058 K7ERS5 55 aa12.84□□□□□ -0.35
RNF38-204ENST00000357058 ANAPC11Q9NYG5 84 aa12.84□□□□□ -0.35
RNF38-204ENST00000357058 TRAV22A0A0B4J277 110 aa12.82□□□□□ -0.36
RNF38-204ENST00000357058 OBSCN-AS1Q96MR7 158 aa12.82□□□□□ -0.36
RNF38-204ENST00000357058 LINC01600Q96MT4 127 aa12.82□□□□□ -0.36
RNF38-204ENST00000357058 Q8NDZ9 215 aa12.82□□□□□ -0.36
RNF38-204ENST00000357058 IGLV7-43P04211 117 aa12.82□□□□□ -0.36
RNF38-204ENST00000357058 A0A1W2PNM2 257 aa12.81□□□□□ -0.36
RNF38-204ENST00000357058 A0A0U1RQV1 116 aa12.8□□□□□ -0.36
RNF38-204ENST00000357058 SPRR4Q96PI1 79 aa12.79□□□□□ -0.36
RNF38-204ENST00000357058 H3BPC8 53 aa12.79□□□□□ -0.36
RNF38-204ENST00000357058 SPINK1P00995 79 aa12.79□□□□□ -0.36
RNF38-204ENST00000357058 TNP2Q05952 138 aa12.79□□□□□ -0.36
RNF38-204ENST00000357058 SSBP3-AS1Q7Z2R9 100 aa12.78□□□□□ -0.36
RNF38-204ENST00000357058 ITPR2Q14571 2701 aa12.78□□□□□ -0.36
RNF38-204ENST00000357058 IGLV5-48A0A075B6I7 105 aa12.76□□□□□ -0.37
RNF38-204ENST00000357058 PRR15Q8IV56 129 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms